| Next changeset 1:71f649c23021 (2018-01-25) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc-tools/fasplit commit 8b84c1739e31ab884b81e214d72a65f030a5e950 |
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added:
fasplit.xml test-data/0.fa test-data/1.fa test-data/2.fa test-data/3.fa test-data/4.fa test-data/CDS.fa test-data/ENSCAFT00000022939_canisfamiliaris.fa test-data/ENSCAFT00000022963_canisfamiliaris.fa test-data/ENSCAFT00000025950_canisfamiliaris.fa test-data/ENSMUST00000026013_musmusculus.fa test-data/ENSMUST00000040820_musmusculus.fa test-data/ENSMUST00000041588_musmusculus.fa test-data/ENSMUST00000091291_musmusculus.fa test-data/ENSMUST00000100505_musmusculus.fa test-data/ENSMUST00000110806_musmusculus.fa test-data/ENSMUST00000153440_musmusculus.fa test-data/ENSMUST00000163344_musmusculus.fa test-data/ENSMUST00000168613_musmusculus.fa test-data/ENSMUST00000173143_musmusculus.fa test-data/ENSMUST00000207100_musmusculus.fa test-data/ENSMUST00000208839_musmusculus.fa test-data/ENSPTRT00000019089_pantroglodytes.fa test-data/ENSPTRT00000034846_pantroglodytes.fa test-data/ENSPTRT00000040520_pantroglodytes.fa test-data/ENSPTRT00000040521_pantroglodytes.fa test-data/ENSRNOT00000041155_rattusnorvegicus.fa test-data/ENSRNOT00000044009_rattusnorvegicus.fa test-data/ENSRNOT00000064726_rattusnorvegicus.fa test-data/ENSRNOT00000066674_rattusnorvegicus.fa test-data/ENSRNOT00000067448_rattusnorvegicus.fa test-data/ENSSSCT00000008295_susscrofa.fa test-data/ENSSSCT00000013404_susscrofa.fa test-data/ENSSSCT00000014817_susscrofa.fa test-data/ENSSSCT00000023183_susscrofa.fa test-data/ENSSSCT00000032764_susscrofa.fa test-data/ENSSSCT00000033745_susscrofa.fa test-data/ENSSSCT00000035258_susscrofa.fa test-data/ENST00000302850_homosapiens.fa test-data/ENST00000338702_homosapiens.fa test-data/ENST00000340611_homosapiens.fa test-data/ENST00000341500_homosapiens.fa test-data/ENST00000378069_homosapiens.fa test-data/ENST00000421712_homosapiens.fa test-data/ENST00000542639_homosapiens.fa test-data/ENST00000600492_homosapiens.fa |
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| diff -r 000000000000 -r dc36d50254d8 fasplit.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fasplit.xml Wed Sep 13 17:53:57 2017 -0400 |
| [ |
| @@ -0,0 +1,114 @@ +<tool id="fasplit" name="faSplit" version="@WRAPPER_VERSION@"> + <description>Split a FASTA file</description> + <macros> + <token name="@WRAPPER_VERSION@">332</token> + </macros> + <requirements> + <requirement type="package" version="@WRAPPER_VERSION@">ucsc-fasplit</requirement> + </requirements> + <command detect_errors="exit_code"><![CDATA[ +mkdir out && +faSplit +$O.split_type +'$input' +#if $O.split_type != 'byname' + $O.count +#end if +out/ + ]]></command> + <inputs> + <param name="input" type="data" format="fasta" label="FASTA file" /> + <conditional name="O"> + <param name="split_type" type="select" label="Split by:"> + <option value="sequence" selected="true">Number of files (for multi sequence FASTA)</option> + <option value="base">Number of files (for single sequence FASTA)</option> + <option value="size">Number of base (for single sequence FASTA)</option> + <option value="byname">By name</option> + </param> + <when value="sequence"> + <param name="count" type="integer" value="10" label="Number of chunks" /> + </when> + <when value="base"> + <param name="count" type="integer" value="10" label="Number of chunks" /> + </when> + <when value="size"> + <param name="count" type="integer" value="100" label="Size of chunks (bp)" /> + </when> + <when value="byname" /> + </conditional> + </inputs> + <outputs> + <collection name="output_list" type="list" label="${tool.name} on ${on_string}"> + <discover_datasets pattern="(?P<designation>.*)\.fa" ext="fasta" directory="out"/> + </collection> + </outputs> + + <tests> + <test> + <param name="input" ftype="fasta" value="CDS.fa" /> + <param name="split_type" value="sequence" /> + <param name="count" value="5" /> + <output_collection name="output_list" type="list"> + <element name="0" file="0.fa" /> + <element name="1" file="1.fa" /> + <element name="2" file="2.fa" /> + <element name="3" file="3.fa" /> + <element name="4" file="4.fa" /> + </output_collection> + </test> + <test> + <param name="input" ftype="fasta" value="CDS.fa"/> + <param name="split_type" value="byname"/> + <output_collection name="output_list" type="list"> + <element name="ENSCAFT00000022939_canisfamiliaris" file="ENSCAFT00000022939_canisfamiliaris.fa" /> + <element name="ENSMUST00000207100_musmusculus" file="ENSMUST00000207100_musmusculus.fa" /> + <element name="ENSSSCT00000014817_susscrofa" file="ENSSSCT00000014817_susscrofa.fa" /> + <element name="ENSCAFT00000022963_canisfamiliaris" file="ENSCAFT00000022963_canisfamiliaris.fa" /> + <element name="ENSMUST00000208839_musmusculus" file="ENSMUST00000208839_musmusculus.fa" /> + <element name="ENSSSCT00000023183_susscrofa" file="ENSSSCT00000023183_susscrofa.fa" /> + <element name="ENSCAFT00000025950_canisfamiliaris" file="ENSCAFT00000025950_canisfamiliaris.fa" /> + <element name="ENSPTRT00000019089_pantroglodytes" file="ENSPTRT00000019089_pantroglodytes.fa" /> + <element name="ENSSSCT00000032764_susscrofa" file="ENSSSCT00000032764_susscrofa.fa" /> + <element name="ENSMUST00000026013_musmusculus" file="ENSMUST00000026013_musmusculus.fa" /> + <element name="ENSPTRT00000034846_pantroglodytes" file="ENSPTRT00000034846_pantroglodytes.fa" /> + <element name="ENSSSCT00000033745_susscrofa" file="ENSSSCT00000033745_susscrofa.fa" /> + <element name="ENSMUST00000040820_musmusculus" file="ENSMUST00000040820_musmusculus.fa" /> + <element name="ENSPTRT00000040520_pantroglodytes" file="ENSPTRT00000040520_pantroglodytes.fa" /> + <element name="ENSSSCT00000035258_susscrofa" file="ENSSSCT00000035258_susscrofa.fa" /> + <element name="ENSMUST00000041588_musmusculus" file="ENSMUST00000041588_musmusculus.fa" /> + <element name="ENSPTRT00000040521_pantroglodytes" file="ENSPTRT00000040521_pantroglodytes.fa" /> + <element name="ENST00000302850_homosapiens" file="ENST00000302850_homosapiens.fa" /> + <element name="ENSMUST00000091291_musmusculus" file="ENSMUST00000091291_musmusculus.fa" /> + <element name="ENSRNOT00000041155_rattusnorvegicus" file="ENSRNOT00000041155_rattusnorvegicus.fa" /> + <element name="ENST00000338702_homosapiens" file="ENST00000338702_homosapiens.fa" /> + <element name="ENSMUST00000100505_musmusculus" file="ENSMUST00000100505_musmusculus.fa" /> + <element name="ENSRNOT00000044009_rattusnorvegicus" file="ENSRNOT00000044009_rattusnorvegicus.fa" /> + <element name="ENST00000340611_homosapiens" file="ENST00000340611_homosapiens.fa" /> + <element name="ENSMUST00000110806_musmusculus" file="ENSMUST00000110806_musmusculus.fa" /> + <element name="ENSRNOT00000064726_rattusnorvegicus" file="ENSRNOT00000064726_rattusnorvegicus.fa" /> + <element name="ENST00000341500_homosapiens" file="ENST00000341500_homosapiens.fa" /> + <element name="ENSMUST00000153440_musmusculus" file="ENSMUST00000153440_musmusculus.fa" /> + <element name="ENSRNOT00000066674_rattusnorvegicus" file="ENSRNOT00000066674_rattusnorvegicus.fa" /> + <element name="ENST00000378069_homosapiens" file="ENST00000378069_homosapiens.fa" /> + <element name="ENSMUST00000163344_musmusculus" file="ENSMUST00000163344_musmusculus.fa" /> + <element name="ENSRNOT00000067448_rattusnorvegicus" file="ENSRNOT00000067448_rattusnorvegicus.fa" /> + <element name="ENST00000421712_homosapiens" file="ENST00000421712_homosapiens.fa" /> + <element name="ENSMUST00000168613_musmusculus" file="ENSMUST00000168613_musmusculus.fa" /> + <element name="ENSSSCT00000008295_susscrofa" file="ENSSSCT00000008295_susscrofa.fa" /> + <element name="ENST00000542639_homosapiens" file="ENST00000542639_homosapiens.fa" /> + <element name="ENSMUST00000173143_musmusculus" file="ENSMUST00000173143_musmusculus.fa" /> + <element name="ENSSSCT00000013404_susscrofa" file="ENSSSCT00000013404_susscrofa.fa" /> + <element name="ENST00000600492_homosapiens" file="ENST00000600492_homosapiens.fa" /> + </output_collection> + </test> + </tests> + <help><![CDATA[ +**What it does** + +`faSplit`_ is a tool to split a single FASTA file into several files. + +.. _faSplit: http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/FOOTER.txt + ]]></help> + <citations> + </citations> +</tool> |
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| diff -r 000000000000 -r dc36d50254d8 test-data/0.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/0.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| b'@@ -0,0 +1,309 @@\n+>ENST00000338702_homosapiens\n+ATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGT\n+CGTGATCGGAGGTGGCATTTCAGGACTATCTGCTGCCAAACTCTTGACTG\n+AATATGGCGTTAGTGTTTTGGTTTTAGAAGCTCGGGACAGGGTTGGAGGA\n+AGAACATATACTATAAGGAATGAGCATGTTGATTACGTAGATGTTGGTGG\n+AGCTTATGTGGGACCAACCCAAAACAGAATCTTACGCTTGTCTAAGGAGC\n+TGGGCATAGAGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTCAATAT\n+GTCAAGGGGAAAACATATCCATTTCGGGGCGCCTTTCCACCAGTATGGAA\n+TCCCATTGCATATTTGGATTACAATAATCTGTGGAGGACAATAGATAACA\n+TGGGGAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGAC\n+AAATGGGACAAAATGACCATGAAAGAGCTCATTGACAAAATCTGCTGGAC\n+AAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATCAATGTGACCT\n+CTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCAG\n+TGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGTGGCCAGGAACG\n+GAAGTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTCC\n+TCGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTCA\n+AGTGACAACATCATCATAGAGACGCTGAACCATGAACATTATGAGTGCAA\n+ATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAGATTCACTTCA\n+GACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGGCTTCCAATG\n+GGAGCTGTCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGAA\n+GAAGGATTACTGTGGCTGCATGATCATTGAAGATGAAGATGCTCCAATTT\n+CAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCATG\n+GGCTTCATTCTTGCCCGGAAAGCTGATCGACTTGCTAAGCTACATAAGGA\n+AATAAGGAAGAAGAAAATCTGTGAGCTCTATGCCAAAGTGCTGGGATCCC\n+AAGAAGCTTTACATCCAGTGCATTATGAAGAGAAGAACTGGTGTGAGGAG\n+CAGTACTCTGGGGGCTGCTACACGGCCTACTTCCCTCCTGGGATCATGAC\n+TCAATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGG\n+GCACAGAGACTGCCACAAAGTGGAGCGGCTACATGGAAGGGGCAGTTGAG\n+GCTGGAGAACGAGCAGCTAGGGAGGTCTTAAATGGTCTCGGGAAGGTGAC\n+CGAGAAAGATATCTGGGTACAAGAACCTGAATCAAAGGACGTTCCAGCGG\n+TAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGGC\n+CTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTGT\n+GCTGTACAAATACAAGCTCCTGCCACGGTCTTGA\n+>ENST00000542639_homosapiens\n+ATGGGGAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGA\n+CAAATGGGACAAAATGACCATGAAAGAGCTCATTGACAAAATCTGCTGGA\n+CAAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATCAATGTGACC\n+TCTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCA\n+GTGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGTGGCCAGGAAC\n+GGAAGTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTC\n+CTCGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTC\n+AAGTGACAACATCATCATAGAGACGCTGAACCATGAACATTATGAGTGCA\n+AATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAGATTCACTTC\n+AGACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGGCTTCCAAT\n+GGGAGCTGTCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGA\n+AGAAGGATTACTGTGGCTGCATGATCATTGAAGATGAAGATGCTCCAATT\n+TCAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCAT\n+GGGCTTCATTCTTGCCCGGAAAGCTGATCGACTTGCTAAGCTACATAAGG\n+AAATAAGGAAGAAGAAAATCTGTGAGCTCTATGCCAAAGTGCTGGGATCC\n+CAAGAAGCTTTACATCCAGTGCATTATGAAGAGAAGAACTGGTGTGAGGA\n+GCAGTACTCTGGGGGCTGCTACACGGCCTACTTCCCTCCTGGGATCATGA\n+CTCAATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCG\n+GGCACAGAGACTGCCACAAAGTGGAGCGGCTACATGGAAGGGGCAGTTGA\n+GGCTGGAGAACGAGCAGCTAGGGAGGTCTTAAATGGTCTCGGGAAGGTGA\n+CCGAGAAAGATATCTGGGTACAAGAACCTGAATCAAAGGACGTTCCAGCG\n+GTAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGG\n+CCTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTG\n+TGCTGTACAAATACAAGCTCCTGCCACGGTCTTGA\n+>ENSPTRT00000040520_pantroglodytes\n+ATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGT\n+CGTGATCGGAGGTGGCATTTCAGGACTATCTGCTGCCAAACTCTTGACTG\n+AATATGGCGTTAGTGTTTTAGTTTTAGAAGCTCGGGACAGGGTTGGAGGA\n+AGAACATATACTATAAGGAATGAGCATGTTGATTACGTAGATGTTGGTGG\n+AGCTTATGTGGGACCAACCCAAAACAGAATCTTACGCTTGTCTAAGGAGC\n+TGGGCATAGAGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTCAATAT\n+GTCAAGGGGAAAACATATCCATTTCGGGGCGCCTTTCCACCAGTATGGAA\n+TCCCATTGCATATTTGGATTACAATAATCTGTGGCGGACAATAGATAACA\n+TGGGGAAGGAGATTCCAAATGATGCACCCTGGGAGGCTCAACATGCTGAC\n+GAATGGGACAAAATGACCATGAAAGAGCTCATTGACAAAATCTGCTGGAC\n+AAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATCAATGTGACCT\n+CTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCAG\n+TGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGCGGCCAGGAACG\n+GAAGTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTCC\n+TTGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCATGTTGACCAGTCA\n+AGTGACAACATCATCATAGAGACACTGAACCATGAACATTATGAGTGCAA\n+ATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAGATTCACTTCA\n+GACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGTCTTCCAATG\n+GGAGCTATCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGAA\n+GAAGGATTACTGTGG'..b'CAAGGAAGCCTTCTGGAAGAA\n+AAAGGACTATTGTGGCTGCATGATCATTGAAGATGAGGAGGCTCCAATCG\n+CCATCACTCTGGATGACACTAAACCAGATGGGTCACTGCCTGCCATCATG\n+GGCTTCATACTTGCCCGGAAAGCTGATCGACTTGCTAAACTACATAAAGA\n+CATAAGGAAGAGGAAAATCTGTGAGCTGTATGCCAAAGTTCTGGGATCTC\n+AAGAAGCATTATATCCAGTCCATTATGAAGAGAAGAACTGGTGTGAGGAG\n+CAGTACTCCGGGGGCTGCTACACAGCCTACTTCCCTCCTGGTATCATGAC\n+CCAGTATGGAAGGGTGATTCGCCAGCCAGTAGGTAGGATTTACTTTGCAG\n+GCACAGAGACAGCAACACAGTGGAGTGGCTACATGGAAGGAGCAGTTGAA\n+GCTGGAGAACGAGCAGCTAGAGAGGTGTTGAATGCTCTAGGAAAAGTCGC\n+GAAGAAGGATATATGGGTTGAAGAACCCGAGTCCAAGGATGTTCCAGCCA\n+TTGAAATTACCCACACCTTCTTAGAGAGGAACCTGCCTTCCGTGCCTGGT\n+CTGCTCAAGATCACTGGTGTTTCCACTTCTGTGGCTCTTCTCTGCTTTGT\n+ATTGTACAAGATTAAGAAGCTCCCATGCTGA\n+>ENSPTRT00000040521_pantroglodytes\n+ATGAGCAACAAATGCGACGTGGTCGTGGTGGGGGGCGGCATCTCAGGTAA\n+GGCAGCAGCCAAACTTCTGCATGACTCTGGACTGAATGTGGTTGTTCTGG\n+AAGCCCGGGACCGTGTGGGAGGCAGGACTTACACTCTTAGGAACCAAAAG\n+GTTAAATATGTGGACCTTGGAGGATCCTATGTTGGACCAACCCAGAATCG\n+TATCTTGAGATTAGCCAAGGAGCTAGGATTGGAGACCTACAAAGTGAATG\n+AGGTTGAGCGTCTGATCCACCATGTAAAGGGCAAATCATACCCCTTCAGG\n+GGGCCGTTCCCACCTGTATGGAATCCAATTACCTACTTAGATCATAACAA\n+CTTTTGGAGGACAATGGATGACATGGGGCGAGAGATTCCGAGTGATGCCC\n+CATGGAAGGCTCCCCTTGCAGAAGAGTGGGACAACATGACAATGAAGGAG\n+CTACTGGACAAGCTCTGCTGGACAGAATCTGCAAAGCAGCTTGCCACTCT\n+CTTTGTGAACCTGTGTGTCACTGCAGAGACCCATGAGGTCTCTGCTCTCT\n+GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGCACAACAAGAATCATCTCG\n+ACAACGAATGGAGGACAGGAGAGGAAATTTGTGGGCGGATCTGGTCAAGT\n+GAGCGAGCGGATAATGGACCTCCTTGGAGACCGAGTGAAGCTGGAGAGGC\n+CTGTGATCTACATTGACCAGACAAGAGAAAATGTCCTTGTGGAGACCCTA\n+AACCATGAGATGTATGAGGCTAAATATGTGATTAGTGCTATTCCTCCTAC\n+TCTGGGCATGAAGATTCACTTCAATCCCCCTCTGCCAATGATGAGAAACC\n+AGATGATCACTCGTGTGCCTTTGGGTTCAGTCATCAAGTGTATAGTTTAT\n+TATAAAGAGCCTTTCTGGAGGAAAAAGGATTACTGTGGAACCATGATTAT\n+TGATGGAGAGGAAGCTCCAGTTGCCTACACGTTAGATGATACCAAACCTG\n+AAGGCAACTATGCTGCCATAATGGGATTTATCCTGGCCCACAAAGCCAGA\n+AAACTGGCACGTCTTACCAAAGAGGAAAGGTTGAAGAAACTTTGTGAACT\n+CTATGCCAAGGTTCTGGGTTCCCCAGAAGCTCTGGAGCCAGTGCATTATG\n+AAGAAAAGAACTGGTGTGAGGAGCAGTACTCTGGGGGCTGCTACACAACT\n+TACTTCCCCCCTGGGATCCTGACTCAATATGGAAGGGTTCTACGCCAGCC\n+AGTGGACAGGATTTACTTTGCAGGCACCGAGACTGCCACACACTGGAGCG\n+GCTACATGGAGGGGGCTGTAGAGGCCGGGGAGAGAGCAGCCCGAGAGATC\n+CTGCATGCCATGGGGAAGATTCCAGAGGATGAAATCTGGCAGTCAGAACC\n+AGAGTCTGTGGATGTCCCTGCACAGCCCATCACCACGACCTTTTTGGAGA\n+GACATTTGCCCTCCGTGCCAGGCCTGCTCAGGCTGATTGGATTGACCACC\n+ATCTTTTCAGCAACGGCTCTTGGCTTCCTGGCCCACAAAAGGGGGCTACT\n+TGTGCGAGTCTAA\n+>ENST00000378069_homosapiens\n+ATGAGCAACAAATGCGACGTGGTCGTGGTGGGGGGCGGCATCTCAGGTAT\n+GGCAGCAGCCAAACTTCTGCATGACTCTGGACTGAATGTGGTTGTTCTGG\n+AAGCCCGGGACCGTGTGGGAGGCAGGACTTACACTCTTAGGAACCAAAAG\n+GTTAAATATGTGGACCTTGGAGGATCCTATGTTGGACCAACCCAGAATCG\n+TATCTTGAGATTAGCCAAGGAGCTAGGATTGGAGACCTACAAAGTGAATG\n+AGGTTGAGCGTCTGATCCACCATGTAAAGGGCAAATCATACCCCTTCAGG\n+GGGCCATTCCCACCTGTATGGAATCCAATTACCTACTTAGATCATAACAA\n+CTTTTGGAGGACAATGGATGACATGGGGCGAGAGATTCCGAGTGATGCCC\n+CATGGAAGGCTCCCCTTGCAGAAGAGTGGGACAACATGACAATGAAGGAG\n+CTACTGGACAAGCTCTGCTGGACTGAATCTGCAAAGCAGCTTGCCACTCT\n+CTTTGTGAACCTGTGTGTCACTGCAGAGACCCATGAGGTCTCTGCTCTCT\n+GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGCACAACAAGAATCATCTCG\n+ACAACAAATGGAGGACAGGAGAGGAAATTTGTGGGCGGATCTGGTCAAGT\n+GAGTGAGCGGATAATGGACCTCCTTGGAGACCGAGTGAAGCTGGAGAGGC\n+CTGTGATCTACATTGACCAGACAAGAGAAAATGTCCTTGTGGAGACCCTA\n+AACCATGAGATGTATGAGGCTAAATATGTGATTAGTGCTATTCCTCCTAC\n+TCTGGGCATGAAGATTCACTTCAATCCCCCTCTGCCAATGATGAGAAACC\n+AGATGATCACTCGTGTGCCTTTGGGTTCAGTCATCAAGTGTATAGTTTAT\n+TATAAAGAGCCTTTCTGGAGGAAAAAGGATTACTGTGGAACCATGATTAT\n+TGATGGAGAAGAAGCTCCAGTTGCCTACACGTTGGATGATACCAAACCTG\n+AAGGCAACTATGCTGCCATAATGGGATTTATCCTGGCCCACAAAGCCAGA\n+AAACTGGCACGTCTTACCAAAGAGGAAAGGTTGAAGAAACTTTGTGAACT\n+CTATGCCAAGGTTCTGGGTTCCCTAGAAGCTCTGGAGCCAGTGCATTATG\n+AAGAAAAGAACTGGTGTGAGGAGCAGTACTCTGGGGGCTGCTACACAACT\n+TATTTCCCCCCTGGGATCCTGACTCAATATGGAAGGGTTCTACGCCAGCC\n+AGTGGACAGGATTTACTTTGCAGGCACCGAGACTGCCACACACTGGAGCG\n+GCTACATGGAGGGGGCTGTAGAGGCCGGGGAGAGAGCAGCCCGAGAGATC\n+CTGCATGCCATGGGGAAGATTCCAGAGGATGAAATCTGGCAGTCAGAACC\n+AGAGTCTGTGGATGTCCCTGCACAGCCCATCACCACCACCTTTTTGGAGA\n+GACATTTGCCCTCCGTGCCAGGCCTGCTCAGGCTGATTGGATTGACCACC\n+ATCTTTTCAGCAACGGCTCTTGGCTTCCTGGCCCACAAAAGGGGGCTACT\n+TGTGAGAGTCTAA\n' |
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| diff -r 000000000000 -r dc36d50254d8 test-data/1.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/1.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| b'@@ -0,0 +1,303 @@\n+>ENSRNOT00000044009_rattusnorvegicus\n+ATGAGCAACAAATGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTAT\n+GGCAGCAGCCAAACTTTTGCATGACTGTGGCCTCAGTGTGGTGGTTCTGG\n+AAGCACGAGACCGTGTGGGAGGCAGGACTTACACAATTAGGAATAAAAAT\n+GTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCGACCCAGAATCG\n+TATCTTACGATTGGCCAAAGAGCTAGGATTGGAGACCTATAAAGTGAATG\n+AAGTTGAGCGGCTGATCCACTTTGTAAAGGGAAAATCATATGCCTTCAGG\n+GGCCCATTCCCACCAGTGTGGAATCCAATCACTTACCTAGATTATAACAA\n+CCTCTGGAGAACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTC\n+CATGGAAGGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAAGAG\n+TTGCTAGATAAGATCTGCTGGACCAACTCTACAAAGCAGATTGCCACACT\n+CTTTGTGAACCTATGTGTAACTGCGGAGACCCATGAGGTTTCTGCACTGT\n+GGTTCCTGTGGTATGTGAAGCAGTGTGGGGGTACAACCAGAATCATATCA\n+ACAACCAATGGAGGACAGGAGAGGAAATTTATTGGTGGATCTGGTCAAGT\n+GAGTGAGCGGATAAAGGATATCCTTGGGGACAGAGTGAAGCTGGAGAGGC\n+CGGTGATCCACATTGACCAGACAGGAGAAAATGTTGTTGTGAAAACCCTA\n+AACCATGAAATATATGAGGCTAAATATGTGATTAGTGCCATCCCACCTGT\n+TTTGGGCATGAAGATTCACCATAGTCCTCCTCTGCCCATTCTAAGAAACC\n+AGCTGATTACTCGTGTGCCTTTGGGTTCAGTTATTAAGTGCATGGTTTAT\n+TATAAAGAACCCTTCTGGAGGAAAAAGGATTTCTGTGGAACCATGGTTAT\n+TGAAGGAGAGGAAGCTCCAATTGCGTACACATTGGATGATACCAAGCCAG\n+ATGGCAGCTGTGCTGCTATAATGGGATTTATCCTTGCTCACAAAGCTAGA\n+AAACTGGTACGCCTTACTAAAGAAGAAAGACTGAGGAAGCTCTGTGAGCT\n+ATACGCGAAAGTTCTGAACTCTCAAGAAGCTCTGCAGCCAGTCCATTATG\n+AAGAGAAGAACTGGTGTGAGGAGCAGTACTCCGGGGGCTGCTACACAGCC\n+TACTTCCCTCCTGGCATCTTGACCCAGTATGGAAGGGTTCTACGCCAGCC\n+AGTGGGCAAGATTTTCTTTGCAGGCACCGAGACAGCTTCACATTGGAGTG\n+GCTACATGGAGGGGGCTGTAGAGGCTGGAGAGAGAGCTGCCAGAGAGATT\n+CTTCATGCCATTGGGAAGATTCCAGAGGATGAAATTTGGCAGCCAGAACC\n+AGAATCTGTGGATGTCCCAGCAAGACCCATTACCAACACCTTCCTGGAGA\n+GACACTTGCCTTCTGTACCAGGTCTACTAAAGCTGCTTGGATTGACCACC\n+ATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAAGGGTCTGTT\n+TGTACGTTTCTAA\n+>ENSMUST00000040820_musmusculus\n+ATGAGCAACAAAAGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTAT\n+GGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGG\n+AAGCACGGGACCGTGTAGGAGGCAGGACTTACACAATTAGGAATAAAAAC\n+GTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACCCAGAATCG\n+TATCTTACGATTGGCCAAAGAGCTAGGATTGGAGACCTATAAAGTTAATG\n+AAGTTGAGCGGCTGATACACTTTGTAAAGGGAAAATCATATGCCTTCAGG\n+GGCCCATTTCCACCAGTATGGAATCCTATCACCTACCTAGATAATAACAA\n+CCTCTGGAGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTC\n+CATGGAAAGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAAGAA\n+TTGCTAGATAAGATCTGCTGGACCAAATCTACAAAGCAGATTGCCACGCT\n+CTTTGTGAACCTGTGTGTAACTGCAGAGACCCATGAGGTCTCTGCACTAT\n+GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGTACAACCAGAATCATCTCA\n+ACAACCAATGGAGGACAGGAGAGGAAATTTATTGGTGGATCTGGTCAAGT\n+GAGTGAACGGATAAAGGATATACTTGGGGACCGAGTGAAGCTGGAGAGGC\n+CTGTGATCCACATTGACCAGACAGGGGAAAATGTTATTGTGAAAACCCTA\n+AACCATGAAATATATGAGGCTAAATATGTGATTAGTGCCATTCCACCTGC\n+TTTGGGCATGAAGATTCACTATAGTCCTCCTCTGCCCATGCTAAGAAACC\n+AGCTGATCTCTCGTGTGCCTTTGGGTTCAGTTATTAAATGCATGGTTTAT\n+TACAAAGAGCCCTTCTGGAGGAAAAAGGATTTCTGTGGAACCATGGTTAT\n+CGAAGGAGAGGAAGCTCCAATTGCATACACATTGGATGATACCAAACCAG\n+ATGGCACCTATGCTGCTATAATGGGATTTATCCTTGCTCACAAAGCTAGA\n+AAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAGCT\n+ATATGCAAAAGTGCTGAACTCCCAAGAAGCTCTGCAGCCCGTCCATTATG\n+AAGAGAAGAACTGGTGTGAGGAACAGTATTCTGGGGGCTGCTACACAACC\n+TACTTCCCTCCCGGCATCTTGACCCAGTATGGAAGGGTTCTACGTCAGCC\n+AGTGGGCAAGATTTTCTTTGCAGGCACTGAAACAGCCTCACACTGGAGCG\n+GCTACATGGAGGGGGCTGTGGAGGCTGGGGAGAGAGCAGCCAGAGAGATT\n+CTTCATGCCATTGGGAAGATTCCAGAAGATGAAATTTGGCAGCCAGAACC\n+AGAATCTTTGGATGTCCCTGCACGACCCATTACCAGTACCTTCCTGGAGA\n+GACACCTGCCTTCTGTACCAGGCCTGCTAAAGCTGTTTGGATTGACCACC\n+ATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAGGGGCCTGTT\n+TGTACATTTTTAA\n+>ENSMUST00000168613_musmusculus\n+ATGAGCAACAAAAGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTAT\n+GGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGG\n+AAGCACGGGACCGTGTAGGAGGCAGGACTTACACAATTAGGAATAAAAAC\n+GTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACCCAGAATCG\n+TATCTTACGATTGGCCAAAGAGCTAGGATTGGAGACCTATAAAGTTAATG\n+AAGTTGAGCGGCTGATACACTTTGTAAAGGGAAAATCATATGCCTTCAGG\n+GGCCCATTTCCACCAGTATGGAATCCTATCACCTACCTAGATAATAACAA\n+CCTCTGGAGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTC\n+CATGGAAAGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAAGAA\n+TTGCTAGATAAGATCTGCTGGACCAAATCTACAAAGCAGATTGCCACGCT\n+CTTTGTGAACCTGTGTGTAACTGCAGAGACCCATGAGGTCTCTGCACTAT\n+GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGTACAACCAGAATCATCTCA'..b'GCTCCTCCAGGACCCTGAGAGTTATGTCCGAGCGAGCGCGGTGAC\n+CGCCATGGGGCAGCTGTCCAGCCAGGGCCTGCACGCCCCCACCAGCCCTG\n+AGCATGCAGAGGCCCGGCAGAGCCTGTTCCCGGAGCTCCTGCACATCCTC\n+TCCGTAGACTCGGAGGGCTTCCCACGGCGGGCGGTCATGCAAGTCTTCAC\n+TGAGTGGCTGCGGGACGGCCACGCCGACGCGGCCCGGGACACGGAGCAGT\n+TCGTGGCCACTGTGCTGCAGGTGGCGAGCCGGGACCTGGACTGGGAGGTC\n+CGCGCCCAGGGCCTGGAGCTGGCCCTCGTGTTCCTGGGCCAGACTTTGGG\n+GCCGCCGCGTACCCACTGCCCCTATGCCGTGGCCCTACCCGAGGTGGCCC\n+CAGCCCAGCCACTCACCGAGGCACTGAGGGCTCTCTGCCACGTGGGGCTC\n+TTTGACTTCGCCTTTTGTGCCTTGTTTGACTGCGACCGCCCTGTGGCGCA\n+GAAGTCTTGTGACCTCCTTCTCTTCCTGAGGGACAAGATTGCTTCCTACA\n+GCAGCCTGCGGGAGGCCAGGGGCGGCCCCAACACTGCCTCCGCAGAGGCC\n+ACCCTGCCGAGGTGGCGGGCGGGTGAGCAGGCCCAGCCCCCAGGGGACCA\n+GGAGCCTGAGGCTGTGCTGGCCATGCTCAGGTCCCTAGACCTGGAGGGCC\n+TGCGGAGCACACTGGCCGAGAGCAGCGACCACGTGGAGAAGAGTCCCCAG\n+TCCCTCCTGCAGGACATGCTGGCCACGGGAGGCTTCCTGCAGGGGGATGA\n+GGCCGACTGCTACTGA\n+>ENST00000340611_homosapiens\n+ATGGACCCAGAATGCGCCCAGCTGCTCCCGGCTCTCTGTGCTGTTCTGGT\n+AGATCCCAGGCAGCCGGTGGCAGATGACACCTGTTTGGAGAAGCTCCTGG\n+ACTGGTTTAAAACGGTCACTGAAGGAGAGTCCAGTGTCGTGCTGCTGCAG\n+GAGCACCCCTGCCTGGTGGAGCTGCTGTCCCATGTGCTGAAAGTCCAGGA\n+CCTGAGTTCTGGGGTCCTCTCCTTCTCACTGCGCCTGGCAGGAACCTTCG\n+CAGCCCAGGAAAACTGCTTCCAGTATCTTCAGCAGGGGGAGTTACTACCA\n+GGGCTCTTTGGGGAGCCAGGACCCCTCGGCCGAGCAACCTGGGCCGTCCC\n+CACCGTGCGCAGCGGCTGGATCCAGGGCCTGCGCTCCCTGGCACAGCACC\n+CCAGCGCCCTGCGCTTCCTGGCCGACCATGGTGCGGTCGACACCATCTTC\n+TCCCTGCAGGGAGACTCCAGCCTGTTTGTGGCCTCGGCGGCCAGTCAGCT\n+CCTGGTGCACGTCCTGGCTTTGTCCATGCGAGGTGGAGCCGAGGGGCAGC\n+CCTGCCTGCCGGGGGGTGACTGGCCCGCGTGTGCCCAGAAGATCATGGAT\n+CACGTTGAAGAGTCCTTGTGCTCCGCGGCCACCCCCAAGGTCACTCAGGC\n+CCTGAACGTCCTGACCACGACCTTCGGGCGCTGCCAGAGCCCCTGGACGG\n+AAGCCCTGTGGGTGCGGCTGAGTCCCCGCGTGGCCTGTCTGCTGGAGAGA\n+GACCCCATCCCCGCCGCACACTCGTTCGTGGACCTGCTTCTCTGTGTGGC\n+TCGTTCTCCCGTGTTCAGTTCTTCCGACGGCAGCCTGTGGGAGACAGTGG\n+CGCGGGCTCTGAGCTGCCTGGGTCCCACCCACATGGGACCCCTGGCTTTG\n+GGGATCCTGAAGCTCGAGCACTGTCCACAGGCACTGAGGACCCAGGCCTT\n+CCAGGTCCTTCTCCAGCCCCTGGCCTGTGTCCTGAAGGCCACGGTTCAGG\n+CCCCCGGACCCCCAGGCTTGCTGGACGGGACGGCAGACGATGCCACGACG\n+GTGGACACACTCCTGGCCTCCAAGTCGTCCTGCGCCGGCCTCCTGTGCCG\n+CACCCTGGCTCACCTGGAGGAGCTGCAGCCGCTGCCCCAGCGCCCTTCAC\n+CGTGGCCCCAGGCGTCTCTACTGGGGGCTACAGTGACTGTCCTGCGGCTC\n+TGTGACGGCTCGGCTGCCCCTGCCTCCAGTGTGGGGGGCCACCTCTGTGG\n+GACCCTGGCGGGCTGCGTCCGGGTCCAGCGAGCAGCCCTCGACTTCCTGG\n+GGACGCTGTCACAGGGGACAGGCCCCCAGGAGCTGGTGACGCAGGCGCTT\n+GCTGTCCTCCTGGAGTGCCTCGAGAGCCCCGGCTCCAGCCCCACGGTTCT\n+GAAGAAGGCCTTCCAGGCCACGCTCAGGTGGCTCCTGAGCTCACCCAAGA\n+CCCCCGGCTGCTCTGATCTCGGCCCCCTCATCCCGCAGTTCCTCAGAGAG\n+CTGTTCCCTGTGCTGCAGAAACGCCTGTGCCACCCCTGCTGGGAGGTGAG\n+GGACTCCGCCCTCGAGTTCCTGACCCAGCTGAGCAGGCACTGGGGAGGAC\n+AGGCTGACTTCAGATGCGCACTCTTGGCTTCAGAGGTGCCTCAGCTGGCC\n+CTGCAGCTCCTCCAGGACCCTGAGAGTTATGTCCGAGCGAGTGCAGTGAC\n+CGCCATGGGGCAGCTGTCCAGCCAGGGCCTGCACGCCCCCACCAGCCCTG\n+AGCATGCAGAGGCCCGGCAGAGCCTGTTCCTGGAGCTCCTGCACATCCTC\n+TCCGTAGACTCGGAGGGCTTCCCACGGCGGGCGGTCATGCAAGTCTTCAC\n+TGAGTGGCTGCGGGACGGCCACGCCGACGCGGCCCAGGACACGGAGCAGT\n+TCGTGGCCACTGTGCTGCAGGCGGCGAGCCGAGACCTGGACTGGGAGGTC\n+CGCGCCCAGGGCCTGGAGCTGGCCCTCGTGTTCCTGGGCCAGACTTTGGG\n+GCCGCCGCGTACCCACTGCCCCTATGCCGTGGCCCTACCCGAGGTGGCCC\n+CAGCCCAGCCACTCACCGAGGCACTGAGGGCTCTCTGCCACGTGGGGCTC\n+TTTGACTTCGCCTTTTGTGCCTTGTTTGACTGCGACCGCCCTGTGGCGCA\n+GAAGTCTTGTGACCTCCTTCTCTTCCTGAGGGACAAGATTGCTTCCTACA\n+GCAGCCTGCGGGAGGCCAGGGGCAGCCCCAACACTGCCTCCGCAGAGGCC\n+ACCCTGCCGAGGTGGCGGGCGGGTGAGCAGGCCCAGCCCCCAGGGGACCA\n+GGAGCCTGAGGCTGTGCTGGCCATGCTCAGGTCCCTAGACCTGGAGGGCC\n+TGCGGAGCACGCTGGCCGAGAGCAGCGACCACGTGGAAAAGAGTCCCCAG\n+TCCCTCCTGCAGGACATGCTGGCCACGGGAGGCTTCCTGCAGGGGGACGA\n+GGCCGACTGCTACTGA\n+>ENST00000421712_homosapiens\n+ATGGACCCAGAATGCGCCCAGCTGCTCCCGGCTCTCTGTGCTGTTCTGGT\n+AGATCCCAGGCAGCCGGTGGCAGATGACACCTGTTTGGAGAAGCTCCTGG\n+ACTGGTTTAAAACGGTCACTGAAGGAGAGTCCAGTGTCGTGCTGCTGCAG\n+GAGCACCCCTGCCTGGTGGAGCTGCTGTCCCATGTGCTGAAAGTCCAGGA\n+CCTGAGTTCTGGGGTCCTCTCCTTCTCACTGCGCCTGGCAGGAACCTTCG\n+CAGCCCAGGAAAACTGCTTCCAGTATCTTCAGGTGCGGTCGACACCATCT\n+TCTCCCTGCAGGGAGACTCCAGCCTGTTTGTGGCCTCGGCGGCCAGTCAG\n+CTCCTGGTGCACGTCCTGGCTTTGTCCATGCGAGGTGGAGCCGAGGGGCA\n+GCCCTGCCTGCCGGGGGGTGACTGGCCCGCGTGTGCCCAGAAGATCATGG\n+ATCACGTTGAAGAGTCCTTGTGCTCCGCGGCCACCCCCAAGGTCACTCAG\n+GCCCTGA\n' |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/2.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/2.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| b'@@ -0,0 +1,314 @@\n+>ENSRNOT00000064726_rattusnorvegicus\n+ATGGACGCAGAATGCTCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGC\n+AGATCCTAGACAGCTGGTGGCAGATGACACCTGCTTGGAGAAACTACTGG\n+ACTGGTTTAAAACAGTGACAGAGGCAGAGCCCAGCCTCCAACTACTGCAG\n+GACCACCCCTGCCTAATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGA\n+TGTGAGCCCTAGGGTCCTCTCCTTTGCTCTGCGCCTCGTTGGGGTCTTTG\n+CGGCCCAGGAGGACTGTTTCCAGTACCTTCAGCAGGGGGAGTTGTTGCTG\n+GGGCTCTTTGGGGAGACAGGTGCCCTTAGCTGGGCAGCCTGGAGCATCCC\n+CAGTGTGCGCAGCGGCTGGATCCAGGGCCTGTGCTCCCTGGCACACCACC\n+CCAGTGCCCTGCACTTCCTGGCTGACAGTGGTGCTGTGGACACGATCTTC\n+TCCTTGCAAGGAGACCCCAGCCTGTTTGTAGCCTCAGCAGCCAGCCAGCT\n+CCTAGTACACATCCTGGCTCTGTCAATGCAAGGCGGAGCTCCAGGGTCCC\n+CCGTCCCTGAAGCCGTTGCCTGGCCTGTCTGTGCCCAGAAGATCATGAAC\n+CATGTAGAAGAGTCCTTGCATTCCAAAGCCACCCCACAGGTCACACAGGC\n+CTTGAATGTCCTGACGACGACCTTCGGGCGCTGCCACAACCCCTGGACAG\n+GGGTCCTCTGGGAGCGGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGA\n+GACCCCATTCCTGCCACACACTCGCTCATGGACCTGCTTCTCAGTGTGGC\n+CAGGTCTCCTGTGTTGAACTTTGCAGCCTGTGGCCTGTGGGAGATGCTGG\n+CCCAGACTCTGAGCCGCCTGAGCCCCACCCAAGCTGGGCCTCTAGCTCTG\n+GGGACCCTGAAACTTCAGCATTGTCCCCAGGAACTGAGGACCCAGGCCTT\n+TAGAGTCCTCCTTCAGCCACTGGCCTGCATCCTGAAAGCTACCACTCAGG\n+CCCCTGGACCTCCAGGCTTGCTGGACGGGACTGCGGGTAGCTTGCTGACT\n+GTGGATGCACTCTTATCTTCAAAGTCGGCCTGTGTGGGGCTCCTCTGCCA\n+GACTCTGGCGCACCTGGAGGAGCTGCAGATGCTGCCCCAGTGCCCCTCAC\n+CGTGGCCACAGGTGCCTCTGCTGCAAGCTGCTGTGACGATATTGCGTCTC\n+TCTGACGGCTCGGCGGACCCCAGTTCCAGTGCAGGAGGCCGTCTCTGTGG\n+GGCGCTGGGTGGCTGTGTTCGTGTCCAGCGAGCAGCCCTTGACTTCTTGG\n+GGACGCTGTCTCTGGGGACAAGCCCCCTGGAATTGGTGCTGGAGGTATTT\n+GCTGTCCTCCTGAAGACCCTGGAGAGCCCAGAGTCCAGCCCCATGGTCCT\n+AAAGAAGGCCTTCCAGGCCACACTCAGATGGCTCCAGAGCCCACACAAGA\n+CCCCCAGCGGCTCTGATCTCAGCCCCGATGCCTTGCTGTTCCTCGGAGAG\n+CTATTCCCCATACTACAGAAGCGCCTGTGCAGCCCGTGTTGGGAGGTGAG\n+GGACTCAGCCCTGGAGTTCCTGACGCATCTGATCCGGGACTGGGGAGGGC\n+AGGCTGACTTCAGAGAGGCACTGCATTCTTCAGAAGTACCCACACTTGCC\n+CGCCAGCTCCTCCAAGACCCTGAGAGTTATGTCCGAGCAAGTGCAGTGGG\n+TGCCGCTGGGCAGCTCTCCAGCCAGGGCCTTCAGGCCACTCCCGCCAACC\n+AGCAGGGCCTACTCATGGACCTCATGCATATCCTGTCCACGGACTCAGAG\n+GGCTTCCCTCGAAGAGCTGTGTTACGGGTCTTTACTGAATGGCTGAGGGA\n+TGGCCATGCTGATGTGGTTCGAGACACAGAGTGGTTCGTGGCCACTGTTC\n+TCCAGGCAGTGAGCCGGGATCTGGACTGGGAGGTCCGAGTGCAGGGCTTG\n+GAGCTGGCACAGGTATTCCTCATCCAGGCAATGGGGCAGCCTAGACTCCA\n+CTGTCCCTATACAGTAGGCCTGCCTGGGGCCACCTCTTCCCGCCCACACC\n+TGGAATTCTTGCAGACTCTCTGCCGTCTGCCACTCTTTGAGTTTGCCTTT\n+TGTGCCTTGCTTGACTGTGACCGCCCGGTGGCCCAAAAAGCCTGTGACCT\n+GCTCCTCTTCTTGAGGGACAAGACAGTTTCCTGCAGTAACCCTCAGGAGG\n+CCGGGGACAGCCCCAACTCAGCCTCAGTGGAGGCTGCCCTGCAGAGGTGG\n+CGGGAAGGTGAGCAGGCTCAGCCCCTAGGGGACCTGGAGCCTGAAGCCAT\n+GCTGGCCATCCTCAGGTCCTTAGACCTGGAGGGCCTGCAGGGCAGGCTGG\n+CCAAGAGCAGTGACCATGTGGAGAAGAGCCCACAGTCCCTGCTGCAGGAC\n+ATGCTGGCCACGGTGGGCGTGTTGGAGGAGAATGAAGCTGACTGCTACTA\n+A\n+>ENSMUST00000041588_musmusculus\n+ATGGACCCAGAATGCTCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGC\n+AGATCCCAGACAGCTGGTGGCAGATGACACCTGCTTGGAGAAACTGCTGG\n+ACTGGTTTAAAACAGTGACAGAGGCAGAGTCTAGCCTCCAACTACTACAG\n+GACCATCCCTGCTTAATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGA\n+CGTGAGCCCTAGGGTCCTCTCCTTTGCTCTGCGCCTTGTTGGGGTCTTCG\n+CAGCCCAGGAAGACTGTTTTGAGTACCTTCAGCAGGGAGAGTTGTTGCTG\n+GGGCTCTTTGGGGAGTCAGGTGCCCCCGGCTGGGCAGCCTGGAGCATCCC\n+AAGTGTGCGCAGCGGCTGGATCCAGGGTCTGTGCTACCTGGCACACCACC\n+CTAGCGCCCTGCACTTCCTGGCTGACAGTGGTGCTGTGGACACGCTCTTC\n+TCCTTGCAGGGAGACCCCAGCCTGTTCGTCGCCTCAGCAGCCAGCCAGCT\n+CCTAGTACATATCCTGGCTCTGTCCATGCAAGGTGGAGCCCCAGGGTCCC\n+CCGTCCCTGAAGCTGCTGCTTGGCCTATGTGTGCCCAGAAGATTGTGAAC\n+CATGTGGATGAGTCCCTGCATGCCAAAGCCACCCCCCAGGTCACACAGGC\n+CTTGAATGTCCTGACTACGACCTTCGGGCGCTGCCATAACCCCTGGACAG\n+GGGTCCTCTGGGAGCGGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGA\n+GACCCCATTCCAGCCGTGCACGCGCTCATGGACCTTCTTCTTAGTGTGGC\n+CAGGTCGCCTGTGTTGAATTTTGCAGCCTGTGGCCTGTGGGAGATGCTGG\n+CCCAGACTCTGAGCCGCCTGAGCCCCATACAAGCTGGGCCTCTAGCCCTG\n+GGGACCCTGAAACTTCAGCACTGTCCCCAGGAATTGAGGACCCAGGCCTT\n+TGGAGTCCTCCTACAGCCACTGGCCTGTATCCTGAAAGCTACCACTCAGG\n+CCCCTGGACCTCCAGGCTTGCTGGATGGGACTGTGGGTAGCTTGCTGACT\n+GTGGATATACTCTTGGCTTCAAAGTCAGCCTGTGTGGGACTCCTTTGCCA\n+GACTCTGGCTCACCTGGAGGAGCTGCAGATGCTGCCCCAGTGCCCCTCAC\n+CCTGGCCACAGGTGCATCTGCTGCAAGCTGCTTTGACTATATTGCATCTC\n+TGTGATGGCTCAGCGGACCCCAGCTCCAGTGCAGGAGGCCGTCTCTGTGG\n+GACTCTGGGTGGCTGTGTTCGTGTCCAGCGAGCAGCCCTTGACTTCTTGG\n+GGACCC'..b'CCCACCTGGAGCTGCTGCAGCCGCTACCCCAGCGCCCCTGCC\n+CCTGGCCTCAGGAGCCCCTGCTTGGGGCCGCGGTGACCCTGCTGCAGTTA\n+TGCAGGGGCTCAGCAAGCCCTGCCTCTGACGTGGGGCGCCACCTCTGCGC\n+GCTCCTGCTGGGCTGCGTGCGGGTGCAGCGAGCGGCCCTGGATTTCCTGG\n+GGACGCTGTCTCAGGGGACAGGCCCCCAAGAGCTGGTGACGGAGGTGTTT\n+GCTGTCCTTCTGGAATATCTCAGGAGCCCAGACTCCAGCCCCACGGTTCT\n+GAAGAAAGCCTTCCAGGCCACATTCAGGTGGCTCCTGAGCTCACCCAAGA\n+CCCCCGGCTGCTGTGATCTAGAACCCCATGCCCTGCTGGTCCTGAGAGAG\n+CTGCTTCCTGTGCTGCAGAAGCGTCTGTGCAGCCCCTGCTGGGAGGTGAG\n+GGACTCCGGCCTCGAGTTCCTGACTCAGATGACCAGACACTGGGGAGGGC\n+AGGCTGGCTTCAGACATGCACTCCTCGCTTCGGAGGTGCCCAAGCTTACC\n+GAGCAGCTCCTACGAGACCCTGAGAGTTACGTCCGTGCCAGTGCAGTGAC\n+CGTCATGGGGCAGCTCTCCAGCCAGGGGCTGCATGTCACCCCTGTGAGCC\n+CTGAGCATCCAGGGGGCCAGCAGAAGAGTCTGCTCGTGGAGCTTCTGCAT\n+ATCCTCTCCACAGATTCAGAGGGATTCCCGCGGAGAGCCGTCATGCAGGT\n+CTTCACCCAGTGGCTGAGGGACCACCATGCCGACGTGGCGGGGGACACGG\n+AACAGTTTATGGCCAGGGTGCTCCAGGTCGCCAGCCAGGATCTGGACTGG\n+GAGGTCCGGGCCCAGGGCCTGGAGCTGGCGCTGGTATTCCTGGAGCAGAC\n+GCTGGGCCAGTTCCACTCCCACTGTCCCTATGCTGTGACCCCACCCGTGG\n+CGGCCCCAGCTGGCTCGCTGGCCCAGGCCCTGCAGCCACTATGCCGAGTG\n+CGGCTCTTTGAGTTTGCCTTCCGTGCCTTGTTTGACTGTGACCGACCTGT\n+GGCTCAGAAGTCCTGTGATCTCCTCCTCTTCCTGAGGGCCAAGACTGCTT\n+CTTCCTCTGGTAGCCTGGAGGAGTCCAGGAGCGGCCCAGATGTGGCCTCT\n+GTGGAGGCTGCCTTGCAGAGGTGGCAGGCAGGTGATCAGGGCCAGCCCCT\n+GGGGGACCTGGAGCCCGAGGTCGTGCTGGCTGTGCTGAGGTCTGTGGACC\n+TGGAAGGCCTTCGGGGTGCATTAGCCGAGGGCAGTGACCACATGGAGAAG\n+AGCCCTCAGTCACTCCTGCAGGACATGCTGGCCACGGTGGGCGTCCTGGG\n+AGAGAACGAGGCCGACTGCTACTGA\n+>ENSSSCT00000008295_susscrofa\n+ATGGACCCGGAGTGCTCCCGGCTCCTCCCGGCTCTCTGTGCCGTCCTGGC\n+AGACCCCCGGCAGCCTGTGGCAGATGATACTTGCTTGGAGAAGCTGCTGG\n+ACTGGTTTAAAACAATAACTGAAGCAGGGTCCAGTCTCCTGGTGCTACAG\n+GAAAATCCCTGCCTGGTGGAGCTGCTGTTCGACGTGCTGAAACCCCAGGA\n+CCTGAGTCCCAGAGTCCTCTCCTTCTCACTCCGCCTCGCAGGCATGTTCG\n+CAGCCCAGGAAGACTGCTTCCAGTACCTTCAGCAGGGGGAGTTGCTGCCC\n+AGGCTGTTTGGGGAGGCGGGCCCCCTGGGAGGAGCGGCCTGGACGGCCCC\n+GACCGTGCGCAGCGGCTGGATCCAGGGCCTGCGCTCCCTGGCGCAGCACC\n+CTCGCGCCCTGCCCTTCCTTGCCGACTGTGGTGCCGTTGACACCATCTTC\n+TCCCTGCAGGGAGATTCCAGCCTGTTTGTGGCCTCGGCAGCCGGGCAGCT\n+CCTGGTGCACATCCTGGACTTGGCGATGCGAGCCCCGCCCCGGGGACACC\n+CCGGCCCGCAGGCGTGTGACGGGCCAGCGTGCGCCCAGAAGATCGTGTGT\n+CACCTCGAAGACTCCCTGCGCGCCGCAGCCGCCCCGCAGCTCACGCAGGC\n+CCTGAATGTCCTGACCACCACGTTCGGGCACTGCCACGGCCTTTGGACGC\n+CGGGCCTTTGGGGGCGGCTGAGCCCTCTTGTGGGGCACCTGCTCGAGAAA\n+GACCCCGTCCCAGCCTCGCACGCGCTCGTGGACCTCCTCCTCAGCGTGGC\n+CCGGTCCCCTGTGCTGAGTTCTGAGAGTGGCCCGTGGGAGACTTTGGCGC\n+TGACTCTGAGCCGCTTGAGCCCGATGCAAGCAGGGCCTCTGGCTTTGGGG\n+ATCCTGAAGCTGCAGGACTGCCCACAGGCCTTGAGGACCCAGGCCTCTGG\n+CGTCCTCCTCCAGCCCCTGGCCTGTGTCCTGAAAGCTGCTGTGCAGGGCC\n+CCGGACGCCCAGGTAGGCTGCTGGGGAAGGGGGGCAGGTGCAGGATGGCA\n+GGACCGTGGGGGCCTGAGCGCATCCTTGGGGCCGGCGCAGGCTGTCATCC\n+CAGGTGTGACTGCTGCTCCTGTTGCCACCCTGGAANCAGTGCCCTTGGCC\n+TGGCCCAAGAGGCCCGCCTGAGGCTGTGTGACAATGCTGCGATCCCCCGC\n+TCTGACCTGGGGGGCCAATTCTGTGGCCACCTGGTGGCCTGTGTCCGAGT\n+CCAGCGAGCGGCCCTGGATTTCCTGGGGACGCTGTCTCAGAGGGCGGGCC\n+CCCAAGAGCTGGTGACGCAGGTTTCTGCTGTCCTCCTGGAGTACCTTTCA\n+GGCCCTGACTCCAGCCCCACGGTTCTGAAGAAGGCCTTCCAGGCCTCACT\n+CGGGTGGCTCCTGAGCTCACCCAAGACCCCCGGCTGCTGCGATCTGGACC\n+CCCACGCCCAGCAGTTCCTCAGAGAGCTGCTCCCTGTGCTGCAGAAGCGC\n+CTGTGCAGCCCCTGCTGGGAGGTGAGGGACTCAGGCCTTGAGTTCCTGAC\n+CCAGATGGCCAGACACTGGGGAGGGCAGGCCGCCTTCAGACAGGTGCTCC\n+TTGCTTCCGAGGTGCCCAGGCTCACCAGGCAGCTCCTGCAAGACCCCGAG\n+AGTTACGTCCGCGCAAGCGCAGTGACCGCCACAGGGCAGCTGTCTAGCTG\n+GGGGCTGCATGCTGCCCCCGCCGGCCCTGAGCACCCAGGGGTCCAGCAGA\n+AGAGCCTCCTGTCGGAGCTCCTGCACGTCCTCGCCACAGACTCGGAGGGC\n+TTCCCCCGGAGGGCCGTCATGCAGGTCTTCACCGAGTGGCTGAGGGGCGG\n+CCATGCTGACGTGGCCGAGGACCCAGAGCAGTTTGTGGCCGGAGTGCTCC\n+AGGCCGCGAGCAGGGACCTGGACTGGGAGGTCCGGGCCCAGGGCCTCGAG\n+CTGGCGCTGGTGTTCCTGGAGCAGCTGCTGGGCCCGCCCGGCGTGCGCTG\n+TCCCTACGCCGTGGCCCTGCCCAAGGCAGCCCCGCCTGGCACGCTGGCCC\n+AGGCCTTGCAGGCACTGTGCCGAGTGCAGCTCTTCGAGTTCGCCTTCCGT\n+GCCTTGTTCGACTGCGACCGACCTGTGGCGCAGAAGTCCTGTGACCTCCT\n+CCTCTTCCTGAAGGCCAAGGCCACTTCCTGCGGCACCCCCCAGGAGGAAC\n+GGGACAGCCCCGACGTGTCCTCCGTGGAGGCCACACTGCAGAAGTGGCAG\n+GCAGGGGAGCACGGACACCCCCTGGGGGACCTGGAGCCCGCGGCTGTTGT\n+GGCCGTGCTCAGGTCCATGGACTTGGAAGGCCTTCAGGACACACTGGCCG\n+AGAGCAGTGACCACGTGGAGAGGAGCCCCCAGTCGCTCCTGCAGGACATG\n+CTGGCCACCGTGGGCGTCCTCGGGGAGAATGAGGCCGACTGCTACTGA\n' |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/3.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/3.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| b'@@ -0,0 +1,270 @@\n+>ENSPTRT00000019089_pantroglodytes\n+ATAGGCACCGGGGGCCGGCGGGGGGCGGCGGCCGCGCCGCTGCTGGTGGC\n+GGTGGCCGCGCTTCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGAGG\n+TGTGTCCCGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTG\n+GAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAA\n+AACGAGGCCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATAATGA\n+TCACTGATTACTTGCTGCTCTTCCGGGTCTATGGGCTCGAGAGCCTGAAG\n+GACCTGTTCCCCAACCTCACGGTCATCCGGGGGTCACGACTGTTCTTTAA\n+CTACGCGCTGGTCATCTTCGAGATGGTTCACCTCAAGGAACTCGGCCTCT\n+ACAACCTGATGAACATCACCCGGGGTTCTGTCCGCATCGAGAAGAACAAT\n+GAGCTCTGTTACTTGGCCACTATCGACTGGTCCCGTATCCTGGATTCCGT\n+GGAGGATAATTACATCGTGTTGAACAAAGATGACAACGAGGAGTGTGGAG\n+ACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTC\n+ATCAACGGGCAGTTTGTCGAACGATGTTGGACTCACAGTCACTGCCAGAA\n+AGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCT\n+GTTGCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACC\n+AAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGAC\n+CTGCCCGCCCCCGTACTACCACTTCCAGGACTGGCGCTGTGTGAACTTCA\n+GCTTCTGCCAGGACCTGCACCACAAATGCAAGAACTCGCGGAGGCAGGGC\n+TGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTC\n+CGGGTACACGATGAATTCCAGCAACTTGCTGTGCACCCCATGCCTGGGTC\n+CCTGTCCCAAGGTGTGCCACCTCCTAGAAGGCGAGAAGACCATCGACTCG\n+GTGACGTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCT\n+GATCATCAACATTCGAGGAGGCAACAATCTGGCAGCTGAGCTAGAAGCCA\n+ACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGATCC\n+TACGCTCTGGTGTCACTTTCCTTCTTCCGGAAGTTACGTCTGATTCGAGG\n+AGAGACCTTGGAAATCGGGAACTACTCCTTCTATGCCTTGGACAACCAGA\n+ACCTAAGGCAGCTCTGGGATTGGAGCAAACACAACCTCACCATCACTCAG\n+GGGAAACTCTTCTTCCACTATAACCCCAAACTCTGCTTGTCAGAAATCCA\n+CAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACA\n+TTGCCCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAATGAGTTACTT\n+AAATTTTCTTACATTCGGACATCTTTTGACAAGATCTTGCTGAGATGGGA\n+GCCGTACTGGCCCCCCGACTTCCGAGACCTCTTGGGGTTCATGCTGTTCT\n+ACAAAGAGGCCCCTTATCAAAATGTGACGGAGTTCGACGGGCAGGATGCA\n+TGTGGTTCCAACAGTTGGACGGTGGTAGACATTGACCCACCCCTGAGGTC\n+CAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTGA\n+AGCCCTGGACCCAGTATGCCATCTTCGTGAAGACCCTGGTCACCTTTTCG\n+GATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGAC\n+AGATGCCACCAACCCCTCCGTGCCCCTGGATCCAATCTCAGTGTCTAACT\n+CATCATCCCAGATTATTTTGAAGTGGAAACCCCCCTCCGACCCCAATGGC\n+AACATCACCCACTACCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA\n+GCTGTTCGAACTGGATTATTGCCTCAAATGGTGTGTGTGGTGTGTGTGTG\n+TGGTTGTTTGTTTGTGGAGTGTGTGTGAGTATGAGGATTCGGCCGGCGAA\n+TGCTGCTCCTGTCCAAAGACAGACTCTCAGATCCTGAAGGAGCTGGAGGA\n+GTCCTCGTTTAGGAAGACGTTTGAGGATTACCTGCACAACGTGGTTTTCG\n+TCCCCAGAAAAACCTCTTCAGGCACTGGTGCCGAGGACCCTAGGCCATCT\n+CGGAAACGCAGGTCCCTTGGCGATGTTGGGAATGTGACGGTGGCCGTGCC\n+CACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTC\n+CGGAGGAGCACAGGCCTTTTGAGAAGGTGGTGAACAAGGAGTCGCTGGTC\n+ATCTCCGGCTTGCGACACTTCACGGGCTATCGCATCGAGCTGCAGGCTTG\n+CAACCAGGACACCCCTGAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTG\n+CCAGGACCATGCCTGAAGCCAAGGCTGATGACATTGTCGGCCCTGTGACG\n+CATGAAATCTTTGAGAACAACGTTGTCCACTTGATGTGGCAGGAGCCGAA\n+GGAGCCCAATGGTCTGATCGTGCTGTATGAAGTGAGTTATCGGCGATATG\n+GTGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAG\n+CGGGGCTGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGCGTGCGAGT\n+CCGGGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGGAACCCACCTATT\n+TCTACGTGACAGACTATTTAGATGTCCCGTCAAATATTGCAAAAATTATC\n+ATCGGCCCCCTCATCTTTGTCTTTCTCTTCAGTGTTGTGATTGGAAGTAT\n+TTATCTATTCCTGAGAAAGAGGCAGCCAGATGGGCCGCTGGGACCGCTTT\n+ACGCTTCTTCAAACCCTGAGTATCTCAGTGCCAGTGATGTGTTTCCATGC\n+TCTGTGTACGTGCCGGACGAGTGGGAGGTGCCTCGAGAGAAGATCACCCT\n+CCTTCGAGAGCTGGGGCAGGGCTCCTTCGGCATGGTGTATGAGGGCAATG\n+CCAGGGACATCATCAAGGGTGAGGCAGAGACCCGCGTGGCGGTGAAGACG\n+GTCAACGAGTCAGCCAGTCTCCGAGAGCGGATTGAGTTCCTCAATGAGGC\n+CTCGGTCATGAAGGGCTTCACCTGCCATCATGTGGTGCGCCTCCTGGGAG\n+TGGTGTCCAAGGGCCAGCCCACACTGGTGGTGATGGAGCTGATGGCTCAC\n+GGAGACCTGAAGAGCTACCTCCGTTCTCTGCGGCCAGAGGCTGAGAATAA\n+TCCCGGCCGCCCTCCCCCTACCCTTCAAGAGATGATTCAGATGGCGGCAG\n+AGATTGCTGATGGGATGGCCTACCTGAACGCCAAGAAGTTTGTGCATCGG\n+GACCTGGCAGCGAGAAACTGCATGGTCGCCCATGATTTTACTGTCAAAAT\n+TGGAGACTTTGGAATGACCAGAGACATCTATGAAACGGATTACTACCGGA\n+AAGGGGGCAAGGGTCTGCTCCCTGTACGGTGGATGGCGCCAGAGTCCCTG\n+AAGGATGGGGTCTTCACCACTTCTTCTGACATGTGGTCCTTTGGCGTGGT\n+CCTTTGGGAAATCACCAGCTTGGCAGAACAGCCTTACCAAGGCCTGTCTA\n+ATGAACAGGTGTTGAAATTTGTCATGGATGGAGGGTATCTGGATCAACCC\n+GACAACTGTCCAGAGAGAGTCACTGACCTCATGCGCATGTGCTG'..b'\n+GATCATCAACATTCGAGGAGGCAACAATCTGGCAGCTGAGCTAGAAGCCA\n+ACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGATCC\n+TACGCTCTGGTGTCACTTTCCTTCTTCCGGAAGTTACGTCTGATTCGAGG\n+AGAGACCTTGGAAATTGGGAACTACTCCTTCTATGCCTTGGACAACCAGA\n+ACCTAAGGCAGCTCTGGGACTGGAGCAAACACAACCTCACCATCACTCAG\n+GGGAAACTCTTCTTCCACTATAACCCCAAACTCTGCTTGTCAGAAATCCA\n+CAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACA\n+TTGCCCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAATGAGTTACTT\n+AAATTTTCTTACATTCGGACATCTTTTGACAAGATCTTGCTGAGATGGGA\n+GCCGTACTGGCCCCCCGACTTCCGAGACCTCTTGGGGTTCATGCTGTTCT\n+ACAAAGAGGCCCCTTATCAGAATGTGACGGAGTTCGACGGGCAGGATGCG\n+TGTGGTTCCAACAGTTGGACGGTGGTAGACATTGACCCACCCCTGAGGTC\n+CAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTCA\n+AGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTTTTCG\n+GATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGAC\n+AGATGCCACCAACCCCTCTGTGCCCCTGGATCCAATCTCAGTGTCTAACT\n+CATCATCCCAGATTATTCTGAAGTGGAAACCACCCTCCGACCCCAATGGC\n+AACATCACCCACTACCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA\n+GCTGTTCGAGCTGGATTATTGCCTCAAAGGGCTGAAGCTGCCCTCGAGGA\n+CCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGT\n+GAGTATGAGGATTCGGCCGGCGAATGCTGCTCCTGTCCAAAGACAGACTC\n+TCAGATCCTGAAGGAGCTGGAGGAGTCCTCGTTTAGGAAGACGTTTGAGG\n+ATTACCTGCACAACGTGGTTTTCGTCCCCAGAAAAACCTCTTCAGGCACT\n+GGTGCCGAGGACCCTAGGCCATCTCGGAAACGCAGGTCCCTTGGCGATGT\n+TGGGAATGTGACGGTGGCCGTGCCCACGGTGGCAGCTTTCCCCAACACTT\n+CCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACAGGCCTTTTGAGAAG\n+GTGGTGAACAAGGAGTCGCTGGTCATCTCCGGCTTGCGACACTTCACGGG\n+CTATCGCATCGAGCTGCAGGCTTGCAACCAGGACACCCCTGAGGAACGGT\n+GCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGCCTGAAGCCAAGGCT\n+GATGACATTGTTGGCCCTGTGACGCATGAAATCTTTGAGAACAACGTCGT\n+CCACTTGATGTGGCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGCTGT\n+ATGAAGTGAGTTATCGGCGATATGGTGATGAGGAGCTGCATCTCTGCGTC\n+TCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTC\n+ACCGGGGAACTACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGCAACG\n+GCTCTTGGACGGAACCCACCTATTTCTACGTGACAGACTATTTAGACGTC\n+CCGTCAAATATTGCAAAAATTATCATCGGCCCCCTCATCTTTGTCTTTCT\n+CTTCAGTGTTGTGATTGGAAGTATTTATCTATTCCTGAGAAAGAGGCAGC\n+CAGATGGGCCGCTGGGACCGCTTTACGCTTCTTCAAACCCTGAGTATCTC\n+AGTGCCAGTGATGTGTTTCCATGCTCTGTGTACGTGCCGGACGAGTGGGA\n+GGTGTCTCGAGAGAAGATCACCCTCCTTCGAGAGCTGGGGCAGGGCTCCT\n+TCGGCATGGTGTATGAGGGCAATGCCAGGGACATCATCAAGGGTGAGGCA\n+GAGACCCGCGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTCTCCGAGA\n+GCGGATTGAGTTCCTCAATGAGGCCTCGGTCATGAAGGGCTTCACCTGCC\n+ATCACGTGGTGCGCCTCCTGGGAGTGGTGTCCAAGGGCCAGCCCACGCTG\n+GTGGTGATGGAGCTGATGGCTCACGGAGACCTGAAGAGCTACCTCCGTTC\n+TCTGCGGCCAGAGGCTGAGAATAATCCTGGCCGCCCTCCCCCTACCCTTC\n+AAGAGATGATTCAGATGGCGGCAGAGATTGCTGACGGGATGGCCTACCTG\n+AACGCCAAGAAGTTTGTGCATCGGGACCTGGCAGCGAGAAACTGCATGGT\n+CGCCCATGATTTTACTGTCAAAATTGGAGACTTTGGAATGACCAGAGACA\n+TCTATGAAACGGATTACTACCGGAAAGGGGGCAAGGGTCTGCTCCCTGTA\n+CGGTGGATGGCACCGGAGTCCCTGAAGGATGGGGTCTTCACCACTTCTTC\n+TGACATGTGGTCCTTTGGCGTGGTCCTTTGGGAAATCACCAGCTTGGCAG\n+AACAGCCTTACCAAGGCCTGTCTAATGAACAGGTGTTGAAATTTGTCATG\n+GATGGAGGGTATCTGGATCAACCCGACAACTGTCCAGAGAGAGTCACTGA\n+CCTCATGCGCATGTGCTGGCAATTCAACCCCAAGATGAGGCCAACCTTCC\n+TGGAGATTGTCAACCTGCTCAAGGACGACCTGCACCCCAGCTTTCCAGAG\n+GTGTCGTTCTTCCACAGCGAGGAGAACAAGGCTCCCGAGAGTGAGGAGCT\n+GGAGATGGAGTTTGAGGACATGGAGAATGTGCCCCTGGACCGTTCCTCGC\n+ACTGTCAGAGGGAGGAGGCGGGGGGCCGGGATGGAGGGTCCTCGCTGGGT\n+TTCAAGCGGAGCTACGAGGAACACATCCCTTACACACACATGAACGGAGG\n+CAAGAAAAACGGGCGGATTCTGACCTTGCCTCGGTCCAATCCTTCCTAA\n+>ENST00000600492_homosapiens\n+TACAAAGAGGCCCCTTATCAGAATGTGACGGAGTTCGACGGGCAGGATGC\n+GTGTGGTTCCAACAGTTGGACGGTGGTAGACATTGACCCACCCCTGAGGT\n+CCAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTC\n+AAGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTTTTC\n+GGATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGA\n+CAGATGCCACCAACCCCTCTGTGCCCCTGGATCCAATCTCAGTGTCTAAC\n+TCATCATCCCAGATTATTCTGAAGTGGAAACCACCCTCCGACCCCAATGG\n+CAACATCACCCACTACCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTG\n+AGCTGTTCGAGCTGGATTATTGCCTCAAAGGGCGAGTCCAGTCATCAGCT\n+CCGCTGTAA\n+>ENSMUST00000208839_musmusculus\n+NAGACAGATTACTATCGGAAAGGGGGCAAGGGACTGCTTCCTGTGAGGTG\n+GATGTCACCTGAGTCCCTGAAGGATGGAGTCTTTACTGCTTCTTCTGATA\n+TGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACTAGCCTGGCTGAGCAA\n+CCTTATCAAGGCCTGTCTAATGAACAGGTGTTGAAGTTTGTCATGGATGG\n+AGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTGAGATATGAGA\n+TAAAGACACACTGGCCACCCTGA\n' |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/4.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/4.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| b'@@ -0,0 +1,306 @@\n+>ENSMUST00000091291_musmusculus\n+ATGGGCTTCGGGAGAGGATGTGAGACGACGGCTGTGCCATTGCTGGTGGC\n+CGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTGGAGAGG\n+TGTGCCCTGGTATGGACATCCGGAACAACCTGACCAGGCTACATGAGCTG\n+GAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCCTGATGTTCAA\n+GACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGA\n+TCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGAAAGTCTGAAA\n+GACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTCTCTTCTTCAA\n+CTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAGCTGGGGCTTT\n+ATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGAGAAGAATAAT\n+GAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCCTGGATTCTGT\n+GGAGGACAACTACATTGTACTGAACAAAGATGACAACGAGGAATGTGGGG\n+ATGTCTGTCCAGGCACCGCCAAGGGCAAGACCAACTGTCCTGCCACTGTC\n+ATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACAGTCATTGTCAGAA\n+AGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACAGCTGAAGGCCTGT\n+GCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACCTGATGACCCCACC\n+AAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTCAGTGTGTGGAGAC\n+CTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGCTGTGTGAACTTCA\n+GCTTCTGCCAAGACCTTCACTTCAAATGCAGGAACTCTCGGAAGCCTGGC\n+TGCCACCAATACGTCATTCACAACAATAAGTGCATCCCCGAGTGCCCGTC\n+TGGCTATACCATGAATTCCAGCAACTTGATGTGCACCCCATGTCTGGGAC\n+CCTGCCCTAAGGTCTGCCAAATCCTCGAAGGTGAGAAGACCATTGATTCT\n+GTGACATCTGCCCAGGAGCTCCGAGGCTGCACTGTGATCAACGGTAGCCT\n+GATCATCAACATCCGAGGGGGCAACAACCTGGCAGCTGAGCTGGAGGCTA\n+ACCTTGGCCTCATTGAAGAAATTTCGGGATTTCTAAAGATCCGCCGCTCC\n+TATGCTCTGGTATCACTTTCTTTCTTCAGGAAGCTACATCTGATTCGAGG\n+AGAGACCTTGGAAATTGGGAACTATTCTTTTTATGCCTTGGACAACCAGA\n+ACCTGAGGCAACTCTGGGACTGGAGCAAACACAACCTCACCATCACTCAG\n+GGCAAGCTCTTCTTCCATTACAACCCGAAACTCTGCTTGTCTGAAATTCA\n+CAAGATGGAAGAAGTCTCCGGAACTAAGGGCCGTCAGGAGAGGAACGACA\n+TTGCCCTGAAGACCAATGGGGACCAGGCATCGTGTGAAAATGAATTGCTT\n+AAATTTTCTTTCATTCGGACATCTTTTGACAAGATCCTGTTGAGGTGGGA\n+ACCCTACTGGCCCCCCGACTTCCGAGATCTCCTGGGATTCATGTTGTTCT\n+ACAAAGAGGCCCCTTATCAGAATGTGACAGAGTTTGATGGGCAGGATGCT\n+TGTGGCTCCAACAGCTGGACTGTGGTGGATATTGACCCGCCCCAGAGGTC\n+CAACGACCCCAAGTCTCAGACCCCAAGCCACCCTGGGTGGCTGATGCGGG\n+GCCTCAAACCCTGGACCCAATACGCCATCTTTGTGAAGACCTTGGTTACC\n+TTCTCTGATGAACGGCGGACCTATGGAGCCAAAAGTGATATCATCTATGT\n+GCAAACAGATGCCACTAATCCTTCTGTCCCCCTGGATCCCATATCAGTTT\n+CTAATTCCTCATCTCAGATTATCTTAAAGTGGAAGCCCCCCTCTGACCCC\n+AATGGCAACATCACACACTACCTGGTGTACTGGGAGAGGCAAGCAGAGGA\n+CAGCGAGCTGTTTGAGCTGGATTATTGTCTCAAAGGGCTGAAGCTCCCTT\n+CACGGACCTGGTCCCCACCCTTTGAGTCTGATGATTCTCAGAAGCACAAT\n+CAGAGTGAGTATGACGACTCGGCCAGTGAGTGCTGCTCATGCCCTAAGAC\n+TGACTCTCAGATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCT\n+TCGAGGATTACCTGCACAACGTGGTTTTTGTCCCCAGGCCATCCCGAAAG\n+CGAAGATCCCTTGAAGAGGTGGGGAATGTGACAGCCACCACACTCACACT\n+TCCAGATTTCCCCAACGTCTCCTCTACCATTGTGCCCACAAGTCAGGAGG\n+AGCACAGGCCATTTGAGAAAGTGGTGAACAAGGAGTCACTTGTCATCTCT\n+GGCCTGAGACACTTCACTGGGTACCGCATTGAGCTGCAGGCATGCAATCA\n+AGATTCCCCAGATGAGAGGTGCAGTGTGGCTGCCTACGTCAGTGCCCGGA\n+CCATGCCTGAAGCTAAGGCAGATGACATCGTTGGCCCTGTGACTCATGAA\n+ATCTTTGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAAGGAACC\n+TAATGGTCTGATTGTGCTATATGAAGTGAGCTATCGCCGATATGGTGATG\n+AGGAGCTGCACCTCTGTGTCTCCCGGAAGCATTTTGCCCTGGAGCGGGGC\n+TGCAGGCTGCGAGGGCTCTCCCCAGGAAACTACAGTGTTCGAGTCCGGGC\n+TACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCCACCTATTTTTATG\n+TGACTGATTATTTAGATGTCCCATCAAATATTGCCAAAATTATCATTGGA\n+CCCCTCATCTTTGTCTTCCTCTTCAGTGTTGTGATTGGAAGTATTTATCT\n+ATTTCTGAGAAAGAGGCAGCCGGATGGGCCAATGGGACCACTGTATGCAT\n+CTTCAAACCCTGAGTACCTCAGTGCCAGTGATGTGTTTCCATCTTCTGTG\n+TACGTGCCGGACGAGTGGGAGGTGCCTCGAGAGAAGATCACCCTTCTTCG\n+AGAGCTGGGGCAGGGATCCTTTGGTATGGTGTATGAAGGCAATGCCAAGG\n+ATATCATCAAGGGTGAGGCAGAGACCCGTGTTGCGGTTAAGACTGTCAAT\n+GAGTCAGCCAGTCTTCGAGAACGGATCGAGTTCCTCAATGAGGCATCAGT\n+CATGAAGGGATTCACCTGCCATCATGTGGTCCGCCTTCTTGGGGTGGTAT\n+CCAAAGGACAGCCAACGCTGGTAGTGATGGAATTGATGGCTCATGGAGAC\n+CTGAAAAGTCACCTCCGTTCTCTGAGGCCAGATGCTGAGAATAACCCAGG\n+CCGCCCTCCCCCTACCTTGCAAGAAATGATTCAGATGACAGCAGAAATTG\n+CTGATGGCATGGCATACTTGAACGCCAAGAAGTTTGTGCACCGGGACCTG\n+GCAGCTCGAAACTGCATGGTTGCCCATGATTTTACTGTCAAAATTGGAGA\n+CTTTGGAATGACAAGGGACATCTACGAGACAGATTACTATCGGAAAGGGG\n+GCAAGGGACTGCTTCCTGTGAGGTGGATGTCACCTGAGTCCCTGAAGGAT\n+GGAGTCTTTACTGCTTCTTCTGATATGTGGTCCTTTGGGGTGGTCCTTTG\n+GGAAATCACTAGCCTGGCTGAGCAACCTTATCAAGGCCTGTCTAATGAAC\n+AGGTGTTGAAGTTTGTCATGGATGGAGGCTATCTGGATCCCCCTGATAAC\n+TGTCCAGAGAGACTCACTGACCTGATGCGCATGTGCTGGCAGTTCAA'..b'GACTCGGCCAGCGAGTGCTGCTCATGTCCTAAGACTGA\n+CTCTCAGATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCTTCG\n+AGGATTACCTGCACAACGTGGTTTTTGTTCCCAGAAAAACCTCTTCAGGC\n+AATGGTGCTGAGGACACTAGGCCATCCCGAAAGCGAAGATCCCTTGAAGA\n+GGTGGGCAATGTGACAGCCACTACACCCACACTTCCAGATTTTCCCAACA\n+TCTCCTCCACCATCGCGCCCACAAGCCACGAAGAGCACAGACCATTTGAG\n+AAAGTAGTAAACAAGGAGTCACTTGTCATCTCTGGCCTGAGACACTTCAC\n+TGGGTACCGCATTGAGCTGCAGGCATGCAATCAGGACTCCCCAGAAGAGA\n+GGTGCAGCGTGGCTGCCTACGTCAGTGCCCGGACCATGCCTGAAGCTAAG\n+GCAGATGACATCGTTGGCCCTGTGACCCATGAAATCTTTGAGAACAATGT\n+TGTACACTTAATGTGGCAAGAGCCAAAGGAACCTAATGGTCTGATTGTGC\n+TATATGAAGTGAGCTATCGGCGATATGGTGATGAGGAGCTGCACCTCTGT\n+GTCTCCCGGAAGCATTTTGCCCTGGAGCGGGGCTGCAGGCTTCGAGGGCT\n+CTCTCCAGGAAACTACAGTGTTCGAGTCCGGGCTACCTCTCTGGCAGGAA\n+ATGGCTCCTGGACAGAACCCACCTATTTTTATGTGACTGATTATTTAGAT\n+GTCCCATCAAATATTGCCAAAATTATCATCGGGCCCCTCATCTTCGTCTT\n+CCTCTTCAGTGTCGTGATCGGAAGTATTTATCTATTCTTGAGGAAGAGGC\n+AGCCAGATGGGCCAATGGGACCACTGTACGCTTCTTCAAACCCAGAGTAC\n+CTCAGTGCCAGTGATGTCTTTCCATCTTCCGTATACGTTCCGGATGAGTG\n+GGAGGTACCTCGAGAGAAGATCACCCTCCTCCGAGAGCTGGGGCAGGGAT\n+CCTTCGGTATGGTGTACGAAGGCAATGCCAAGGATATCATCAAGGGTGAG\n+GTAGAGACCCGTGTTGCGGTGAAGACGGTCAATGAGTCAGCCAGTCTTCG\n+AGAACGGATCGAGTTCCTCAATGAGGCATCAGTCATGAAGGGCTTCACCT\n+GTCATCACGTGGTCCGCCTTCTTGGGGTGGTGTCCAAAGGCCAGCCCACA\n+TTGGTAGTGATGGAACTGATGGCTCATGGAGACCTGAAAAGTCACCTCCG\n+TTCTCTGCGGCCCGATGCTGAGAACAACCCAGGCCGTCCTCCCCCTACCT\n+TGCAAGAAATGATTCAGATGACAGCAGAAATTGCCGATGGCATGGCATAC\n+TTGAACGCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGGAACTGCAT\n+GGTTGCCCATGATTTTACTGTCAAAATCGGAGACTTTGGAATGACGAGAG\n+ACATCTACGAGACAGATTACTATCGGAAAGGGGGCAAGGGGTTGCTGCCC\n+GTGAGGTGGATGTCACCCGAGTCCCTGAAGGACGGAGTCTTCACTGCTTC\n+TTCCGACATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACCAGCCTGG\n+CTGAGCAACCTTACCAAGGCCTGTCTAATGAACAGGTGTTGAAATTTGTC\n+ATGGATGGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTCAC\n+TGACCTGATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCGACCT\n+TCCTGGAAATCGTCAACCTGCTCAAGGACGACCTCCACCCCAGCTTTCCG\n+GAAGTTTCCTTCTTCTACAGCGAGGAGAACAAGGCTCCCGAGAGTGAAGA\n+GCTGGAGATGGAGTTCGAGGACATGGAGAATGTCCCCTTGGATCGTTCCT\n+CTCACTGTCAGAGAGAAGAGGCTGGATGCCGGGAGGGAGGGTCCTCTCTG\n+AGCATCAAACGGACCTATGATGAACACATCCCCTACACCCACATGAACGG\n+GGGCAAGAAGAATGGGCGGGTCCTCACCCTGCCGAGGTCGAACCCTTCCT\n+AA\n+>ENSSSCT00000014817_susscrofa\n+GTGTGCCCAGGGATGGATATCCGGAATAACCTTACACGGCTGCACGAGTT\n+GGCCAACTGCTCGGTCATCGAAGGACATTTGCAGATCCTGTTGATGTTCA\n+AAACGCGGCCCGAGGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATG\n+ATCACTGATTACTTGCTGCTCTTCCGGGTCTACGGGCTGGAGAGCCTGAA\n+GGACCTGTTCCCCAACCTCACCGTCATCCGGGGCTCACGCCTCTTCTTTA\n+ACTATGCGCTGGTCATCTTTGAGATGGTTCACTTGAAGGAGCTTGGCCTC\n+TACAATTTGATGAACATCACCAGGGGTGCTGTCCGCATCGAGAAGAACAA\n+TGAGCTCTGCTACCTGGCGACCATTGACTGGTCGCGCATCCTGGACTCTG\n+TGGAGGATAATTACATTGTGCTGAACAAAGACGACAACGAGGAGTGTGGG\n+GACATTTGCCCAGGCACTGCGAAGGGCAAGACCAATTGCCCTGCCACCGT\n+CATCAATGGGCAATTTGTCGAGCGGTGTTGGACGCACAGTCACTGCCAGA\n+AAGTGTGCCCGACCATCTGTAAGTCGCACGGCTGCACTGCTGAGGGCCTC\n+TGCTGTCACAGCGAGTGTTTGGGCAACTGCTCTGAGCCAGACGACCCCAC\n+CAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGATGCGTGGAGA\n+CCTGCCCGCCCCCCTACTACCACTTCCAAGACTGGCGCTGCGTGAACTTC\n+AGCTTCTGCCAGGACCTGCACAACAAATGCAAGAACTCAAGGAGGCAGGG\n+CTGCCACCAGTACGTCATTCACAACAACAAGTGTATCCCTGAGTGCCCCT\n+CAGGGTACACGATGAATTCCAGCAACTTGATGTGCACTCCGTGCCTAGGC\n+CCCTGTCCCAAAGTGTGTCACCTCCTGGAAGGCGAGAAGACCATCGACTC\n+AGTGACATCCGCCCAGGAGCTCCGAGGCTGCACCATTATCAACGGGAGCC\n+TAATCATCAACATTCGAGGAGGCAACAACCTGGCAGCCGAACTAGAGGCC\n+AACCTTGGACTCATTGAGGAGATTTCAGGGTACCTGAAAATCCGCCGATC\n+CTATGCCCTCGTGTCACTTTCCTTCTTCCGGAAGTTGCGTCTGATCCGAG\n+GGGAGACGTTGGAAATTGGGAACTATTCTTTCTATGCCTTGGACAACCAG\n+AACCTAAGGCAACTGTGGGACTGGAGCAAACACAACCTCACCATCACTCA\n+GGGGAAACTCTTCTTCCATTATAATCCCAAACTCTGCTTGTCGGAAATTC\n+ACAAGATGGAGGAAGTTTCTGGAACCAAGGGGCGCCAGGAGAGAAATGAT\n+ATTGCCCTGAAGACCAATGGGGACCAGGCGTCCTGTGAAAATGAGTTACT\n+TAAATTTTCTTACATTCGGACATCTTATGACAAGATCTTGCTGAAGTGGG\n+AGCCGTATTGGCCCCCCGACTTCCGAGACCTCCTGGGGTTCATGCTCTTC\n+TACAAAGAGGCCCCTTATCAGAACGTGACGGAGTTTGACGGGCAGGATGC\n+GTGTGGCTCCAACAGCTGGACGGTGGTGGACATTGACCCGCCTACGAGGT\n+CCAATGACCCCAAGTCCCAGAACCATCCTGGGTGGCTGATGCGTGGTCTC\n+AAGCCCTGGACCCAGTATGCCATCTTTGTCAAGACTTTGGTCACCTTTTC\n+TGATGAACGACGCACCTATGGAGCCAAGAGTGACATCATCTACGTCCAGA\n+CAGATGCCACAAGTAAGCATGTC\n' |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/CDS.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/CDS.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| b'@@ -0,0 +1,1266 @@\n+>ENST00000338702_homosapiens\n+ATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGTCGTGATCGGA\n+GGTGGCATTTCAGGACTATCTGCTGCCAAACTCTTGACTGAATATGGCGTTAGTGTTTTG\n+GTTTTAGAAGCTCGGGACAGGGTTGGAGGAAGAACATATACTATAAGGAATGAGCATGTT\n+GATTACGTAGATGTTGGTGGAGCTTATGTGGGACCAACCCAAAACAGAATCTTACGCTTG\n+TCTAAGGAGCTGGGCATAGAGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTCAATAT\n+GTCAAGGGGAAAACATATCCATTTCGGGGCGCCTTTCCACCAGTATGGAATCCCATTGCA\n+TATTTGGATTACAATAATCTGTGGAGGACAATAGATAACATGGGGAAGGAGATTCCAACT\n+GATGCACCCTGGGAGGCTCAACATGCTGACAAATGGGACAAAATGACCATGAAAGAGCTC\n+ATTGACAAAATCTGCTGGACAAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATC\n+AATGTGACCTCTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCAG\n+TGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGTGGCCAGGAACGGAAGTTTGTA\n+GGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTCCTCGGAGACCAAGTGAAGCTG\n+AACCATCCTGTCACTCACGTTGACCAGTCAAGTGACAACATCATCATAGAGACGCTGAAC\n+CATGAACATTATGAGTGCAAATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAG\n+ATTCACTTCAGACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGGCTTCCAATG\n+GGAGCTGTCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGAAGAAGGATTAC\n+TGTGGCTGCATGATCATTGAAGATGAAGATGCTCCAATTTCAATAACCTTGGATGACACC\n+AAGCCAGATGGGTCACTGCCTGCCATCATGGGCTTCATTCTTGCCCGGAAAGCTGATCGA\n+CTTGCTAAGCTACATAAGGAAATAAGGAAGAAGAAAATCTGTGAGCTCTATGCCAAAGTG\n+CTGGGATCCCAAGAAGCTTTACATCCAGTGCATTATGAAGAGAAGAACTGGTGTGAGGAG\n+CAGTACTCTGGGGGCTGCTACACGGCCTACTTCCCTCCTGGGATCATGACTCAATATGGA\n+AGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGGGCACAGAGACTGCCACAAAG\n+TGGAGCGGCTACATGGAAGGGGCAGTTGAGGCTGGAGAACGAGCAGCTAGGGAGGTCTTA\n+AATGGTCTCGGGAAGGTGACCGAGAAAGATATCTGGGTACAAGAACCTGAATCAAAGGAC\n+GTTCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGGC\n+CTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTGTGCTGTACAAA\n+TACAAGCTCCTGCCACGGTCTTGA\n+>ENST00000542639_homosapiens\n+ATGGGGAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGACAAATGGGAC\n+AAAATGACCATGAAAGAGCTCATTGACAAAATCTGCTGGACAAAGACTGCTAGGCGGTTT\n+GCTTATCTTTTTGTGAATATCAATGTGACCTCTGAGCCTCACGAAGTGTCTGCCCTGTGG\n+TTCTTGTGGTATGTGAAGCAGTGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGT\n+GGCCAGGAACGGAAGTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTC\n+CTCGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTCAAGTGACAAC\n+ATCATCATAGAGACGCTGAACCATGAACATTATGAGTGCAAATACGTAATTAATGCGATC\n+CCTCCGACCTTGACTGCCAAGATTCACTTCAGACCAGAGCTTCCAGCAGAGAGAAACCAG\n+TTAATTCAGCGGCTTCCAATGGGAGCTGTCATTAAGTGCATGATGTATTACAAGGAGGCC\n+TTCTGGAAGAAGAAGGATTACTGTGGCTGCATGATCATTGAAGATGAAGATGCTCCAATT\n+TCAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCATGGGCTTCATT\n+CTTGCCCGGAAAGCTGATCGACTTGCTAAGCTACATAAGGAAATAAGGAAGAAGAAAATC\n+TGTGAGCTCTATGCCAAAGTGCTGGGATCCCAAGAAGCTTTACATCCAGTGCATTATGAA\n+GAGAAGAACTGGTGTGAGGAGCAGTACTCTGGGGGCTGCTACACGGCCTACTTCCCTCCT\n+GGGATCATGACTCAATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCG\n+GGCACAGAGACTGCCACAAAGTGGAGCGGCTACATGGAAGGGGCAGTTGAGGCTGGAGAA\n+CGAGCAGCTAGGGAGGTCTTAAATGGTCTCGGGAAGGTGACCGAGAAAGATATCTGGGTA\n+CAAGAACCTGAATCAAAGGACGTTCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAGG\n+AACCTGCCCTCTGTTTCTGGCCTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCC\n+CTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCCACGGTCTTGA\n+>ENSPTRT00000040520_pantroglodytes\n+ATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGTCGTGATCGGA\n+GGTGGCATTTCAGGACTATCTGCTGCCAAACTCTTGACTGAATATGGCGTTAGTGTTTTA\n+GTTTTAGAAGCTCGGGACAGGGTTGGAGGAAGAACATATACTATAAGGAATGAGCATGTT\n+GATTACGTAGATGTTGGTGGAGCTTATGTGGGACCAACCCAAAACAGAATCTTACGCTTG\n+TCTAAGGAGCTGGGCATAGAGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTCAATAT\n+GTCAAGGGGAAAACATATCCATTTCGGGGCGCCTTTCCACCAGTATGGAATCCCATTGCA\n+TATTTGGATTACAATAATCTGTGGCGGACAATAGATAACATGGGGAAGGAGATTCCAAAT\n+GATGCACCCTGGGAGGCTCAACATGCTGACGAATGGGACAAAATGACCATGAAAGAGCTC\n+ATTGACAAAATCTGCTGGACAAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATC\n+AATGTGACCTCTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCAG\n+TGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGCGGCCAGGAACGGAAGTTTGTA\n+GGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTCCTTGGAGACCAAGTGAAGCTG\n+AACCATCCTGTCACTCATGTTGACCAGTCAAGTGACAACATCATCATAGAGACACTGAAC\n+CATGAACATTATGAGTGCAAATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAG\n+ATTCACTTCAGACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGTCTTCCAATG\n+GGAGCTATCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGAAGAAGGATTAC\n+TGTGGCTGCATGATCATTGAAGATGAAG'..b'AAGCACAATCAG\n+AGTGAGTATGACGACTCGGCCAGCGAGTGCTGCTCATGTCCTAAGACTGACTCTCAGATC\n+CTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCTTCGAGGATTACCTGCACAACGTG\n+GTTTTTGTTCCCAGAAAAACCTCTTCAGGCAATGGTGCTGAGGACACTAGGCCATCCCGA\n+AAGCGAAGATCCCTTGAAGAGGTGGGCAATGTGACAGCCACTACACCCACACTTCCAGAT\n+TTTCCCAACATCTCCTCCACCATCGCGCCCACAAGCCACGAAGAGCACAGACCATTTGAG\n+AAAGTAGTAAACAAGGAGTCACTTGTCATCTCTGGCCTGAGACACTTCACTGGGTACCGC\n+ATTGAGCTGCAGGCATGCAATCAGGACTCCCCAGAAGAGAGGTGCAGCGTGGCTGCCTAC\n+GTCAGTGCCCGGACCATGCCTGAAGCTAAGGCAGATGACATCGTTGGCCCTGTGACCCAT\n+GAAATCTTTGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAAGGAACCTAATGGT\n+CTGATTGTGCTATATGAAGTGAGCTATCGGCGATATGGTGATGAGGAGCTGCACCTCTGT\n+GTCTCCCGGAAGCATTTTGCCCTGGAGCGGGGCTGCAGGCTTCGAGGGCTCTCTCCAGGA\n+AACTACAGTGTTCGAGTCCGGGCTACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCC\n+ACCTATTTTTATGTGACTGATTATTTAGATGTCCCATCAAATATTGCCAAAATTATCATC\n+GGGCCCCTCATCTTCGTCTTCCTCTTCAGTGTCGTGATCGGAAGTATTTATCTATTCTTG\n+AGGAAGAGGCAGCCAGATGGGCCAATGGGACCACTGTACGCTTCTTCAAACCCAGAGTAC\n+CTCAGTGCCAGTGATGTCTTTCCATCTTCCGTATACGTTCCGGATGAGTGGGAGGTACCT\n+CGAGAGAAGATCACCCTCCTCCGAGAGCTGGGGCAGGGATCCTTCGGTATGGTGTACGAA\n+GGCAATGCCAAGGATATCATCAAGGGTGAGGTAGAGACCCGTGTTGCGGTGAAGACGGTC\n+AATGAGTCAGCCAGTCTTCGAGAACGGATCGAGTTCCTCAATGAGGCATCAGTCATGAAG\n+GGCTTCACCTGTCATCACGTGGTCCGCCTTCTTGGGGTGGTGTCCAAAGGCCAGCCCACA\n+TTGGTAGTGATGGAACTGATGGCTCATGGAGACCTGAAAAGTCACCTCCGTTCTCTGCGG\n+CCCGATGCTGAGAACAACCCAGGCCGTCCTCCCCCTACCTTGCAAGAAATGATTCAGATG\n+ACAGCAGAAATTGCCGATGGCATGGCATACTTGAACGCCAAGAAGTTTGTGCACCGGGAC\n+CTGGCAGCTCGGAACTGCATGGTTGCCCATGATTTTACTGTCAAAATCGGAGACTTTGGA\n+ATGACGAGAGACATCTACGAGACAGATTACTATCGGAAAGGGGGCAAGGGGTTGCTGCCC\n+GTGAGGTGGATGTCACCCGAGTCCCTGAAGGACGGAGTCTTCACTGCTTCTTCCGACATG\n+TGGTCCTTTGGGGTGGTCCTTTGGGAAATCACCAGCCTGGCTGAGCAACCTTACCAAGGC\n+CTGTCTAATGAACAGGTGTTGAAATTTGTCATGGATGGAGGCTATCTGGATCCCCCTGAT\n+AACTGTCCAGAGAGACTCACTGACCTGATGCGCATGTGCTGGCAGTTCAACCCCAAGATG\n+AGGCCGACCTTCCTGGAAATCGTCAACCTGCTCAAGGACGACCTCCACCCCAGCTTTCCG\n+GAAGTTTCCTTCTTCTACAGCGAGGAGAACAAGGCTCCCGAGAGTGAAGAGCTGGAGATG\n+GAGTTCGAGGACATGGAGAATGTCCCCTTGGATCGTTCCTCTCACTGTCAGAGAGAAGAG\n+GCTGGATGCCGGGAGGGAGGGTCCTCTCTGAGCATCAAACGGACCTATGATGAACACATC\n+CCCTACACCCACATGAACGGGGGCAAGAAGAATGGGCGGGTCCTCACCCTGCCGAGGTCG\n+AACCCTTCCTAA\n+>ENSSSCT00000014817_susscrofa\n+GTGTGCCCAGGGATGGATATCCGGAATAACCTTACACGGCTGCACGAGTTGGCCAACTGC\n+TCGGTCATCGAAGGACATTTGCAGATCCTGTTGATGTTCAAAACGCGGCCCGAGGATTTC\n+CGAGACCTCAGTTTCCCCAAACTCATCATGATCACTGATTACTTGCTGCTCTTCCGGGTC\n+TACGGGCTGGAGAGCCTGAAGGACCTGTTCCCCAACCTCACCGTCATCCGGGGCTCACGC\n+CTCTTCTTTAACTATGCGCTGGTCATCTTTGAGATGGTTCACTTGAAGGAGCTTGGCCTC\n+TACAATTTGATGAACATCACCAGGGGTGCTGTCCGCATCGAGAAGAACAATGAGCTCTGC\n+TACCTGGCGACCATTGACTGGTCGCGCATCCTGGACTCTGTGGAGGATAATTACATTGTG\n+CTGAACAAAGACGACAACGAGGAGTGTGGGGACATTTGCCCAGGCACTGCGAAGGGCAAG\n+ACCAATTGCCCTGCCACCGTCATCAATGGGCAATTTGTCGAGCGGTGTTGGACGCACAGT\n+CACTGCCAGAAAGTGTGCCCGACCATCTGTAAGTCGCACGGCTGCACTGCTGAGGGCCTC\n+TGCTGTCACAGCGAGTGTTTGGGCAACTGCTCTGAGCCAGACGACCCCACCAAGTGCGTG\n+GCCTGCCGCAACTTCTACCTGGACGGCAGATGCGTGGAGACCTGCCCGCCCCCCTACTAC\n+CACTTCCAAGACTGGCGCTGCGTGAACTTCAGCTTCTGCCAGGACCTGCACAACAAATGC\n+AAGAACTCAAGGAGGCAGGGCTGCCACCAGTACGTCATTCACAACAACAAGTGTATCCCT\n+GAGTGCCCCTCAGGGTACACGATGAATTCCAGCAACTTGATGTGCACTCCGTGCCTAGGC\n+CCCTGTCCCAAAGTGTGTCACCTCCTGGAAGGCGAGAAGACCATCGACTCAGTGACATCC\n+GCCCAGGAGCTCCGAGGCTGCACCATTATCAACGGGAGCCTAATCATCAACATTCGAGGA\n+GGCAACAACCTGGCAGCCGAACTAGAGGCCAACCTTGGACTCATTGAGGAGATTTCAGGG\n+TACCTGAAAATCCGCCGATCCTATGCCCTCGTGTCACTTTCCTTCTTCCGGAAGTTGCGT\n+CTGATCCGAGGGGAGACGTTGGAAATTGGGAACTATTCTTTCTATGCCTTGGACAACCAG\n+AACCTAAGGCAACTGTGGGACTGGAGCAAACACAACCTCACCATCACTCAGGGGAAACTC\n+TTCTTCCATTATAATCCCAAACTCTGCTTGTCGGAAATTCACAAGATGGAGGAAGTTTCT\n+GGAACCAAGGGGCGCCAGGAGAGAAATGATATTGCCCTGAAGACCAATGGGGACCAGGCG\n+TCCTGTGAAAATGAGTTACTTAAATTTTCTTACATTCGGACATCTTATGACAAGATCTTG\n+CTGAAGTGGGAGCCGTATTGGCCCCCCGACTTCCGAGACCTCCTGGGGTTCATGCTCTTC\n+TACAAAGAGGCCCCTTATCAGAACGTGACGGAGTTTGACGGGCAGGATGCGTGTGGCTCC\n+AACAGCTGGACGGTGGTGGACATTGACCCGCCTACGAGGTCCAATGACCCCAAGTCCCAG\n+AACCATCCTGGGTGGCTGATGCGTGGTCTCAAGCCCTGGACCCAGTATGCCATCTTTGTC\n+AAGACTTTGGTCACCTTTTCTGATGAACGACGCACCTATGGAGCCAAGAGTGACATCATC\n+TACGTCCAGACAGATGCCACAAGTAAGCATGTC\n' |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSCAFT00000022939_canisfamiliaris.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSCAFT00000022939_canisfamiliaris.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSCAFT00000022939_canisfamiliaris +ATGGCGAGTAGAGAGAAGACGAGTATCGAGGGCCACATGTTTGACGTAGT +CGTGATAGGAGGCGGCATCTCAGGATTGTCTGCTGCCAAACTCTTAGCCG +AACATGAAGTTGATGTCTTAGTTTTAGAAGCACGAGATAGAGTTGGAGGA +AGAACATACACCGTGAGGAATGAACATGTCGATTACGTAGATGTTGGTGG +GGCTTATGTAGGACCAACTCAGAACAGAATCTTACGACTATCTAAGGAGC +TGGGTCTAGAGACTTACAAAGTGAACGTAAATGAGCGTCTTGTACAGTAT +GTCAAGGGGAAAACTTACCCATTCCGAGGAGCCTTTCCTCCGGTATGGAA +TCCTATCGCATATTTGGATTACAACAACCTGTGGCGGACAATGGATAACA +TGGGGAAGGAGATTCCAGCAGATGCACCATGGGAGGCCCCACATGCCGAG +GAATGGGACAAGATGACTATGAAGGATCTTATCGATAAAATCTGCTGGAC +AAAGACTGCTAGGAGGTTTGCATCCCTCTTTGTGAATATCAATGTGACCT +CTGAGCCCCACGAGGTGTCTGCGCTCTGGTTCCTGTGGTATGTGAAGCAG +TGCGGAGGTACCACTCGGATATTCTCGGTGACCAATGGAGGCCAGGAACG +GAAGTTTGTGGGAGGATCCGGTCAAGTGAGTGAACGGATAATGGAGCGCC +TTGGGGACAGAGTCAAGCTGAAGCGCCCTGTCACCTATGTTGACCAGTCA +GATGACAACATCATCATAGAGACACTGAATCATGAACTTTATGAGTGCAA +ATACGTGATTAGTGCCATCCCTCCAACTTTGACTGCCAAGATCCACTTCA +GACCAGAGCTTCCATCAGAGAGAAATCAGTTAATTCAGCGTCTTCCAATG +GGAGCTATCATCAAGTGTATGATGTATTACAAGGAGGCCTTTTGGAAGAA +GAAGGATTACTGTGGCTGTATGATCATTGAAGACGAGGAAGCTCCAATTT +CAATAACCCTGGATGACACCAAGCCAGATGGATCACTGCCCGCTATCATG +GGCTTCATACTTGCCAGAAAAGCTGACCGACTTGCCAAGCTCCATAAAGA +AATAAGGAAGAGGAAAATCTGTGAGCTCTATGCCAAAGTGCTAGGATCCC +AAGAAGCTTTACAACCCGTACACTATGAAGAGAAGAACTGGTGCGAGGAG +CAGTACTCCGGGGGCTGCTATACCGCCTACTTCCCCCCTGGGATCATGAC +TCACTACGGAAGGGTGATCCGCCAGCCATTTGGCAGGATTTACTTTGCTG +GCACTGAGACGGCAACACACTGGAGCGGTTATATGGAAGGAGCTGTAGAG +GCTGGGGAACGGACAGCTAGAGAGGTCTTAAATGCTCTCGGGAGGGTGGC +AGAGAAAGACCTGAAGACCCAGGAACCTGAATCAAAGGATGTTCCAGCTA +TGGAAATCACCCACACCTTCTGGGAGAGGAACCTGCCATCGGTGACAGGC +CTGCTGAAGCTCATTGGATTTACCACATCAGTAACTGCCCTGTGGATTGT +GGCGTACAAATTCAGGCTGCTGAGACGATCCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSCAFT00000022963_canisfamiliaris.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSCAFT00000022963_canisfamiliaris.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSCAFT00000022963_canisfamiliaris +ATGAGCGGCAAGTGCGACGTGGTCATGGTGGGGGGCGGCATCTCAGGCAT +GGCAGCAGCCAAACTTCTGCATGATTTTGGCCTGAACGTGGTTGTTCTGG +AGGCCCGGGACCGAGTGGGAGGCAGGACTTACACCATCAGGAACCAAAAG +GTTAAATATTTGGACCTTGGAGGATCTTATGTTGGGCCAACTCAGAATTG +TATCTTAAGGTTAGCCAAGGAGCTAGGATTGGAGACCTACAAAGTGAATG +AAGTAGAGCGTCTCATCCATCATGTAAAGGGCAAATCGTACCCCTTCAGG +GGCCCCTTCCCACCTGTATGGAACCCAATTGCATACCTAGATCATAACAA +CCTCTGGAGGACGATGGACGACATGGGGCGAGAGATTCCCAGTGATGCCC +CATGGAAGGCACCTCTTGCGGAGGAGTGGGACCACATGACAATGAAGGAG +CTTCTGGACAAGATCTGCTGGACAGAATCTGCCAAGCAACTTGCTACTCT +CTTTGTGAATCTGTGTGTCACTGCAGAGACCCATGAGGTCTCTGCTCTCT +GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGCACGACCAGGATCATCTCA +ACAACCAATGGAGGGCAGGAGAGAAAATTTGTGGGCGGATCTGGTCAAGT +GAGTGAACGGATAATGGACCTCCTTGGAGACCAAGTGAAGCTGGAGAGGC +CTGTGACCCACATTGACCAGACAGGAGAAAATGTCCTTGTGGAGACCCTA +AACCATGAGGTGTATGAGGCTAAGTATGTGATTAGTGCCATTCCTCCTAC +TCTGGGCATGAAGATTCATTTCAACCCCCCTCTGCCAATGATGAGAAACC +AGCTGATCACTCGTGTGCCTTTGGGCTCAGTCATCAAGTGCATAGTTTAT +TATAAAGAGCCCTTCTGGAGGAAAAAGGATTACTGTGGAACCATGATTAT +CGAAGGAGAGGAAGCTCCAATTGCTTACACGTTGGATGATACCAAACCTG +ATGGCAACTATGCCGCCATAATGGGATTTATCCTTGCCCACAAAGCCAGA +AAACTGGCACGTCTTACCAAAGATGAAAGGATGAAGAAACTTTGTGAGCT +CTATGCAAAAGTCCTGGGTTCCCAAGAAGCTTTGCAGCCCGTACACTACG +AAGAGAAGAACTGGTGCGAGGAGCAGTACTCCGGGGGCTGCTACACCACC +TACTTTCCCCCTGGGATCATGACTCAATATGGAAGGGTTCTACGACAGCC +TGTGGGCAGGATTTATTTTGCAGGCACGGAGACTGCCACCCACTGGAGTG +GCTACATGGAGGGCGCTGTGGAGGCTGGAGAGAGAGCGGCCCGAGAGATC +CTGCATGCCATGGGGAAGATCCCAGAGGATGAAATCTGGCAGTCAGAACC +AGAATCAGTGGATGTCCCTGCGCAGCCCATCACCACGACCTTCTTGGAGA +GACATTTGCCCTCTGTGCCAGGCCTGCTGAGGCTGATCGGATTGACCGCC +ATCTTTTCTGCAACTGCTCTTGGCGTCCTGGCACACAAAAGGGGTCTGCT +TGTGCGGGTCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSCAFT00000025950_canisfamiliaris.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSCAFT00000025950_canisfamiliaris.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,51 @@ +>ENSCAFT00000025950_canisfamiliaris +ATGGACCCAGAGTGCTCCCAGCTCCTCCCGGCCCTCTGTGCAGTTCTGGC +AGACCCCAGGCAGCCCGTGGCAGATGACACCTGTTTGGAGAAGCTGCTGG +ATTGGTTTAAAACGATAACCAAAGCTGGGTCCAGTCTCCTGTTATTACAG +GAGAACCCCTGTCTGGTGGAGCTGCTGTGTCACGTGCTGAAACCCCAGGA +CCTGAGTTCCAGAGTCCTCTCCTTCTCTCTCCGCCTCGCAGGGGTATTTG +CAGCCCAGGAAGATTGCTTCCAGTATCTTCAGCAGGGGGAGTTGCTGCCC +AGGCTCTTTGGGGAGCCAGGGCCCCTGGGAGGAGCTGCCTGGACTGCCCC +CTCAGTGCGCAGTGGCTGGATCCAGGGCCTGCGCTCCCTGGCACAGCATC +CTAGTGCCCTGCATTTCCTGGCTGACTGTGGTGCCGTTGACACCATCTTC +TCCCTGCAGGGAGATTCCAGCCTGTTTGTGGCCTCGGCAGCTGGGCAGCT +CCTGGTGCACATCCTGGGCTTGTCCATGCAAGGCCTAGCCGAGGGACACC +CCAGCCTGCAGGCTGGTGATTGGCCAGTGTGTGCCCAGAAGATCGTGGGT +CACATAGAAGAGTCCCTGCACTCCACAGCCGTCCCGCAGATCACACAGGC +TCTAAACGTCCTGACTACCACGTTCGGGCACTGCCATGACCCTTGGACAC +AAGTTCTGTGGGTACGGCTGAGTCCCCTAGTAGGCAGTCTACTTGAGAAA +GACCCTGTCCCAGCTGCACACTCGCTCGTGGACCTCCTCCTCAGTGTGGC +CCGTTCTCCTGGGCTGAGCTCTTCTAGCTGCGGCCTGTGGGAGACTCTGG +CTCAGACTCTGAACCATCTGAGCCCTACCCAAGCAGGGCCGCTGGCGTTA +GGGATCCTGAAACTGCAGGACTGTCCACAGGTGCTAAGGGCCCAGGCCTT +TGTCATTCTTCTCCAGCCTCTGGCCTGCGTCCTTAAAGCCACGGGTCAGG +ACCCCGGACCCTCAGGTGTGCTGGACAGTGCCACAGGTGACTCTCTGACA +GTGGACGTGCTCCTCTCCTCCAAGGCGGCCTGTGTGGGTCTCCTGTGCCG +GACTCTGGCCCACCTGGAGCTGCTGCAGCCGCTACCCCAGCGCCCCTGCC +CCTGGCCTCAGGAGCCCCTGCTTGGGGCCGCGGTGACCCTGCTGCAGTTA +TGCAGGGGCTCAGCAAGCCCTGCCTCTGACGTGGGGCGCCACCTCTGCGC +GCTCCTGCTGGGCTGCGTGCGGGTGCAGCGAGCGGCCCTGGATTTCCTGG +GGACGCTGTCTCAGGGGACAGGCCCCCAAGAGCTGGTGACGGAGGTGTTT +GCTGTCCTTCTGGAATATCTCAGGAGCCCAGACTCCAGCCCCACGGTTCT +GAAGAAAGCCTTCCAGGCCACATTCAGGTGGCTCCTGAGCTCACCCAAGA +CCCCCGGCTGCTGTGATCTAGAACCCCATGCCCTGCTGGTCCTGAGAGAG +CTGCTTCCTGTGCTGCAGAAGCGTCTGTGCAGCCCCTGCTGGGAGGTGAG +GGACTCCGGCCTCGAGTTCCTGACTCAGATGACCAGACACTGGGGAGGGC +AGGCTGGCTTCAGACATGCACTCCTCGCTTCGGAGGTGCCCAAGCTTACC +GAGCAGCTCCTACGAGACCCTGAGAGTTACGTCCGTGCCAGTGCAGTGAC +CGTCATGGGGCAGCTCTCCAGCCAGGGGCTGCATGTCACCCCTGTGAGCC +CTGAGCATCCAGGGGGCCAGCAGAAGAGTCTGCTCGTGGAGCTTCTGCAT +ATCCTCTCCACAGATTCAGAGGGATTCCCGCGGAGAGCCGTCATGCAGGT +CTTCACCCAGTGGCTGAGGGACCACCATGCCGACGTGGCGGGGGACACGG +AACAGTTTATGGCCAGGGTGCTCCAGGTCGCCAGCCAGGATCTGGACTGG +GAGGTCCGGGCCCAGGGCCTGGAGCTGGCGCTGGTATTCCTGGAGCAGAC +GCTGGGCCAGTTCCACTCCCACTGTCCCTATGCTGTGACCCCACCCGTGG +CGGCCCCAGCTGGCTCGCTGGCCCAGGCCCTGCAGCCACTATGCCGAGTG +CGGCTCTTTGAGTTTGCCTTCCGTGCCTTGTTTGACTGTGACCGACCTGT +GGCTCAGAAGTCCTGTGATCTCCTCCTCTTCCTGAGGGCCAAGACTGCTT +CTTCCTCTGGTAGCCTGGAGGAGTCCAGGAGCGGCCCAGATGTGGCCTCT +GTGGAGGCTGCCTTGCAGAGGTGGCAGGCAGGTGATCAGGGCCAGCCCCT +GGGGGACCTGGAGCCCGAGGTCGTGCTGGCTGTGCTGAGGTCTGTGGACC +TGGAAGGCCTTCGGGGTGCATTAGCCGAGGGCAGTGACCACATGGAGAAG +AGCCCTCAGTCACTCCTGCAGGACATGCTGGCCACGGTGGGCGTCCTGGG +AGAGAACGAGGCCGACTGCTACTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000026013_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000026013_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSMUST00000026013_musmusculus +ATGACGGATCTGGAGAAGCCCAGTATCACAGGCCACATGTTCGACGTAGT +CGTGATTGGAGGCGGCATCTCAGGATTGGCTGCTGCCAAACTATTGTCAG +AATACAAAATTAATGTCTTGGTTCTGGAAGCCCGGGATAGAGTTGGAGGA +AGAACATATACTGTGAGGAATGAGCATGTTAAATGGGTAGATGTTGGTGG +AGCTTATGTGGGACCAACCCAGAACAGAATCTTACGCTTGTCTAAGGAGC +TAGGCATAGAGACCTATAAAGTGAATGTCAATGAGCGTCTAGTTCAATAT +GTCAAGGGGAAAACTTACCCATTCCGTGGTGCATTTCCACCTGTGTGGAA +CCCCTTGGCATATTTGGATTACAACAACCTGTGGAGGACAATGGATGATA +TGGGAAAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGACATGCTGAG +GAATGGGACAAGATAACCATGAAAGATCTCATTGATAAAATCTGTTGGAC +AAAAACTGCTCGAGAATTTGCTTATCTTTTTGTGAACATTAATGTGACTT +CTGAGCCTCATGAGGTATCTGCCCTGTGGTTCTTGTGGTATGTGAGGCAG +TGTGGAGGTACCTCTCGGATATTCTCAGTCACCAATGGCGGCCAGGAACG +GAAATTTGTAGGTGGCTCTGGCCAAATAAGTGAACAGATAATGGTCCTCC +TTGGGGATAAAGTGAAGCTGAGCTCTCCTGTTACTTATATTGACCAAACA +GATGACAACATCATTATAGAAACACTGAATCATGAGCACTATGAGTGCAA +ATATGTAATTAGTGCCATCCCACCGGTTTTGACTGCCAAGATCCACTTTA +AACCAGAGCTTCCACCTGAGAGAAACCAATTAATTCAGCGTCTTCCAATG +GGGGCTGTCATCAAGTGCATGGTGTATTACAAGGAAGCCTTCTGGAAGAA +AAAGGACTATTGTGGCTGCATGATAATTGAAGATGAGGAGGCTCCAATTT +CAATCACTCTGGATGACACTAAACCAGATGGGTCAATGCCTGCCATCATG +GGCTTCATACTTGCCCGGAAAGCTGAACGACTTGCTAAACTACATAAAGA +CATAAGGAAGAGGAAAATCTGTGAGCTGTATGCCAAAGTTCTGGGATCTC +AAGAAGCTTTATCTCCCGTCCATTATGAAGAGAAGAACTGGTGTGAGGAG +CAGTACTCCGGGGGCTGCTACACAGCCTACTTCCCTCCTGGTATCATGAC +TCTGTATGGAAGGGTGATTCGGCAGCCAGTAGGCAGGATTTACTTTGCAG +GCACAGAGACAGCAACACAGTGGAGTGGCTACATGGAAGGTGCAGTTGAA +GCTGGAGAACGAGCAGCTAGAGAGGTCTTGAATGCTCTAGGAAAAGTTGC +CAAGAAGGATATATGGGTTCAAGAGCCTGAGTCCAAGGATGTTCCAGCTC +TTGAAATTACCCACACCTTCTTAGAGAGGAACCTGCCTTCCGTGCCTGGT +CTGCTCAAGATCACTGGTTTTTCCACTTCTGTGGCTCTTCTCTGCTTTGT +ATTGTACAAGTTTAAACAGCCCCAGTCCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000040820_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000040820_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSMUST00000040820_musmusculus +ATGAGCAACAAAAGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTAT +GGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGG +AAGCACGGGACCGTGTAGGAGGCAGGACTTACACAATTAGGAATAAAAAC +GTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACCCAGAATCG +TATCTTACGATTGGCCAAAGAGCTAGGATTGGAGACCTATAAAGTTAATG +AAGTTGAGCGGCTGATACACTTTGTAAAGGGAAAATCATATGCCTTCAGG +GGCCCATTTCCACCAGTATGGAATCCTATCACCTACCTAGATAATAACAA +CCTCTGGAGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTC +CATGGAAAGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAAGAA +TTGCTAGATAAGATCTGCTGGACCAAATCTACAAAGCAGATTGCCACGCT +CTTTGTGAACCTGTGTGTAACTGCAGAGACCCATGAGGTCTCTGCACTAT +GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGTACAACCAGAATCATCTCA +ACAACCAATGGAGGACAGGAGAGGAAATTTATTGGTGGATCTGGTCAAGT +GAGTGAACGGATAAAGGATATACTTGGGGACCGAGTGAAGCTGGAGAGGC +CTGTGATCCACATTGACCAGACAGGGGAAAATGTTATTGTGAAAACCCTA +AACCATGAAATATATGAGGCTAAATATGTGATTAGTGCCATTCCACCTGC +TTTGGGCATGAAGATTCACTATAGTCCTCCTCTGCCCATGCTAAGAAACC +AGCTGATCTCTCGTGTGCCTTTGGGTTCAGTTATTAAATGCATGGTTTAT +TACAAAGAGCCCTTCTGGAGGAAAAAGGATTTCTGTGGAACCATGGTTAT +CGAAGGAGAGGAAGCTCCAATTGCATACACATTGGATGATACCAAACCAG +ATGGCACCTATGCTGCTATAATGGGATTTATCCTTGCTCACAAAGCTAGA +AAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAGCT +ATATGCAAAAGTGCTGAACTCCCAAGAAGCTCTGCAGCCCGTCCATTATG +AAGAGAAGAACTGGTGTGAGGAACAGTATTCTGGGGGCTGCTACACAACC +TACTTCCCTCCCGGCATCTTGACCCAGTATGGAAGGGTTCTACGTCAGCC +AGTGGGCAAGATTTTCTTTGCAGGCACTGAAACAGCCTCACACTGGAGCG +GCTACATGGAGGGGGCTGTGGAGGCTGGGGAGAGAGCAGCCAGAGAGATT +CTTCATGCCATTGGGAAGATTCCAGAAGATGAAATTTGGCAGCCAGAACC +AGAATCTTTGGATGTCCCTGCACGACCCATTACCAGTACCTTCCTGGAGA +GACACCTGCCTTCTGTACCAGGCCTGCTAAAGCTGTTTGGATTGACCACC +ATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAGGGGCCTGTT +TGTACATTTTTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000041588_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000041588_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,51 @@ +>ENSMUST00000041588_musmusculus +ATGGACCCAGAATGCTCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGC +AGATCCCAGACAGCTGGTGGCAGATGACACCTGCTTGGAGAAACTGCTGG +ACTGGTTTAAAACAGTGACAGAGGCAGAGTCTAGCCTCCAACTACTACAG +GACCATCCCTGCTTAATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGA +CGTGAGCCCTAGGGTCCTCTCCTTTGCTCTGCGCCTTGTTGGGGTCTTCG +CAGCCCAGGAAGACTGTTTTGAGTACCTTCAGCAGGGAGAGTTGTTGCTG +GGGCTCTTTGGGGAGTCAGGTGCCCCCGGCTGGGCAGCCTGGAGCATCCC +AAGTGTGCGCAGCGGCTGGATCCAGGGTCTGTGCTACCTGGCACACCACC +CTAGCGCCCTGCACTTCCTGGCTGACAGTGGTGCTGTGGACACGCTCTTC +TCCTTGCAGGGAGACCCCAGCCTGTTCGTCGCCTCAGCAGCCAGCCAGCT +CCTAGTACATATCCTGGCTCTGTCCATGCAAGGTGGAGCCCCAGGGTCCC +CCGTCCCTGAAGCTGCTGCTTGGCCTATGTGTGCCCAGAAGATTGTGAAC +CATGTGGATGAGTCCCTGCATGCCAAAGCCACCCCCCAGGTCACACAGGC +CTTGAATGTCCTGACTACGACCTTCGGGCGCTGCCATAACCCCTGGACAG +GGGTCCTCTGGGAGCGGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGA +GACCCCATTCCAGCCGTGCACGCGCTCATGGACCTTCTTCTTAGTGTGGC +CAGGTCGCCTGTGTTGAATTTTGCAGCCTGTGGCCTGTGGGAGATGCTGG +CCCAGACTCTGAGCCGCCTGAGCCCCATACAAGCTGGGCCTCTAGCCCTG +GGGACCCTGAAACTTCAGCACTGTCCCCAGGAATTGAGGACCCAGGCCTT +TGGAGTCCTCCTACAGCCACTGGCCTGTATCCTGAAAGCTACCACTCAGG +CCCCTGGACCTCCAGGCTTGCTGGATGGGACTGTGGGTAGCTTGCTGACT +GTGGATATACTCTTGGCTTCAAAGTCAGCCTGTGTGGGACTCCTTTGCCA +GACTCTGGCTCACCTGGAGGAGCTGCAGATGCTGCCCCAGTGCCCCTCAC +CCTGGCCACAGGTGCATCTGCTGCAAGCTGCTTTGACTATATTGCATCTC +TGTGATGGCTCAGCGGACCCCAGCTCCAGTGCAGGAGGCCGTCTCTGTGG +GACTCTGGGTGGCTGTGTTCGTGTCCAGCGAGCAGCCCTTGACTTCTTGG +GGACCCTGTCTCAGGGGACAAGCCCCCTGGAGTTGGTTCTGGAGGTATTT +GCTGTTCTCCTGAAGACCCTGGAGAGCCCAGAGTCCAGCCCCATGGTCCT +AAAGAAGGCCTTCCAGGCCACACTCAGATGGCTCCAGAACCCACACAAGA +CCCCCAGCAGCTCTGATCTCAGCTCCGACGCCCTGCTGTTTCTCGGAGAG +CTGTTCCCCATACTACAGAAGCGCCTATGCAGCCCATGTTGGGAGGTGAG +GGACTCTGCCCTGGAGTTCCTGACGCATCTGATCCGACACTGGGGAGGGC +AGGCTGACTTCAGAGAGGCACTGCGTTCCTCAGAAGTACCCACACTTGCC +CTCCAGCTTCTCCAAGACCCAGAGAGTTACGTCCGAGCAAGTGCCGTGGG +TGCCGCTGGGCAGCTCTCCAGCCAGGGTCTGCAGGCCGCTCCCGCTAGCC +CCGAGAACTCGCAGGCCCAACAGGGCCTACTCATGGACCTTATGCATATC +CTGTCCACTGACTCAGAGGGCTTCCCTCGAAGGGCTGTGTTACGGGTCTT +CACGGACTGGCTGAGGGATGGCCATGCTGACGTGGTTCGAGACACGGAGT +GGTTCGTGGCCACTGTTCTCCAGGCAGTGAGCCGGGATCTGGACTGGGAG +GTCCGAGTGCAGGGTTTGGAGCTGGCACGGGTGTTCCTCACCCAGGCACT +GGGCCAGCCCAGCCTCCACTGTCCCTATACAGTGGGCCTGCCCAGGGCCT +CCTCTCCCCGCCCACACCCGGAATTCTTGCAGACTCTCTGCCGTCTGCCG +CTCTTTGAGTTTGCCTTTTGTGCCTTGCTTGACTGTGACCGACCGGTGGC +CCAAAAGGCCTGTGACCTGCTCCTCTTCTTGAGGGACAAGACAGTTCCCT +GCAGTAGCCCTCGGGAGGCAGGGGACAGCCCCAACTCAGCCTCAGTGGAG +GCTGCCCTGCAGAGGTGGCGGGAAGGAGAGCAGGCCCAGCCCCTAGGGGA +CCTGGATCCTGAGGCCATGCTAGCCATCCTCAGGGCCTTAGACCTGGAGG +GCCTGCAGGGCAGGCTGGCCAAGAGCAGCGACCATGTGGAGAAGAGCCCA +CAGTCCCTGCTGCAGGACATGCTGGCCACGGTGGGTGTGTTGGAGGAGAA +CGAAGCTGACTGCTACTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000091291_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000091291_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,84 @@ +>ENSMUST00000091291_musmusculus +ATGGGCTTCGGGAGAGGATGTGAGACGACGGCTGTGCCATTGCTGGTGGC +CGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTGGAGAGG +TGTGCCCTGGTATGGACATCCGGAACAACCTGACCAGGCTACATGAGCTG +GAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCCTGATGTTCAA +GACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGA +TCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGAAAGTCTGAAA +GACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTCTCTTCTTCAA +CTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAGCTGGGGCTTT +ATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGAGAAGAATAAT +GAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCCTGGATTCTGT +GGAGGACAACTACATTGTACTGAACAAAGATGACAACGAGGAATGTGGGG +ATGTCTGTCCAGGCACCGCCAAGGGCAAGACCAACTGTCCTGCCACTGTC +ATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACAGTCATTGTCAGAA +AGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACAGCTGAAGGCCTGT +GCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACCTGATGACCCCACC +AAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTCAGTGTGTGGAGAC +CTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGCTGTGTGAACTTCA +GCTTCTGCCAAGACCTTCACTTCAAATGCAGGAACTCTCGGAAGCCTGGC +TGCCACCAATACGTCATTCACAACAATAAGTGCATCCCCGAGTGCCCGTC +TGGCTATACCATGAATTCCAGCAACTTGATGTGCACCCCATGTCTGGGAC +CCTGCCCTAAGGTCTGCCAAATCCTCGAAGGTGAGAAGACCATTGATTCT +GTGACATCTGCCCAGGAGCTCCGAGGCTGCACTGTGATCAACGGTAGCCT +GATCATCAACATCCGAGGGGGCAACAACCTGGCAGCTGAGCTGGAGGCTA +ACCTTGGCCTCATTGAAGAAATTTCGGGATTTCTAAAGATCCGCCGCTCC +TATGCTCTGGTATCACTTTCTTTCTTCAGGAAGCTACATCTGATTCGAGG +AGAGACCTTGGAAATTGGGAACTATTCTTTTTATGCCTTGGACAACCAGA +ACCTGAGGCAACTCTGGGACTGGAGCAAACACAACCTCACCATCACTCAG +GGCAAGCTCTTCTTCCATTACAACCCGAAACTCTGCTTGTCTGAAATTCA +CAAGATGGAAGAAGTCTCCGGAACTAAGGGCCGTCAGGAGAGGAACGACA +TTGCCCTGAAGACCAATGGGGACCAGGCATCGTGTGAAAATGAATTGCTT +AAATTTTCTTTCATTCGGACATCTTTTGACAAGATCCTGTTGAGGTGGGA +ACCCTACTGGCCCCCCGACTTCCGAGATCTCCTGGGATTCATGTTGTTCT +ACAAAGAGGCCCCTTATCAGAATGTGACAGAGTTTGATGGGCAGGATGCT +TGTGGCTCCAACAGCTGGACTGTGGTGGATATTGACCCGCCCCAGAGGTC +CAACGACCCCAAGTCTCAGACCCCAAGCCACCCTGGGTGGCTGATGCGGG +GCCTCAAACCCTGGACCCAATACGCCATCTTTGTGAAGACCTTGGTTACC +TTCTCTGATGAACGGCGGACCTATGGAGCCAAAAGTGATATCATCTATGT +GCAAACAGATGCCACTAATCCTTCTGTCCCCCTGGATCCCATATCAGTTT +CTAATTCCTCATCTCAGATTATCTTAAAGTGGAAGCCCCCCTCTGACCCC +AATGGCAACATCACACACTACCTGGTGTACTGGGAGAGGCAAGCAGAGGA +CAGCGAGCTGTTTGAGCTGGATTATTGTCTCAAAGGGCTGAAGCTCCCTT +CACGGACCTGGTCCCCACCCTTTGAGTCTGATGATTCTCAGAAGCACAAT +CAGAGTGAGTATGACGACTCGGCCAGTGAGTGCTGCTCATGCCCTAAGAC +TGACTCTCAGATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCT +TCGAGGATTACCTGCACAACGTGGTTTTTGTCCCCAGGCCATCCCGAAAG +CGAAGATCCCTTGAAGAGGTGGGGAATGTGACAGCCACCACACTCACACT +TCCAGATTTCCCCAACGTCTCCTCTACCATTGTGCCCACAAGTCAGGAGG +AGCACAGGCCATTTGAGAAAGTGGTGAACAAGGAGTCACTTGTCATCTCT +GGCCTGAGACACTTCACTGGGTACCGCATTGAGCTGCAGGCATGCAATCA +AGATTCCCCAGATGAGAGGTGCAGTGTGGCTGCCTACGTCAGTGCCCGGA +CCATGCCTGAAGCTAAGGCAGATGACATCGTTGGCCCTGTGACTCATGAA +ATCTTTGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAAGGAACC +TAATGGTCTGATTGTGCTATATGAAGTGAGCTATCGCCGATATGGTGATG +AGGAGCTGCACCTCTGTGTCTCCCGGAAGCATTTTGCCCTGGAGCGGGGC +TGCAGGCTGCGAGGGCTCTCCCCAGGAAACTACAGTGTTCGAGTCCGGGC +TACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCCACCTATTTTTATG +TGACTGATTATTTAGATGTCCCATCAAATATTGCCAAAATTATCATTGGA +CCCCTCATCTTTGTCTTCCTCTTCAGTGTTGTGATTGGAAGTATTTATCT +ATTTCTGAGAAAGAGGCAGCCGGATGGGCCAATGGGACCACTGTATGCAT +CTTCAAACCCTGAGTACCTCAGTGCCAGTGATGTGTTTCCATCTTCTGTG +TACGTGCCGGACGAGTGGGAGGTGCCTCGAGAGAAGATCACCCTTCTTCG +AGAGCTGGGGCAGGGATCCTTTGGTATGGTGTATGAAGGCAATGCCAAGG +ATATCATCAAGGGTGAGGCAGAGACCCGTGTTGCGGTTAAGACTGTCAAT +GAGTCAGCCAGTCTTCGAGAACGGATCGAGTTCCTCAATGAGGCATCAGT +CATGAAGGGATTCACCTGCCATCATGTGGTCCGCCTTCTTGGGGTGGTAT +CCAAAGGACAGCCAACGCTGGTAGTGATGGAATTGATGGCTCATGGAGAC +CTGAAAAGTCACCTCCGTTCTCTGAGGCCAGATGCTGAGAATAACCCAGG +CCGCCCTCCCCCTACCTTGCAAGAAATGATTCAGATGACAGCAGAAATTG +CTGATGGCATGGCATACTTGAACGCCAAGAAGTTTGTGCACCGGGACCTG +GCAGCTCGAAACTGCATGGTTGCCCATGATTTTACTGTCAAAATTGGAGA +CTTTGGAATGACAAGGGACATCTACGAGACAGATTACTATCGGAAAGGGG +GCAAGGGACTGCTTCCTGTGAGGTGGATGTCACCTGAGTCCCTGAAGGAT +GGAGTCTTTACTGCTTCTTCTGATATGTGGTCCTTTGGGGTGGTCCTTTG +GGAAATCACTAGCCTGGCTGAGCAACCTTATCAAGGCCTGTCTAATGAAC +AGGTGTTGAAGTTTGTCATGGATGGAGGCTATCTGGATCCCCCTGATAAC +TGTCCAGAGAGACTCACTGACCTGATGCGCATGTGCTGGCAGTTCAACCC +CAAGATGAGGCCAACCTTCCTGGAAATCGTCAACCTGCTCAAGGATGACC +TCCACCCCAGCTTTCCAGAAGTTTCCTTCTTCTACAGCGAGGAGAACAAG +GCTCCTGAGAGTGAGGAGCTGGAGATGGAGTTTGAAGACATGGAGAATGT +CCCGTTGGATCGTTCCTCTCACTGTCAGAGAGAAGAGGCTGGGGGCCGGG +AGGGAGGGTCCTCACTGAGCATCAAACGGACCTATGATGAACACATCCCC +TATACCCACATGAATGGGGGCAAGAAGAACGGACGTGTCCTTACCCTGCC +AAGGTCAAACCCTTCCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000100505_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000100505_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,54 @@ +>ENSMUST00000100505_musmusculus +ATGGTGCATTTTGCACTCTCGGGCCTAATTCCCGTAGCGGAGGGATGCGG +GGGCGGGATTAGAACCCCTAGGCTAACTCGCAGTCGCCGAGAGCGCACCT +CTTACCCGGATTTGGGAGGAACTGCCTGCCTGATCATGGACCCAGAATGC +TCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGCAGATCCCAGACAGCT +GGTGGCAGATGACACCTGCTTGGAGAAACTGCTGGACTGGTTTAAAACAG +TGACAGAGGCAGAGTCTAGCCTCCAACTACTACAGGACCATCCCTGCTTA +ATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGACGTGAGCCCTAGGGT +CCTCTCCTTTGCTCTGCGCCTTGTTGGGGTCTTCGCAGCCCAGGAAGACT +GTTTTGAGTACCTTCAGCAGGGAGAGTTGTTGCTGGGGCTCTTTGGGGAG +TCAGGTGCCCCCGGCTGGGCAGCCTGGAGCATCCCAAGTGTGCGCAGCGG +CTGGATCCAGGGTCTGTGCTACCTGGCACACCACCCTAGCGCCCTGCACT +TCCTGGCTGACAGTGGTGCTGTGGACACGCTCTTCTCCTTGCAGGGAGAC +CCCAGCCTGTTCGTCGCCTCAGCAGCCAGCCAGCTCCTAGTACATATCCT +GGCTCTGTCCATGCAAGGTGGAGCCCCAGGGTCCCCCGTCCCTGAAGCTG +CTGCTTGGCCTATGTGTGCCCAGAAGATTGTGAACCATGTGGATGAGTCC +CTGCATGCCAAAGCCACCCCCCAGGTCACACAGGCCTTGAATGTCCTGAC +TACGACCTTCGGGCGCTGCCATAACCCCTGGACAGGGGTCCTCTGGGAGC +GGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGAGACCCCATTCCAGCC +GTGCACGCGCTCATGGACCTTCTTCTTAGTGTGGCCAGGTCGCCTGTGTT +GAATTTTGCAGCCTGTGGCCTGTGGGAGATGCTGGCCCAGACTCTGAGCC +GCCTGAGCCCCATACAAGCTGGGCCTCTAGCCCTGGGGACCCTGAAACTT +CAGCACTGTCCCCAGGAATTGAGGACCCAGGCCTTTGGAGTCCTCCTACA +GCCACTGGCCTGTATCCTGAAAGCTACCACTCAGGCCCCTGGACCTCCAG +GCTTGCTGGATGGGACTGTGGGTAGCTTGCTGACTGTGGATATACTCTTG +GCTTCAAAGTCAGCCTGTGTGGGACTCCTTTGCCAGACTCTGGCTCACCT +GGAGGAGCTGCAGATGCTGCCCCAGTGCCCCTCACCCTGGCCACAGGTGC +ATCTGCTGCAAGCTGCTTTGACTATATTGCATCTCTGTGATGGCTCAGCG +GACCCCAGCTCCAGTGCAGGAGGCCGTCTCTGTGGGACTCTGGGTGGCTG +TGTTCGTGTCCAGCGAGCAGCCCTTGACTTCTTGGGGACCCTGTCTCAGG +GGACAAGCCCCCTGGAGTTGGTTCTGGAGGTATTTGCTGTTCTCCTGAAG +ACCCTGGAGAGCCCAGAGTCCAGCCCCATGGTCCTAAAGAAGGCCTTCCA +GGCCACACTCAGATGGCTCCAGAACCCACACAAGACCCCCAGCAGCTCTG +ATCTCAGCTCCGACGCCCTGCTGTTTCTCGGAGAGCTGTTCCCCATACTA +CAGAAGCGCCTATGCAGCCCATGTTGGGAGGTGAGGGACTCTGCCCTGGA +GTTCCTGACGCATCTGATCCGACACTGGGGAGGGCAGGCTGACTTCAGAG +AGGCACTGCGTTCCTCAGAAGTACCCACACTTGCCCTCCAGCTTCTCCAA +GACCCAGAGAGTTACGTCCGAGCAAGTGCCGTGGGTGCCGCTGGGCAGCT +CTCCAGCCAGGGTCTGCAGGCCGCTCCCGCTAGCCCCGAGAACTCGCAGG +CCCAACAGGGCCTACTCATGGACCTTATGCATATCCTGTCCACTGACTCA +GAGGGCTTCCCTCGAAGGGCTGTGTTACGGGTCTTCACGGACTGGCTGAG +GGATGGCCATGCTGACGTGGTTCGAGACACGGAGTGGTTCGTGGCCACTG +TTCTCCAGGCAGTGAGCCGGGATCTGGACTGGGAGGTCCGAGTGCAGGGT +TTGGAGCTGGCACGGGTGTTCCTCACCCAGGCACTGGGCCAGCCCAGCCT +CCACTGTCCCTATACAGTGGGCCTGCCCAGGGCCTCCTCTCCCCGCCCAC +ACCCGGAATTCTTGCAGACTCTCTGCCGTCTGCCGCTCTTTGAGTTTGCC +TTTTGTGCCTTGCTTGACTGTGACCGACCGGTGGCCCAAAAGGCCTGTGA +CCTGCTCCTCTTCTTGAGGGACAAGACAGTTCCCTGCAGTAGCCCTCGGG +AGGCAGGGGACAGCCCCAACTCAGCCTCAGTGGAGGCTGCCCTGCAGAGG +TGGCGGGAAGGAGAGCAGGCCCAGCCCCTAGGGGACCTGGATCCTGAGGC +CATGCTAGCCATCCTCAGGGCCTTAGACCTGGAGGGCCTGCAGGGCAGGC +TGGCCAAGAGCAGCGACCATGTGGAGAAGAGCCCACAGTCCCTGCTGCAG +GACATGCTGGCCACGGTGGGTGTGTTGGAGGAGAACGAAGCTGACTGCTA +CTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000110806_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000110806_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,37 @@ +>ENSMUST00000110806_musmusculus +ATGGACCCAGAATGCTCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGC +AGATCCCAGACAGCTGGTGGCAGATGACACCTGCTTGGAGAAACTGCTGG +ACTGGTTTAAAACAGTGACAGAGGCAGAGTCTAGCCTCCAACTACTACAG +GACCATCCCTGCTTAATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGA +CGTGAGCCCTAGGGTCCTCTCCTTTGCTCTGCGCCTTGTTGGGGTCTTCG +CAGCCCAGGAAGACTGTTTTGAGTACCTTCAGCAGGGAGAGTTGTTGCTG +GGGCTCTTTGGGGAGTCAGGTGCCCCCGGCTGGGCAGCCTGGAGCATCCC +AAGTGTGCGCAGCGGCTGGATCCAGGGTCTGTGCTACCTGGCACACCACC +CTAGCGCCCTGCACTTCCTGGCTGACAGTGGTGCTGTGGACACGCTCTTC +TCCTTGCAGGGAGACCCCAGCCTGTTCGTCGCCTCAGCAGCCAGCCAGCT +CCTAGTACATATCCTGGCTCTGTCCATGCAAGGTGGAGCCCCAGGGTCCC +CCGTCCCTGAAGCTGCTGCTTGGCCTATGTGTGCCCAGAAGATTGTGAAC +CATGTGGATGAGTCCCTGCATGCCAAAGCCACCCCCCAGGTCACACAGGC +CTTGAATGTCCTGACTACGACCTTCGGGCGCTGCCATAACCCCTGGACAG +GGGTCCTCTGGGAGCGGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGA +GACCCCATTCCAGCCGTGCACGCGCTCATGGACCTTCTTCTTAGTGTGGC +CAGGTCGCCTGTGTTGAATTTTGCAGCCTGTGGCCTGTGGGAGATGCTGG +CCCAGACTCTGAGCCGCCTGAGCCCCATACAAGCTGGGCCTCTAGCCCTG +GGGACCCTGAAACTTCAGCACTGTCCCCAGGAATTGAGGACCCAGGCCTT +TGGAGTCCTCCTACAGCCACTGGCCTGTATCCTGAAAGCTACCACTCAGG +CCCCTGGACCTCCAGGCTTGCTGGATGGGACTGTGGGTAGCTTGCTGACT +GTGGATATACTCTTGGCTTCAAAGTCAGCCTGTGTGGGACTCCTTTGCCA +GACTCTGGCTCACCTGGAGGAGCTGCAGATGCTGCCCCAGTGCCCCTCAC +CCTGGCCACAGGTGCATCTGCTGCAAGCTGCTTTGACTATATTGCATCTC +TGTGATGGCTCAGCGGACCCCAGCTCCAGTGCAGGAGGCCGTCTCTGTGG +GACTCTGGGTGGCTGTGTTCGTGTCCAGCGAGCAGCCCTTGACTTCTTGG +GGACCCTGTCTCAGGGGACAAGCCCCCTGGAGTTGGTTCTGGAGGTATTT +GCTGTTCTCCTGAAGACCCTGGAGAGCCCAGAGTCCAGCCCCATGGTCCT +AAAGAAGGCCTTCCAGGCCACACTCAGATGGCTCCAGAACCCACACAAGA +CCCCCAGCAGCTCTGATCTCAGCTCCGACGCCCTGCTGTTTCTCGGAGAG +CTGTTCCCCATACTACAGAAGCGCCTATGCAGCCCATGTTGGGAGGTGAG +GGACTCTGCCCTGGAGTTCCTGACGCATCTGATCCGACACTGGGGAGGGC +AGGCTGACTTCAGAGAGGCACTGCGTTCCTCAGAAGTACCCACACTTGCC +CTCCAGCTTCTCCAAGACCCAGAGAGTTACGTCCGAGCAAGTGCCGTGGG +TGCCGCTGGGCAGCTCTCCAGCCAGGGTCTGCAGGCCGCTCCCGCTAGCC +CCGAGAACTCGCAGGCCCAACAGGTAGACACAGGGAGTTGGTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000153440_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000153440_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,20 @@ +>ENSMUST00000153440_musmusculus +ATGGACCCAGAATGCTCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGC +AGATCCCAGACAGCTGGTGGCAGATGACACCTGCTTGGAGAAACTGCTGG +ACTGGTTTAAAACAGTGACAGAGGCAGAGTCTAGCCTCCAACTACTACAG +GACCATCCCTGCTTAATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGA +CGTGAGCCCTAGGGTCCTCTCCTTTGCTCTGCGCCTTGTTGGGGTCTTCG +CAGCCCAGGAAGACTGTTTTGAGTACCTTCAGCAGGGAGAGTTGTTGCTG +GGGCTCTTTGGGGAGTCAGGTGCCCCCGGCTGGGCAGCCTGGAGCATCCC +AAGTGTGCGCAGCGGCTGGATCCAGGGTCTGTGCTACCTGGCACACCACC +CTAGCGCCCTGCACTTCCTGGCTGACAGTGGTGCTGTGGACACGCTCTTC +TCCTTGCAGGGAGACCCCAGCCTGTTCGTCGCCTCAGCAGCCAGCCAGCT +CCTAGTACATATCCTGGCTCTGTCCATGCAAGGTGGAGCCCCAGGGTCCC +CCGTCCCTGAAGCTGCTGCTTGGCCTATGTGTGCCCAGAAGATTGTGAAC +CATGTGGATGAGTCCCTGCATGCCAAAGCCACCCCCCAGGTCACACAGGC +CTTGAATGTCCTGACTACGACCTTCGGGCGCTGCCATAACCCCTGGACAG +GGGTCCTCTGGGAGCGGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGA +GACCCCATTCCAGCCGTGCACGCGCTCATGGACCTTCTTCTTAGTGTGGC +CAGGTCGCCTGTGTTGAATTTTGCAGCCTGTGGCCTGTGGGAGATGCTGG +CCCAGACTCTGAGCCGCCTGAGCCCCATACAAGCTGGGCCTCTAGCCCTG +GGGACCCTGAAACTTCAGCACTGGCTTGCTGGATGGGACTGTGGGTAG |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000163344_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000163344_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,8 @@ +>ENSMUST00000163344_musmusculus +ATGAGCAACAAAAGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTAT +GGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGG +AAGCACGGGACCGTGTAGGAGGCAGGACTTACACAATTAGGAATAAAAAC +GTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACCCAGAATCG +TATCTTACGATTGGCCAAAGAGCTAGGATTGGAGACCTATAAAGTTAATG +AAGTTGAGCGGCTGATACACTTTGTAAAGATCTACAAAGCAGATTGCCAC +GCTCTTTGTGAACCTGTGTGTAACTGCAGAGACCCATGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000168613_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000168613_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,14 @@ +>ENSMUST00000168613_musmusculus +ATGAGCAACAAAAGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTAT +GGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGG +AAGCACGGGACCGTGTAGGAGGCAGGACTTACACAATTAGGAATAAAAAC +GTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACCCAGAATCG +TATCTTACGATTGGCCAAAGAGCTAGGATTGGAGACCTATAAAGTTAATG +AAGTTGAGCGGCTGATACACTTTGTAAAGGGAAAATCATATGCCTTCAGG +GGCCCATTTCCACCAGTATGGAATCCTATCACCTACCTAGATAATAACAA +CCTCTGGAGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTC +CATGGAAAGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAAGAA +TTGCTAGATAAGATCTGCTGGACCAAATCTACAAAGCAGATTGCCACGCT +CTTTGTGAACCTGTGTGTAACTGCAGAGACCCATGAGGTCTCTGCACTAT +GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGTACAACCAGAATCATCTCA +ACAACCAATGGAGGACAGGGGAAAATGTTATTGTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000173143_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000173143_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,4 @@ +>ENSMUST00000173143_musmusculus +ATGAGCAACAAAAGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGAAAA +ACCTGCTAATTCTAGTCAGTTTACAAGCTCATTGTGGAGGAGAATTGAAA +AACTGTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000207100_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000207100_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,15 @@ +>ENSMUST00000207100_musmusculus +AGGTCCAACGACCCCAAGTCTCAGACCCCAAGCCACCCTGGGTGGCTGAT +GCGGGGCCTCAAACCCTGGACCCAATACGCCATCTTTGTGAAGACCTTGG +TTACCTTCTCTGATGAACGGCGGACCTATGGAGCCAAAAGTGATATCATC +TATGTGCAAACAGATGCCACTAATCCTTCTGTCCCCCTGGATCCCATATC +AGTTTCTAATTCCTCATCTCAGATTATCTTAAAGTGGAAGCCCCCCTCTG +ACCCCAATGGCAACATCACACACTACCTGGTGTACTGGGAGAGGCAAGCA +GAGGACAGCGAGCTGTTTGAGCTGGATTATTGTCTCAAAGGGCTGAAGCT +CCCTTCACGGACCTGGTCCCCACCCTTTGAGTCTGATGATTCTCAGAAGC +ACAATCAGAGTGAGTATGACGACTCGGCCAGTGAGTGCTGCTCATGCCCT +AAGACTGACTCTCAGATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAA +GACCTTCGAGGATTACCTGCACAACGTGGTTTTTGTCCCCAGAAAAACCT +CTTCAGGCAATGGTGCCGAGGACAGTAGGCCATCCCGAAAGCGAAGATCC +CTTGAAGAGGTGGGGAATGTGACAGCCACCACACTCACACTTCCAGATTT +CCCCAACGTCTCCTCTACCATT |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSMUST00000208839_musmusculus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSMUST00000208839_musmusculus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,7 @@ +>ENSMUST00000208839_musmusculus +NAGACAGATTACTATCGGAAAGGGGGCAAGGGACTGCTTCCTGTGAGGTG +GATGTCACCTGAGTCCCTGAAGGATGGAGTCTTTACTGCTTCTTCTGATA +TGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACTAGCCTGGCTGAGCAA +CCTTATCAAGGCCTGTCTAATGAACAGGTGTTGAAGTTTGTCATGGATGG +AGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTGAGATATGAGA +TAAAGACACACTGGCCACCCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSPTRT00000019089_pantroglodytes.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSPTRT00000019089_pantroglodytes.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,84 @@ +>ENSPTRT00000019089_pantroglodytes +ATAGGCACCGGGGGCCGGCGGGGGGCGGCGGCCGCGCCGCTGCTGGTGGC +GGTGGCCGCGCTTCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGAGG +TGTGTCCCGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTG +GAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAA +AACGAGGCCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATAATGA +TCACTGATTACTTGCTGCTCTTCCGGGTCTATGGGCTCGAGAGCCTGAAG +GACCTGTTCCCCAACCTCACGGTCATCCGGGGGTCACGACTGTTCTTTAA +CTACGCGCTGGTCATCTTCGAGATGGTTCACCTCAAGGAACTCGGCCTCT +ACAACCTGATGAACATCACCCGGGGTTCTGTCCGCATCGAGAAGAACAAT +GAGCTCTGTTACTTGGCCACTATCGACTGGTCCCGTATCCTGGATTCCGT +GGAGGATAATTACATCGTGTTGAACAAAGATGACAACGAGGAGTGTGGAG +ACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTC +ATCAACGGGCAGTTTGTCGAACGATGTTGGACTCACAGTCACTGCCAGAA +AGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCT +GTTGCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACC +AAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGAC +CTGCCCGCCCCCGTACTACCACTTCCAGGACTGGCGCTGTGTGAACTTCA +GCTTCTGCCAGGACCTGCACCACAAATGCAAGAACTCGCGGAGGCAGGGC +TGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTC +CGGGTACACGATGAATTCCAGCAACTTGCTGTGCACCCCATGCCTGGGTC +CCTGTCCCAAGGTGTGCCACCTCCTAGAAGGCGAGAAGACCATCGACTCG +GTGACGTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCT +GATCATCAACATTCGAGGAGGCAACAATCTGGCAGCTGAGCTAGAAGCCA +ACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGATCC +TACGCTCTGGTGTCACTTTCCTTCTTCCGGAAGTTACGTCTGATTCGAGG +AGAGACCTTGGAAATCGGGAACTACTCCTTCTATGCCTTGGACAACCAGA +ACCTAAGGCAGCTCTGGGATTGGAGCAAACACAACCTCACCATCACTCAG +GGGAAACTCTTCTTCCACTATAACCCCAAACTCTGCTTGTCAGAAATCCA +CAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACA +TTGCCCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAATGAGTTACTT +AAATTTTCTTACATTCGGACATCTTTTGACAAGATCTTGCTGAGATGGGA +GCCGTACTGGCCCCCCGACTTCCGAGACCTCTTGGGGTTCATGCTGTTCT +ACAAAGAGGCCCCTTATCAAAATGTGACGGAGTTCGACGGGCAGGATGCA +TGTGGTTCCAACAGTTGGACGGTGGTAGACATTGACCCACCCCTGAGGTC +CAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTGA +AGCCCTGGACCCAGTATGCCATCTTCGTGAAGACCCTGGTCACCTTTTCG +GATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGAC +AGATGCCACCAACCCCTCCGTGCCCCTGGATCCAATCTCAGTGTCTAACT +CATCATCCCAGATTATTTTGAAGTGGAAACCCCCCTCCGACCCCAATGGC +AACATCACCCACTACCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA +GCTGTTCGAACTGGATTATTGCCTCAAATGGTGTGTGTGGTGTGTGTGTG +TGGTTGTTTGTTTGTGGAGTGTGTGTGAGTATGAGGATTCGGCCGGCGAA +TGCTGCTCCTGTCCAAAGACAGACTCTCAGATCCTGAAGGAGCTGGAGGA +GTCCTCGTTTAGGAAGACGTTTGAGGATTACCTGCACAACGTGGTTTTCG +TCCCCAGAAAAACCTCTTCAGGCACTGGTGCCGAGGACCCTAGGCCATCT +CGGAAACGCAGGTCCCTTGGCGATGTTGGGAATGTGACGGTGGCCGTGCC +CACGGTGGCAGCTTTCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTC +CGGAGGAGCACAGGCCTTTTGAGAAGGTGGTGAACAAGGAGTCGCTGGTC +ATCTCCGGCTTGCGACACTTCACGGGCTATCGCATCGAGCTGCAGGCTTG +CAACCAGGACACCCCTGAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTG +CCAGGACCATGCCTGAAGCCAAGGCTGATGACATTGTCGGCCCTGTGACG +CATGAAATCTTTGAGAACAACGTTGTCCACTTGATGTGGCAGGAGCCGAA +GGAGCCCAATGGTCTGATCGTGCTGTATGAAGTGAGTTATCGGCGATATG +GTGATGAGGAGCTGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAG +CGGGGCTGCAGGCTGCGTGGGCTGTCACCGGGGAACTACAGCGTGCGAGT +CCGGGCCACCTCCCTTGCGGGCAACGGCTCTTGGACGGAACCCACCTATT +TCTACGTGACAGACTATTTAGATGTCCCGTCAAATATTGCAAAAATTATC +ATCGGCCCCCTCATCTTTGTCTTTCTCTTCAGTGTTGTGATTGGAAGTAT +TTATCTATTCCTGAGAAAGAGGCAGCCAGATGGGCCGCTGGGACCGCTTT +ACGCTTCTTCAAACCCTGAGTATCTCAGTGCCAGTGATGTGTTTCCATGC +TCTGTGTACGTGCCGGACGAGTGGGAGGTGCCTCGAGAGAAGATCACCCT +CCTTCGAGAGCTGGGGCAGGGCTCCTTCGGCATGGTGTATGAGGGCAATG +CCAGGGACATCATCAAGGGTGAGGCAGAGACCCGCGTGGCGGTGAAGACG +GTCAACGAGTCAGCCAGTCTCCGAGAGCGGATTGAGTTCCTCAATGAGGC +CTCGGTCATGAAGGGCTTCACCTGCCATCATGTGGTGCGCCTCCTGGGAG +TGGTGTCCAAGGGCCAGCCCACACTGGTGGTGATGGAGCTGATGGCTCAC +GGAGACCTGAAGAGCTACCTCCGTTCTCTGCGGCCAGAGGCTGAGAATAA +TCCCGGCCGCCCTCCCCCTACCCTTCAAGAGATGATTCAGATGGCGGCAG +AGATTGCTGATGGGATGGCCTACCTGAACGCCAAGAAGTTTGTGCATCGG +GACCTGGCAGCGAGAAACTGCATGGTCGCCCATGATTTTACTGTCAAAAT +TGGAGACTTTGGAATGACCAGAGACATCTATGAAACGGATTACTACCGGA +AAGGGGGCAAGGGTCTGCTCCCTGTACGGTGGATGGCGCCAGAGTCCCTG +AAGGATGGGGTCTTCACCACTTCTTCTGACATGTGGTCCTTTGGCGTGGT +CCTTTGGGAAATCACCAGCTTGGCAGAACAGCCTTACCAAGGCCTGTCTA +ATGAACAGGTGTTGAAATTTGTCATGGATGGAGGGTATCTGGATCAACCC +GACAACTGTCCAGAGAGAGTCACTGACCTCATGCGCATGTGCTGGCAATT +CAACCCCAAGATGAGGCCAACCTTCCTGGAGATTGTCAACCTGCTCAAGG +ACGACCTGCACCCCAGCTTTCCGGAGGTGTCGTTCTTCCACAGCGAGGAG +AACAAGGCTCCCGAGAGCGAGGAGCTGGAGATGGAGTTTGAGGACATGGA +GAATGTGCCCCTGGACCGTTCCTCGCACTGTCAGAGGGAGGAGGCGGGGG +GCCGGGATGGAGGGTCCTCACTAGGTTTCAAGCGGAGCTACGAGGAACAC +ATCCCTTACACACACATGAACGGAGGCAAGAAAAACGGGCGGATTCTGAC +CTTGCCTCGGTCCAATCCTTCCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSPTRT00000034846_pantroglodytes.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSPTRT00000034846_pantroglodytes.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,51 @@ +>ENSPTRT00000034846_pantroglodytes +ATGGACCCGGAATGCGCCCAGCTGCTCCCGGCTCTCTGTGCTGTTCTGGT +AGATCCCAGGCAGCCGGTGGCAGATGACACCTGTTTGGAGAAGCTCCTGG +ACTGGTTTAAAACGGTCACTGAAGGAGAGTCCAGTGTCGTGCTGCTGCAG +GAGCACCCCTGCCTGGTGGAGCTGCTGTCCCATGTGCTGAAAGTCCAGGA +CCTGAGTTCTGGGGTCCTCTCCTTCTCACTCCGCCTGGCAGGAACCTTCG +CAGCCCAGGAAAACTGCTTCCAGTATCTTCAGCAGGGGGAGTTACTACCA +GGGCTCTTTGGGGAGGCAGGACCCCTCGGCCGAGCAGCCTGGGCCGTCCC +CACCGTGCGCAGCGGCTGGATCCAGGGCCTGCGCTCCCTGGCACAGCACC +CCAGCGCCCTGCGCTTCCTGGCCGACCACGGTGCGGTCGACACCATCTTC +TCCCTTCAGGGAGACTCCAGCCTGTTTGTGGCCTCGGCGGCCAGTCAGCT +CCTGGTACACGTCCTGGCTTTGTCCATGCAAGGTGGAGCCGAGGGACAGC +CCTGCCTGCCGGGGGGTGACTGGCCCGCGTGTGCCCAGAGGATCATGGAT +CACGTTGAAGAGTCCTTGTGCTCCGCGGCCACCCCCAAGGTCACTCAGGC +CCTGAACGTCCTGACCACAACCTTCGGGCGCTGCCAGAGCCCCTGGACGG +AAGCCCTGTGGGTGCGGCTGAGTCCCCGCGTGGCGTGTCTGCTGGAGAGA +GACCCCATCCCCGCCGCACACTCGTTCGTGGACCTGCTTCTCTGTGTGGC +TCGTTCTCCCGTGTTCAGTTCTTCCGACGGCAGCCTGTGGGAGACAGTGG +CGCGGGCTCTGAGCTGCCTGGGTCCCACCCACATGGGACCCCTGGCTTTG +GGGATCCTGAAGCTCGAGCACTGTCCACAGGCACTGAGGACCCAGGCCTT +CCAGGTCCTTCTCCAGCCCCTGGCCTGTGTCCTGAAGGCCACGGTTCAGG +CCCCCGGACCCCCAGGCTTGCTGGACGGGACGGCAGACGATGCCACGACG +GTGGACACACTCCTGGCCTCCAAGTCGTCCTGCGCGGGCCTCCTGTGCCG +CACCCTGGCTCACCTGGAGGAGCTGCAGCCGCTGCCCCAGCGCCCTTCAC +CGTGGCCCCAGGCGTCTCTACTGGGGGCTACAGTGACTGTCCTGCGGCTC +TGTGACGGCTCAGCTGCCCCTGCCTCCAGTGTGGGGGGCCACCTCTGTGG +GACCCTGGCGGGCTGCGTCCGGGTCCAGCGAGCAGCCCTCGACTTCCTGG +GGACACTGTCACAGGGGACAGGCCCCCAGGAGCTGGTGACGCAGGCGCTT +GCTGTCCTCCTGGAGTGCCTCGAGAGCCCCGGCTCCAGCCCCACGGTTCT +GAAGAAGGCCTTCCAGGCCACGCTCAGGTGGCTCCTGAGCTCACCCAAGA +CCCCCGGCTGCTCTGATCTCGGCCCCCTCATCCCGCAGTTCCTCAGAGAG +CTGTTCCCTGTGCTGCAGAAACGCCTGTGCCACCCCTGCTGGGAGGTGAG +GGACTCCGCCCTCGAGTTCCTGACCCAGCTGAGCAGGCACTGGGGAGGAC +AGGCCGACTTCAGATGCGCACTCTTGGCTTCAGAGGTGCCTGAGCTGGCC +CTGCAGCTCCTCCAGGACCCTGAGAGTTATGTCCGAGCGAGCGCGGTGAC +CGCCATGGGGCAGCTGTCCAGCCAGGGCCTGCACGCCCCCACCAGCCCTG +AGCATGCAGAGGCCCGGCAGAGCCTGTTCCCGGAGCTCCTGCACATCCTC +TCCGTAGACTCGGAGGGCTTCCCACGGCGGGCGGTCATGCAAGTCTTCAC +TGAGTGGCTGCGGGACGGCCACGCCGACGCGGCCCGGGACACGGAGCAGT +TCGTGGCCACTGTGCTGCAGGTGGCGAGCCGGGACCTGGACTGGGAGGTC +CGCGCCCAGGGCCTGGAGCTGGCCCTCGTGTTCCTGGGCCAGACTTTGGG +GCCGCCGCGTACCCACTGCCCCTATGCCGTGGCCCTACCCGAGGTGGCCC +CAGCCCAGCCACTCACCGAGGCACTGAGGGCTCTCTGCCACGTGGGGCTC +TTTGACTTCGCCTTTTGTGCCTTGTTTGACTGCGACCGCCCTGTGGCGCA +GAAGTCTTGTGACCTCCTTCTCTTCCTGAGGGACAAGATTGCTTCCTACA +GCAGCCTGCGGGAGGCCAGGGGCGGCCCCAACACTGCCTCCGCAGAGGCC +ACCCTGCCGAGGTGGCGGGCGGGTGAGCAGGCCCAGCCCCCAGGGGACCA +GGAGCCTGAGGCTGTGCTGGCCATGCTCAGGTCCCTAGACCTGGAGGGCC +TGCGGAGCACACTGGCCGAGAGCAGCGACCACGTGGAGAAGAGTCCCCAG +TCCCTCCTGCAGGACATGCTGGCCACGGGAGGCTTCCTGCAGGGGGATGA +GGCCGACTGCTACTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSPTRT00000040520_pantroglodytes.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSPTRT00000040520_pantroglodytes.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSPTRT00000040520_pantroglodytes +ATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGT +CGTGATCGGAGGTGGCATTTCAGGACTATCTGCTGCCAAACTCTTGACTG +AATATGGCGTTAGTGTTTTAGTTTTAGAAGCTCGGGACAGGGTTGGAGGA +AGAACATATACTATAAGGAATGAGCATGTTGATTACGTAGATGTTGGTGG +AGCTTATGTGGGACCAACCCAAAACAGAATCTTACGCTTGTCTAAGGAGC +TGGGCATAGAGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTCAATAT +GTCAAGGGGAAAACATATCCATTTCGGGGCGCCTTTCCACCAGTATGGAA +TCCCATTGCATATTTGGATTACAATAATCTGTGGCGGACAATAGATAACA +TGGGGAAGGAGATTCCAAATGATGCACCCTGGGAGGCTCAACATGCTGAC +GAATGGGACAAAATGACCATGAAAGAGCTCATTGACAAAATCTGCTGGAC +AAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATCAATGTGACCT +CTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCAG +TGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGCGGCCAGGAACG +GAAGTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTCC +TTGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCATGTTGACCAGTCA +AGTGACAACATCATCATAGAGACACTGAACCATGAACATTATGAGTGCAA +ATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAGATTCACTTCA +GACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGTCTTCCAATG +GGAGCTATCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGAA +GAAGGATTACTGTGGCTGCATGATCATTGAAGATGAAGATGCCCCAATTT +CAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCATG +GGCTTCATTCTTGCCCGGAAAGCTGATCGACTTGCTAAGCTACATAAGGA +AATAAGGAAGAAGAAAATCTGTGAGCTCTATGCCAAAGTGCTGGGATCCC +AAGAAGCTTTACATCCAGTGCATTATGAAGAGAAGAACTGGTGTGAGGAG +CAGTACTCTGGGGGCTGCTACACGGCCTACTTCCCTCCTGGGATCATGAC +TCAATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGG +GCACAGAGACTGCCACAAAGTGGAGCGGCTACATGGAAGGGGCAGTTGAG +GCTGGAGAACGAGCAGCTAGGGAGGTCTTAAATGGTCTCGGGAAGGTGAC +CGAGAAAGACATCTGGGTACAAGAACCTGAATCAAAGGACGTTCCAGCGG +TAGAAATCACGCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGGC +CTGCTGAAGATCATTGGATTTTCCACATCAGTAACTACCCTGGGGTTTGT +GCTGTACAAATACAAGCTCCTGCCACGGTCTTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSPTRT00000040521_pantroglodytes.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSPTRT00000040521_pantroglodytes.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSPTRT00000040521_pantroglodytes +ATGAGCAACAAATGCGACGTGGTCGTGGTGGGGGGCGGCATCTCAGGTAA +GGCAGCAGCCAAACTTCTGCATGACTCTGGACTGAATGTGGTTGTTCTGG +AAGCCCGGGACCGTGTGGGAGGCAGGACTTACACTCTTAGGAACCAAAAG +GTTAAATATGTGGACCTTGGAGGATCCTATGTTGGACCAACCCAGAATCG +TATCTTGAGATTAGCCAAGGAGCTAGGATTGGAGACCTACAAAGTGAATG +AGGTTGAGCGTCTGATCCACCATGTAAAGGGCAAATCATACCCCTTCAGG +GGGCCGTTCCCACCTGTATGGAATCCAATTACCTACTTAGATCATAACAA +CTTTTGGAGGACAATGGATGACATGGGGCGAGAGATTCCGAGTGATGCCC +CATGGAAGGCTCCCCTTGCAGAAGAGTGGGACAACATGACAATGAAGGAG +CTACTGGACAAGCTCTGCTGGACAGAATCTGCAAAGCAGCTTGCCACTCT +CTTTGTGAACCTGTGTGTCACTGCAGAGACCCATGAGGTCTCTGCTCTCT +GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGCACAACAAGAATCATCTCG +ACAACGAATGGAGGACAGGAGAGGAAATTTGTGGGCGGATCTGGTCAAGT +GAGCGAGCGGATAATGGACCTCCTTGGAGACCGAGTGAAGCTGGAGAGGC +CTGTGATCTACATTGACCAGACAAGAGAAAATGTCCTTGTGGAGACCCTA +AACCATGAGATGTATGAGGCTAAATATGTGATTAGTGCTATTCCTCCTAC +TCTGGGCATGAAGATTCACTTCAATCCCCCTCTGCCAATGATGAGAAACC +AGATGATCACTCGTGTGCCTTTGGGTTCAGTCATCAAGTGTATAGTTTAT +TATAAAGAGCCTTTCTGGAGGAAAAAGGATTACTGTGGAACCATGATTAT +TGATGGAGAGGAAGCTCCAGTTGCCTACACGTTAGATGATACCAAACCTG +AAGGCAACTATGCTGCCATAATGGGATTTATCCTGGCCCACAAAGCCAGA +AAACTGGCACGTCTTACCAAAGAGGAAAGGTTGAAGAAACTTTGTGAACT +CTATGCCAAGGTTCTGGGTTCCCCAGAAGCTCTGGAGCCAGTGCATTATG +AAGAAAAGAACTGGTGTGAGGAGCAGTACTCTGGGGGCTGCTACACAACT +TACTTCCCCCCTGGGATCCTGACTCAATATGGAAGGGTTCTACGCCAGCC +AGTGGACAGGATTTACTTTGCAGGCACCGAGACTGCCACACACTGGAGCG +GCTACATGGAGGGGGCTGTAGAGGCCGGGGAGAGAGCAGCCCGAGAGATC +CTGCATGCCATGGGGAAGATTCCAGAGGATGAAATCTGGCAGTCAGAACC +AGAGTCTGTGGATGTCCCTGCACAGCCCATCACCACGACCTTTTTGGAGA +GACATTTGCCCTCCGTGCCAGGCCTGCTCAGGCTGATTGGATTGACCACC +ATCTTTTCAGCAACGGCTCTTGGCTTCCTGGCCCACAAAAGGGGGCTACT +TGTGCGAGTCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSRNOT00000041155_rattusnorvegicus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSRNOT00000041155_rattusnorvegicus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,85 @@ +>ENSRNOT00000041155_rattusnorvegicus +ATGGGCTCCGGGAGAGGATGTGAGACGACGGCGGTGCCGTTGCTGATGGC +CGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTGGAGAGG +TGTGCCCGGGAATGGACATCCGGAACAACCTGACCAGGTTGCATGAGCTG +GAGAACTGCTCGGTCATTGAGGGCCATCTGCAGATCCTCTTGATGTTCAA +GACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGA +TCACAGACTACCTGCTTCTTTTCCGTGTCTATGGCCTAGAAAGTCTAAAA +GACCTCTTCCCAAACCTCACAGTCATCCGAGGCTCCCGTCTCTTCTTCAA +CTATGCCCTGGTCATCTTCGAGATGGTCCACCTGAAGGAGCTGGGTCTTT +ACAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGAGAAGAATAAT +GAACTCTGCTACCTGGCCACTATCGACTGGTCCCGCATCCTGGATTCCGT +GGAGGACAACTACATTGTACTGAACAAAGATGACAATGAGGAATGTGGGG +ACGTCTGTCCAGGCACAGCCAAGGGCAAGACCAACTGCCCTGCCACCGTC +ATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACAGTCATTGTCAGAA +AGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACAGCTGAAGGCCTGT +GCTGTCACAAGGAGTGCCTGGGCAACTGTTCAGAACCCGATGACCCTACC +AAGTGTGTGGCCTGTCGAAACTTCTACCTGGATGGTCAGTGTGTGGAGAC +CTGCCCACCACCCTACTATCACTTCCAGGATTGGCGCTGTGTAAACTTCA +GCTTCTGCCAAGACCTTCACTACAAATGCAGGAACTCTCGGAAGCCTGGC +TGTCACCAATACGTCATTCACAACAACAAGTGCATCCCCGAGTGCCCGTC +TGGCTATACCATGAATTCCAGCAACTTGATGTGCACCCCGTGTCTGGGAC +CCTGTCCTAAGGTCTGCCAAATCCTCGAAGGCGAGAAGACCATTGATTCC +GTGACATCTGCCCAGGAGCTCCGAGGCTGCACTGTGATCAATGGCAGCCT +GATTATCAACATCCGAGGGGGCAACAACCTGGCAGCTGAACTAGAGGCTA +ACCTTGGCCTCATTGAAGAAATCTCAGGGTTCCTAAAGATCCGTCGCTCC +TATGCTCTGGTGTCACTTTCTTTCTTCAGGAAGCTACATCTGATTCGAGG +AGAGACCTTGGAAATTGGGAACTATTCTTTCTACGCCTTGGACAACCAGA +ACCTGAGGCAGCTGTGGGACTGGAACAAGCACAACCTCACGATCACTCAG +GGCAAGCTCTTCTTCCACTACAACCCCAAACTCTGCCTGTCTGAGATCCA +CAAGATGGAGGAAGTGTCCGGAACCAAGGGCCGCCAGGAGAGGAACGACA +TTGCCCTGAAGACCAACGGGGACCAGGCATCCTGTGAAAATGAATTACTT +AAATTCTCTTTCATCCGGACGTCTTTTGACAAGATCTTGCTGAGGTGGGA +GCCCTACTGGCCCCCCGACTTCCGAGATCTCCTGGGATTCATGCTGTTCT +ACAAAGAGGCCCCTTATCAGAACGTGACAGAGTTTGACGGGCAGGATGCG +TGTGGCTCCAACAGCTGGACTGTGGTGGATATTGACCCGCCCCAGAGGTC +CAACGACCCTAAGTCTCAGACCCCAAGCCACCCTGGGTGGCTGATGCGGG +GCCTCAAACCCTGGACCCAGTATGCCATCTTTGTCAAGACCTTGGTTACC +TTCTCTGATGAACGCCGGACCTATGGAGCCAAAAGTGATATCATCTATGT +GCAAACAGATGCCACCAATCCTTCCGTTCCCCTGGATCCCATATCAGTTT +CCAACTCCTCATCTCAGATTATCTTAAAGTGGAAGCCCCCCTCGGACCCC +AATGGCAACATCACACACTACCTGGTCTACTGGGAGAGGCAGGCGGAGGA +CAGCGAGCTGTTCGAGTTGGATTATTGTCTCAAAGGGCTGAAGCTCCCCT +CACGCACCTGGTCCCCACCTTTTGAGTCTGACGATTCTCAAAAGCACAAT +CAGAGTGAGTATGACGACTCGGCCAGCGAGTGCTGCTCATGTCCTAAGAC +TGACTCTCAGATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCT +TCGAGGATTACCTGCACAACGTGGTTTTTGTTCCCAGAAAAACCTCTTCA +GGCAATGGTGCTGAGGACACTAGGCCATCCCGAAAGCGAAGATCCCTTGA +AGAGGTGGGCAATGTGACAGCCACTACACCCACACTTCCAGATTTTCCCA +ACATCTCCTCCACCATCGCGCCCACAAGCCACGAAGAGCACAGACCATTT +GAGAAAGTAGTAAACAAGGAGTCACTTGTCATCTCTGGCCTGAGACACTT +CACTGGGTACCGCATTGAGCTGCAGGCATGCAATCAGGACTCCCCAGAAG +AGAGGTGCAGCGTGGCTGCCTACGTCAGTGCCCGGACCATGCCTGAAGCT +AAGGCAGATGACATCGTTGGCCCTGTGACCCATGAAATCTTTGAGAACAA +TGTTGTACACTTAATGTGGCAAGAGCCAAAGGAACCTAATGGTCTGATTG +TGCTATATGAAGTGAGCTATCGGCGATATGGTGATGAGGAGCTGCACCTC +TGTGTCTCCCGGAAGCATTTTGCCCTGGAGCGGGGCTGCAGGCTTCGAGG +GCTCTCTCCAGGAAACTACAGTGTTCGAGTCCGGGCTACCTCTCTGGCAG +GAAATGGCTCCTGGACAGAACCCACCTATTTTTATGTGACTGATTATTTA +GATGTCCCATCAAATATTGCCAAAATTATCATCGGGCCCCTCATCTTCGT +CTTCCTCTTCAGTGTCGTGATCGGAAGTATTTATCTATTCTTGAGGAAGA +GGCAGCCAGATGGGCCAATGGGACCACTGTACGCTTCTTCAAACCCAGAG +TACCTCAGTGCCAGTGATGTCTTTCCATCTTCCGTATACGTTCCGGATGA +GTGGGAGGTACCTCGAGAGAAGATCACCCTCCTCCGAGAGCTGGGGCAGG +GATCCTTCGGTATGGTGTACGAAGGCAATGCCAAGGATATCATCAAGGGT +GAGGTAGAGACCCGTGTTGCGGTGAAGACGGTCAATGAGTCAGCCAGTCT +TCGAGAACGGATCGAGTTCCTCAATGAGGCATCAGTCATGAAGGGCTTCA +CCTGTCATCACGTGGTCCGCCTTCTTGGGGTGGTGTCCAAAGGCCAGCCC +ACATTGGTAGTGATGGAACTGATGGCTCATGGAGACCTGAAAAGTCACCT +CCGTTCTCTGCGGCCCGATGCTGAGAACAACCCAGGCCGTCCTCCCCCTA +CCTTGCAAGAAATGATTCAGATGACAGCAGAAATTGCCGATGGCATGGCA +TACTTGAACGCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGGAACTG +CATGGTTGCCCATGATTTTACTGTCAAAATCGGAGACTTTGGAATGACGA +GAGACATCTACGAGACAGATTACTATCGGAAAGGGGGCAAGGGGTTGCTG +CCCGTGAGGTGGATGTCACCCGAGTCCCTGAAGGACGGAGTCTTCACTGC +TTCTTCCGACATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACCAGCC +TGGCTGAGCAACCTTACCAAGGCCTGTCTAATGAACAGGTGTTGAAATTT +GTCATGGATGGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACT +CACTGACCTGATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCGA +CCTTCCTGGAAATCGTCAACCTGCTCAAGGACGACCTCCACCCCAGCTTT +CCGGAAGTTTCCTTCTTCTACAGCGAGGAGAACAAGGCTCCCGAGAGTGA +AGAGCTGGAGATGGAGTTCGAGGACATGGAGAATGTCCCCTTGGATCGTT +CCTCTCACTGTCAGAGAGAAGAGGCTGGATGCCGGGAGGGAGGGTCCTCT +CTGAGCATCAAACGGACCTATGATGAACACATCCCCTACACCCACATGAA +CGGGGGCAAGAAGAATGGGCGGGTCCTCACCCTGCCGAGGTCGAACCCTT +CCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSRNOT00000044009_rattusnorvegicus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSRNOT00000044009_rattusnorvegicus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSRNOT00000044009_rattusnorvegicus +ATGAGCAACAAATGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTAT +GGCAGCAGCCAAACTTTTGCATGACTGTGGCCTCAGTGTGGTGGTTCTGG +AAGCACGAGACCGTGTGGGAGGCAGGACTTACACAATTAGGAATAAAAAT +GTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCGACCCAGAATCG +TATCTTACGATTGGCCAAAGAGCTAGGATTGGAGACCTATAAAGTGAATG +AAGTTGAGCGGCTGATCCACTTTGTAAAGGGAAAATCATATGCCTTCAGG +GGCCCATTCCCACCAGTGTGGAATCCAATCACTTACCTAGATTATAACAA +CCTCTGGAGAACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTC +CATGGAAGGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAAGAG +TTGCTAGATAAGATCTGCTGGACCAACTCTACAAAGCAGATTGCCACACT +CTTTGTGAACCTATGTGTAACTGCGGAGACCCATGAGGTTTCTGCACTGT +GGTTCCTGTGGTATGTGAAGCAGTGTGGGGGTACAACCAGAATCATATCA +ACAACCAATGGAGGACAGGAGAGGAAATTTATTGGTGGATCTGGTCAAGT +GAGTGAGCGGATAAAGGATATCCTTGGGGACAGAGTGAAGCTGGAGAGGC +CGGTGATCCACATTGACCAGACAGGAGAAAATGTTGTTGTGAAAACCCTA +AACCATGAAATATATGAGGCTAAATATGTGATTAGTGCCATCCCACCTGT +TTTGGGCATGAAGATTCACCATAGTCCTCCTCTGCCCATTCTAAGAAACC +AGCTGATTACTCGTGTGCCTTTGGGTTCAGTTATTAAGTGCATGGTTTAT +TATAAAGAACCCTTCTGGAGGAAAAAGGATTTCTGTGGAACCATGGTTAT +TGAAGGAGAGGAAGCTCCAATTGCGTACACATTGGATGATACCAAGCCAG +ATGGCAGCTGTGCTGCTATAATGGGATTTATCCTTGCTCACAAAGCTAGA +AAACTGGTACGCCTTACTAAAGAAGAAAGACTGAGGAAGCTCTGTGAGCT +ATACGCGAAAGTTCTGAACTCTCAAGAAGCTCTGCAGCCAGTCCATTATG +AAGAGAAGAACTGGTGTGAGGAGCAGTACTCCGGGGGCTGCTACACAGCC +TACTTCCCTCCTGGCATCTTGACCCAGTATGGAAGGGTTCTACGCCAGCC +AGTGGGCAAGATTTTCTTTGCAGGCACCGAGACAGCTTCACATTGGAGTG +GCTACATGGAGGGGGCTGTAGAGGCTGGAGAGAGAGCTGCCAGAGAGATT +CTTCATGCCATTGGGAAGATTCCAGAGGATGAAATTTGGCAGCCAGAACC +AGAATCTGTGGATGTCCCAGCAAGACCCATTACCAACACCTTCCTGGAGA +GACACTTGCCTTCTGTACCAGGTCTACTAAAGCTGCTTGGATTGACCACC +ATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAAGGGTCTGTT +TGTACGTTTCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSRNOT00000064726_rattusnorvegicus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSRNOT00000064726_rattusnorvegicus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,51 @@ +>ENSRNOT00000064726_rattusnorvegicus +ATGGACGCAGAATGCTCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGC +AGATCCTAGACAGCTGGTGGCAGATGACACCTGCTTGGAGAAACTACTGG +ACTGGTTTAAAACAGTGACAGAGGCAGAGCCCAGCCTCCAACTACTGCAG +GACCACCCCTGCCTAATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGA +TGTGAGCCCTAGGGTCCTCTCCTTTGCTCTGCGCCTCGTTGGGGTCTTTG +CGGCCCAGGAGGACTGTTTCCAGTACCTTCAGCAGGGGGAGTTGTTGCTG +GGGCTCTTTGGGGAGACAGGTGCCCTTAGCTGGGCAGCCTGGAGCATCCC +CAGTGTGCGCAGCGGCTGGATCCAGGGCCTGTGCTCCCTGGCACACCACC +CCAGTGCCCTGCACTTCCTGGCTGACAGTGGTGCTGTGGACACGATCTTC +TCCTTGCAAGGAGACCCCAGCCTGTTTGTAGCCTCAGCAGCCAGCCAGCT +CCTAGTACACATCCTGGCTCTGTCAATGCAAGGCGGAGCTCCAGGGTCCC +CCGTCCCTGAAGCCGTTGCCTGGCCTGTCTGTGCCCAGAAGATCATGAAC +CATGTAGAAGAGTCCTTGCATTCCAAAGCCACCCCACAGGTCACACAGGC +CTTGAATGTCCTGACGACGACCTTCGGGCGCTGCCACAACCCCTGGACAG +GGGTCCTCTGGGAGCGGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGA +GACCCCATTCCTGCCACACACTCGCTCATGGACCTGCTTCTCAGTGTGGC +CAGGTCTCCTGTGTTGAACTTTGCAGCCTGTGGCCTGTGGGAGATGCTGG +CCCAGACTCTGAGCCGCCTGAGCCCCACCCAAGCTGGGCCTCTAGCTCTG +GGGACCCTGAAACTTCAGCATTGTCCCCAGGAACTGAGGACCCAGGCCTT +TAGAGTCCTCCTTCAGCCACTGGCCTGCATCCTGAAAGCTACCACTCAGG +CCCCTGGACCTCCAGGCTTGCTGGACGGGACTGCGGGTAGCTTGCTGACT +GTGGATGCACTCTTATCTTCAAAGTCGGCCTGTGTGGGGCTCCTCTGCCA +GACTCTGGCGCACCTGGAGGAGCTGCAGATGCTGCCCCAGTGCCCCTCAC +CGTGGCCACAGGTGCCTCTGCTGCAAGCTGCTGTGACGATATTGCGTCTC +TCTGACGGCTCGGCGGACCCCAGTTCCAGTGCAGGAGGCCGTCTCTGTGG +GGCGCTGGGTGGCTGTGTTCGTGTCCAGCGAGCAGCCCTTGACTTCTTGG +GGACGCTGTCTCTGGGGACAAGCCCCCTGGAATTGGTGCTGGAGGTATTT +GCTGTCCTCCTGAAGACCCTGGAGAGCCCAGAGTCCAGCCCCATGGTCCT +AAAGAAGGCCTTCCAGGCCACACTCAGATGGCTCCAGAGCCCACACAAGA +CCCCCAGCGGCTCTGATCTCAGCCCCGATGCCTTGCTGTTCCTCGGAGAG +CTATTCCCCATACTACAGAAGCGCCTGTGCAGCCCGTGTTGGGAGGTGAG +GGACTCAGCCCTGGAGTTCCTGACGCATCTGATCCGGGACTGGGGAGGGC +AGGCTGACTTCAGAGAGGCACTGCATTCTTCAGAAGTACCCACACTTGCC +CGCCAGCTCCTCCAAGACCCTGAGAGTTATGTCCGAGCAAGTGCAGTGGG +TGCCGCTGGGCAGCTCTCCAGCCAGGGCCTTCAGGCCACTCCCGCCAACC +AGCAGGGCCTACTCATGGACCTCATGCATATCCTGTCCACGGACTCAGAG +GGCTTCCCTCGAAGAGCTGTGTTACGGGTCTTTACTGAATGGCTGAGGGA +TGGCCATGCTGATGTGGTTCGAGACACAGAGTGGTTCGTGGCCACTGTTC +TCCAGGCAGTGAGCCGGGATCTGGACTGGGAGGTCCGAGTGCAGGGCTTG +GAGCTGGCACAGGTATTCCTCATCCAGGCAATGGGGCAGCCTAGACTCCA +CTGTCCCTATACAGTAGGCCTGCCTGGGGCCACCTCTTCCCGCCCACACC +TGGAATTCTTGCAGACTCTCTGCCGTCTGCCACTCTTTGAGTTTGCCTTT +TGTGCCTTGCTTGACTGTGACCGCCCGGTGGCCCAAAAAGCCTGTGACCT +GCTCCTCTTCTTGAGGGACAAGACAGTTTCCTGCAGTAACCCTCAGGAGG +CCGGGGACAGCCCCAACTCAGCCTCAGTGGAGGCTGCCCTGCAGAGGTGG +CGGGAAGGTGAGCAGGCTCAGCCCCTAGGGGACCTGGAGCCTGAAGCCAT +GCTGGCCATCCTCAGGTCCTTAGACCTGGAGGGCCTGCAGGGCAGGCTGG +CCAAGAGCAGTGACCATGTGGAGAAGAGCCCACAGTCCCTGCTGCAGGAC +ATGCTGGCCACGGTGGGCGTGTTGGAGGAGAATGAAGCTGACTGCTACTA +A |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSRNOT00000066674_rattusnorvegicus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSRNOT00000066674_rattusnorvegicus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSRNOT00000066674_rattusnorvegicus +ATGACGGATCTGGAGAAGCCCAATCTCGCAGGCCACATGTTCGACGTAGT +CGTGATTGGAGGCGGCATCTCAGGATTGGCTGCTGCCAAACTGTTGTCTG +AATACAAAATTAATGTCTTGGTTTTGGAAGCCCGGGATAGAGTTGGAGGA +AGAACATATACTGTGAGGAATGAGCATGTCAAATGGGTAGATGTTGGTGG +AGCCTATGTGGGACCAACCCAGAACAGAATCTTACGCTTGTCTAAGGAGC +TAGGCATAGAGACCTATAAAGTGAATGTCAATGAGCGTCTAGTTCAATAT +GTCAAGGGGAAAACTTACCCATTCCGTGGTGCATTCCCACCTGTGTGGAA +CCCCTTGGCATATTTGGATTACAACAACCTATGGAGAACAATGGATGAAA +TGGGAAAAGAGATCCCCGTTGATGCACCGTGGCAAGCAAGACACGCTCAG +GAATGGGACAAGATGACCATGAAAGATCTCATTGATAAAATCTGTTGGAC +AAAAACTGCTCGGGAATTTGCGTATCTTTTTGTGAACATTAATGTGACTT +CTGAGCCTCATGAGGTATCTGCCCTGTGGTTCCTGTGGTATGTGAGGCAG +TGTGGGGGCACTGCTCGGATATTCTCAGTTACCAATGGCGGCCAGGAACG +GAAATTTGTAGGTGGATCTGGCCAAGTAAGTGAACAGATAATGGGTCTCC +TTGGAGATAAAGTGAAGCTGAGCTCTCCTGTTACTTATATTGACCAAACA +GATGACAACATCATTGTAGAAACACTGAATCATGAACACTATGAGTGCAA +ATACGTAATTAGTGCCATCCCACCGATTTTGACTGCCAAGATCCACTTTA +AACCAGAGCTTCCACCTGAGAGAAACCAATTAATTCAGCGTCTTCCAATG +GGGGCTGTTATCAAGTGCATGGTGTATTACAAGGAAGCCTTCTGGAAGAA +AAAGGACTATTGTGGCTGCATGATCATTGAAGATGAGGAGGCTCCAATCG +CCATCACTCTGGATGACACTAAACCAGATGGGTCACTGCCTGCCATCATG +GGCTTCATACTTGCCCGGAAAGCTGATCGACTTGCTAAACTACATAAAGA +CATAAGGAAGAGGAAAATCTGTGAGCTGTATGCCAAAGTTCTGGGATCTC +AAGAAGCATTATATCCAGTCCATTATGAAGAGAAGAACTGGTGTGAGGAG +CAGTACTCCGGGGGCTGCTACACAGCCTACTTCCCTCCTGGTATCATGAC +CCAGTATGGAAGGGTGATTCGCCAGCCAGTAGGTAGGATTTACTTTGCAG +GCACAGAGACAGCAACACAGTGGAGTGGCTACATGGAAGGAGCAGTTGAA +GCTGGAGAACGAGCAGCTAGAGAGGTGTTGAATGCTCTAGGAAAAGTCGC +GAAGAAGGATATATGGGTTGAAGAACCCGAGTCCAAGGATGTTCCAGCCA +TTGAAATTACCCACACCTTCTTAGAGAGGAACCTGCCTTCCGTGCCTGGT +CTGCTCAAGATCACTGGTGTTTCCACTTCTGTGGCTCTTCTCTGCTTTGT +ATTGTACAAGATTAAGAAGCTCCCATGCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSRNOT00000067448_rattusnorvegicus.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSRNOT00000067448_rattusnorvegicus.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,85 @@ +>ENSRNOT00000067448_rattusnorvegicus +ATGGGCTCCGGGAGAGGATGTGAGACGACGGCGGTGCCGTTGCTGATGGC +CGTGGCCGTTGCTGGTGGCACAGCCGGCCACCTGTACCCTGGAGAGGTGT +GCCCGGGAATGGACATCCGGAACAACCTGACCAGGTTGCATGAGCTGGAG +AACTGCTCGGTCATTGAGGGCCATCTGCAGATCCTCTTGATGTTCAAGAC +CAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGATCA +CAGACTACCTGCTTCTTTTCCGTGTCTATGGCCTAGAAAGTCTAAAAGAC +CTCTTCCCAAACCTCACAGTCATCCGAGGCTCCCGTCTCTTCTTCAACTA +TGCCCTGGTCATCTTCGAGATGGTCCACCTGAAGGAGCTGGGTCTTTACA +ACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGAGAAGAATAATGAA +CTCTGCTACCTGGCCACTATCGACTGGTCCCGCATCCTGGATTCCGTGGA +GGACAACTACATTGTACTGAACAAAGATGACAATGAGGAATGTGGGGACG +TCTGTCCAGGCACAGCCAAGGGCAAGACCAACTGCCCTGCCACCGTCATC +AATGGGCAGTTTGTGGAACGGTGCTGGACACACAGTCATTGTCAGAAAGT +TTGCCCAACCATCTGTAAGTCACATGGCTGCACAGCTGAAGGCCTGTGCT +GTCACAAGGAGTGCCTGGGCAACTGTTCAGAACCCGATGACCCTACCAAG +TGTGTGGCCTGTCGAAACTTCTACCTGGATGGTCAGTGTGTGGAGACCTG +CCCACCACCCTACTATCACTTCCAGGATTGGCGCTGTGTAAACTTCAGCT +TCTGCCAAGACCTTCACTACAAATGCAGGAACTCTCGGAAGCCTGGCTGT +CACCAATACGTCATTCACAACAACAAGTGCATCCCCGAGTGCCCGTCTGG +CTATACCATGAATTCCAGCAACTTGATGTGCACCCCGTGTCTGGGACCCT +GTCCTAAGGTCTGCCAAATCCTCGAAGGCGAGAAGACCATTGATTCCGTG +ACATCTGCCCAGGAGCTCCGAGGCTGCACTGTGATCAATGGCAGCCTGAT +TATCAACATCCGAGGGGGCAACAACCTGGCAGCTGAACTAGAGGCTAACC +TTGGCCTCATTGAAGAAATCTCAGGGTTCCTAAAGATCCGTCGCTCCTAT +GCTCTGGTGTCACTTTCTTTCTTCAGGAAGCTACATCTGATTCGAGGAGA +GACCTTGGAAATTGGGAACTATTCTTTCTACGCCTTGGACAACCAGAACC +TGAGGCAGCTGTGGGACTGGAACAAGCACAACCTCACGATCACTCAGGGC +AAGCTCTTCTTCCACTACAACCCCAAACTCTGCCTGTCTGAGATCCACAA +GATGGAGGAAGTGTCCGGAACCAAGGGCCGCCAGGAGAGGAACGACATTG +CCCTGAAGACCAACGGGGACCAGGCATCCTGTGAAAATGAATTACTTAAA +TTCTCTTTCATCCGGACGTCTTTTGACAAGATCTTGCTGAGGTGGGAGCC +CTACTGGCCCCCCGACTTCCGAGATCTCCTGGGATTCATGCTGTTCTACA +AAGAGGCCCCTTATCAGAACGTGACAGAGTTTGACGGGCAGGATGCGTGT +GGCTCCAACAGCTGGACTGTGGTGGATATTGACCCGCCCCAGAGGTCCAA +CGACCCTAAGTCTCAGACCCCAAGCCACCCTGGGTGGCTGATGCGGGGCC +TCAAACCCTGGACCCAGTATGCCATCTTTGTCAAGACCTTGGTTACCTTC +TCTGATGAACGCCGGACCTATGGAGCCAAAAGTGATATCATCTATGTGCA +AACAGATGCCACCAATCCTTCCGTTCCCCTGGATCCCATATCAGTTTCCA +ACTCCTCATCTCAGATTATCTTAAAGTGGAAGCCCCCCTCGGACCCCAAT +GGCAACATCACACACTACCTGGTCTACTGGGAGAGGCAGGCGGAGGACAG +CGAGCTGTTCGAGTTGGATTATTGTCTCAAAGGGCTGAAGCTCCCCTCAC +GCACCTGGTCCCCACCTTTTGAGTCTGACGATTCTCAAAAGCACAATCAG +AGTGAGTATGACGACTCGGCCAGCGAGTGCTGCTCATGTCCTAAGACTGA +CTCTCAGATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCTTCG +AGGATTACCTGCACAACGTGGTTTTTGTTCCCAGAAAAACCTCTTCAGGC +AATGGTGCTGAGGACACTAGGCCATCCCGAAAGCGAAGATCCCTTGAAGA +GGTGGGCAATGTGACAGCCACTACACCCACACTTCCAGATTTTCCCAACA +TCTCCTCCACCATCGCGCCCACAAGCCACGAAGAGCACAGACCATTTGAG +AAAGTAGTAAACAAGGAGTCACTTGTCATCTCTGGCCTGAGACACTTCAC +TGGGTACCGCATTGAGCTGCAGGCATGCAATCAGGACTCCCCAGAAGAGA +GGTGCAGCGTGGCTGCCTACGTCAGTGCCCGGACCATGCCTGAAGCTAAG +GCAGATGACATCGTTGGCCCTGTGACCCATGAAATCTTTGAGAACAATGT +TGTACACTTAATGTGGCAAGAGCCAAAGGAACCTAATGGTCTGATTGTGC +TATATGAAGTGAGCTATCGGCGATATGGTGATGAGGAGCTGCACCTCTGT +GTCTCCCGGAAGCATTTTGCCCTGGAGCGGGGCTGCAGGCTTCGAGGGCT +CTCTCCAGGAAACTACAGTGTTCGAGTCCGGGCTACCTCTCTGGCAGGAA +ATGGCTCCTGGACAGAACCCACCTATTTTTATGTGACTGATTATTTAGAT +GTCCCATCAAATATTGCCAAAATTATCATCGGGCCCCTCATCTTCGTCTT +CCTCTTCAGTGTCGTGATCGGAAGTATTTATCTATTCTTGAGGAAGAGGC +AGCCAGATGGGCCAATGGGACCACTGTACGCTTCTTCAAACCCAGAGTAC +CTCAGTGCCAGTGATGTCTTTCCATCTTCCGTATACGTTCCGGATGAGTG +GGAGGTACCTCGAGAGAAGATCACCCTCCTCCGAGAGCTGGGGCAGGGAT +CCTTCGGTATGGTGTACGAAGGCAATGCCAAGGATATCATCAAGGGTGAG +GTAGAGACCCGTGTTGCGGTGAAGACGGTCAATGAGTCAGCCAGTCTTCG +AGAACGGATCGAGTTCCTCAATGAGGCATCAGTCATGAAGGGCTTCACCT +GTCATCACGTGGTCCGCCTTCTTGGGGTGGTGTCCAAAGGCCAGCCCACA +TTGGTAGTGATGGAACTGATGGCTCATGGAGACCTGAAAAGTCACCTCCG +TTCTCTGCGGCCCGATGCTGAGAACAACCCAGGCCGTCCTCCCCCTACCT +TGCAAGAAATGATTCAGATGACAGCAGAAATTGCCGATGGCATGGCATAC +TTGAACGCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGGAACTGCAT +GGTTGCCCATGATTTTACTGTCAAAATCGGAGACTTTGGAATGACGAGAG +ACATCTACGAGACAGATTACTATCGGAAAGGGGGCAAGGGGTTGCTGCCC +GTGAGGTGGATGTCACCCGAGTCCCTGAAGGACGGAGTCTTCACTGCTTC +TTCCGACATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACCAGCCTGG +CTGAGCAACCTTACCAAGGCCTGTCTAATGAACAGGTGTTGAAATTTGTC +ATGGATGGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTCAC +TGACCTGATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCGACCT +TCCTGGAAATCGTCAACCTGCTCAAGGACGACCTCCACCCCAGCTTTCCG +GAAGTTTCCTTCTTCTACAGCGAGGAGAACAAGGCTCCCGAGAGTGAAGA +GCTGGAGATGGAGTTCGAGGACATGGAGAATGTCCCCTTGGATCGTTCCT +CTCACTGTCAGAGAGAAGAGGCTGGATGCCGGGAGGGAGGGTCCTCTCTG +AGCATCAAACGGACCTATGATGAACACATCCCCTACACCCACATGAACGG +GGGCAAGAAGAATGGGCGGGTCCTCACCCTGCCGAGGTCGAACCCTTCCT +AA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSSSCT00000008295_susscrofa.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSSSCT00000008295_susscrofa.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,50 @@ +>ENSSSCT00000008295_susscrofa +ATGGACCCGGAGTGCTCCCGGCTCCTCCCGGCTCTCTGTGCCGTCCTGGC +AGACCCCCGGCAGCCTGTGGCAGATGATACTTGCTTGGAGAAGCTGCTGG +ACTGGTTTAAAACAATAACTGAAGCAGGGTCCAGTCTCCTGGTGCTACAG +GAAAATCCCTGCCTGGTGGAGCTGCTGTTCGACGTGCTGAAACCCCAGGA +CCTGAGTCCCAGAGTCCTCTCCTTCTCACTCCGCCTCGCAGGCATGTTCG +CAGCCCAGGAAGACTGCTTCCAGTACCTTCAGCAGGGGGAGTTGCTGCCC +AGGCTGTTTGGGGAGGCGGGCCCCCTGGGAGGAGCGGCCTGGACGGCCCC +GACCGTGCGCAGCGGCTGGATCCAGGGCCTGCGCTCCCTGGCGCAGCACC +CTCGCGCCCTGCCCTTCCTTGCCGACTGTGGTGCCGTTGACACCATCTTC +TCCCTGCAGGGAGATTCCAGCCTGTTTGTGGCCTCGGCAGCCGGGCAGCT +CCTGGTGCACATCCTGGACTTGGCGATGCGAGCCCCGCCCCGGGGACACC +CCGGCCCGCAGGCGTGTGACGGGCCAGCGTGCGCCCAGAAGATCGTGTGT +CACCTCGAAGACTCCCTGCGCGCCGCAGCCGCCCCGCAGCTCACGCAGGC +CCTGAATGTCCTGACCACCACGTTCGGGCACTGCCACGGCCTTTGGACGC +CGGGCCTTTGGGGGCGGCTGAGCCCTCTTGTGGGGCACCTGCTCGAGAAA +GACCCCGTCCCAGCCTCGCACGCGCTCGTGGACCTCCTCCTCAGCGTGGC +CCGGTCCCCTGTGCTGAGTTCTGAGAGTGGCCCGTGGGAGACTTTGGCGC +TGACTCTGAGCCGCTTGAGCCCGATGCAAGCAGGGCCTCTGGCTTTGGGG +ATCCTGAAGCTGCAGGACTGCCCACAGGCCTTGAGGACCCAGGCCTCTGG +CGTCCTCCTCCAGCCCCTGGCCTGTGTCCTGAAAGCTGCTGTGCAGGGCC +CCGGACGCCCAGGTAGGCTGCTGGGGAAGGGGGGCAGGTGCAGGATGGCA +GGACCGTGGGGGCCTGAGCGCATCCTTGGGGCCGGCGCAGGCTGTCATCC +CAGGTGTGACTGCTGCTCCTGTTGCCACCCTGGAANCAGTGCCCTTGGCC +TGGCCCAAGAGGCCCGCCTGAGGCTGTGTGACAATGCTGCGATCCCCCGC +TCTGACCTGGGGGGCCAATTCTGTGGCCACCTGGTGGCCTGTGTCCGAGT +CCAGCGAGCGGCCCTGGATTTCCTGGGGACGCTGTCTCAGAGGGCGGGCC +CCCAAGAGCTGGTGACGCAGGTTTCTGCTGTCCTCCTGGAGTACCTTTCA +GGCCCTGACTCCAGCCCCACGGTTCTGAAGAAGGCCTTCCAGGCCTCACT +CGGGTGGCTCCTGAGCTCACCCAAGACCCCCGGCTGCTGCGATCTGGACC +CCCACGCCCAGCAGTTCCTCAGAGAGCTGCTCCCTGTGCTGCAGAAGCGC +CTGTGCAGCCCCTGCTGGGAGGTGAGGGACTCAGGCCTTGAGTTCCTGAC +CCAGATGGCCAGACACTGGGGAGGGCAGGCCGCCTTCAGACAGGTGCTCC +TTGCTTCCGAGGTGCCCAGGCTCACCAGGCAGCTCCTGCAAGACCCCGAG +AGTTACGTCCGCGCAAGCGCAGTGACCGCCACAGGGCAGCTGTCTAGCTG +GGGGCTGCATGCTGCCCCCGCCGGCCCTGAGCACCCAGGGGTCCAGCAGA +AGAGCCTCCTGTCGGAGCTCCTGCACGTCCTCGCCACAGACTCGGAGGGC +TTCCCCCGGAGGGCCGTCATGCAGGTCTTCACCGAGTGGCTGAGGGGCGG +CCATGCTGACGTGGCCGAGGACCCAGAGCAGTTTGTGGCCGGAGTGCTCC +AGGCCGCGAGCAGGGACCTGGACTGGGAGGTCCGGGCCCAGGGCCTCGAG +CTGGCGCTGGTGTTCCTGGAGCAGCTGCTGGGCCCGCCCGGCGTGCGCTG +TCCCTACGCCGTGGCCCTGCCCAAGGCAGCCCCGCCTGGCACGCTGGCCC +AGGCCTTGCAGGCACTGTGCCGAGTGCAGCTCTTCGAGTTCGCCTTCCGT +GCCTTGTTCGACTGCGACCGACCTGTGGCGCAGAAGTCCTGTGACCTCCT +CCTCTTCCTGAAGGCCAAGGCCACTTCCTGCGGCACCCCCCAGGAGGAAC +GGGACAGCCCCGACGTGTCCTCCGTGGAGGCCACACTGCAGAAGTGGCAG +GCAGGGGAGCACGGACACCCCCTGGGGGACCTGGAGCCCGCGGCTGTTGT +GGCCGTGCTCAGGTCCATGGACTTGGAAGGCCTTCAGGACACACTGGCCG +AGAGCAGTGACCACGTGGAGAGGAGCCCCCAGTCGCTCCTGCAGGACATG +CTGGCCACCGTGGGCGTCCTCGGGGAGAATGAGGCCGACTGCTACTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSSSCT00000013404_susscrofa.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSSSCT00000013404_susscrofa.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENSSSCT00000013404_susscrofa +ATGGAGCGTCAGGAGAAGGCGAACAACGCGGGCCACATGGTCGACGTAGT +CGTGATAGGAGGCGGCATCTCAGGATTATCTGCTGCCAAACTCTTAAATG +AATATGGAATTAATGTTTTGGTTTTAGAAGCCCGGGACAGAGTTGGAGGA +AGAACATACACAGTGAGGAACGAAAATGTTGATTACGTGGACGTTGGTGG +GGCTTATGTCGGACCGACCCAGAATAGGATCTTAAGGTTATCTAAGGAAC +TGGGTTTAGAAACTTACAAAGTGAATGTAAATGAGTGTCTCGTTCAGTAT +GTCAAGGGGAAATCTTATCCATTTCGGGGTGCCTTCCCTCCAGTCTGGAA +TCCCATTGCCTATCTGGATTACAACAACCTGTGGCGGACAATGGATGACA +TGGGAAAGAAGATTCCAGCTGATGCACCATGGGAGTCTCCGCATGCAGAG +GAATGGGATAAGATGACCATGAAAGATCTCATCGATAAAATCTGTTGGAC +AAAGACTGCTAAACGGTTTGCATCTCTCTTTGTAAATATCAATGTGACCT +CCGAACCCCACGAAGTGTCTGCCCTGTGGTTTTTGTGGTATGTGAAGCAG +TGTGGAGGCACCACCCGGATATTCTCTGTTACCAACGGGGGCCAGGAACG +GAAGTTTGTAGGCGGATCTGGTCAAGTAAGCGAACGGATAATGCACCTCC +TCGGGGACAGAGTGAAGCTGAGGTGTCCTGTCACCTATGTTGACCAGTCA +GGTGACAACATCATCGTAGAGACATTGAATCATGAACTTTATGAGTGCCA +ATACGTAATTAGTGCCATCCCTCCAACTCTGACTGCCAAGATACACTTCA +GACCGGAGCTTCCGTCAGAAAGAAACCAGTTAATTCAGCGTCTTCCGATG +GGGGCTATCATTAAGTGCATGATGTATTACAAGGAGGCCTTTTGGAAGAA +GAAGAATTACTGTGGCTGTATGATCATCGAAGATGAGGAAGCTCCGATTT +CAATAACTCTAGATGACACCAAGCCAGATGGATCGCTGCCCGCCATCATG +GGCTTCATCCTTGCTCGAAAAGCTGACCGCCTTGCTAAGGTTCATAAAGA +AATAAGAAAGCGGAAAATCTGTGAGCTCTACGCCAAAGTGCTAGGATCTC +AAGAAGCTTTACATCCCGTGCACTATGAAGAGAAGAACTGGTGTGAGGAG +CAGTACTCGGGGGGCTGCTACACTGCCTACTTCCCCCCTGGGATCATGAC +TCAGTATGGAAGGGTGATCCGCCAGCCCGTAGGCAGGATATTCTTTGCTG +GCACCGAGACTGCCACACAATGGAGCGGTTACATGGAAGGAGCAGTAGAA +GCCGGCGAACGGGCGGCTAGAGAGATCTTGAATGCTTTGGGGAAGGTGTC +AAAGAAAGACATATGGCTTCGAGAACCTGAATCAGAGGATGTTCCAGCTT +TTGAGATCACCCGCACCTTCTGGGAGAGAAACCTGCCTTCCGTGACCGGG +CTGCTTAAGATCATCGGATTTTCCACCTCGGTAACTGCCCTGTGGCTTGC +CGTGTACAAATTCAGGCTGCTGACCCGATCCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSSSCT00000014817_susscrofa.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSSSCT00000014817_susscrofa.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,37 @@ +>ENSSSCT00000014817_susscrofa +GTGTGCCCAGGGATGGATATCCGGAATAACCTTACACGGCTGCACGAGTT +GGCCAACTGCTCGGTCATCGAAGGACATTTGCAGATCCTGTTGATGTTCA +AAACGCGGCCCGAGGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATG +ATCACTGATTACTTGCTGCTCTTCCGGGTCTACGGGCTGGAGAGCCTGAA +GGACCTGTTCCCCAACCTCACCGTCATCCGGGGCTCACGCCTCTTCTTTA +ACTATGCGCTGGTCATCTTTGAGATGGTTCACTTGAAGGAGCTTGGCCTC +TACAATTTGATGAACATCACCAGGGGTGCTGTCCGCATCGAGAAGAACAA +TGAGCTCTGCTACCTGGCGACCATTGACTGGTCGCGCATCCTGGACTCTG +TGGAGGATAATTACATTGTGCTGAACAAAGACGACAACGAGGAGTGTGGG +GACATTTGCCCAGGCACTGCGAAGGGCAAGACCAATTGCCCTGCCACCGT +CATCAATGGGCAATTTGTCGAGCGGTGTTGGACGCACAGTCACTGCCAGA +AAGTGTGCCCGACCATCTGTAAGTCGCACGGCTGCACTGCTGAGGGCCTC +TGCTGTCACAGCGAGTGTTTGGGCAACTGCTCTGAGCCAGACGACCCCAC +CAAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGATGCGTGGAGA +CCTGCCCGCCCCCCTACTACCACTTCCAAGACTGGCGCTGCGTGAACTTC +AGCTTCTGCCAGGACCTGCACAACAAATGCAAGAACTCAAGGAGGCAGGG +CTGCCACCAGTACGTCATTCACAACAACAAGTGTATCCCTGAGTGCCCCT +CAGGGTACACGATGAATTCCAGCAACTTGATGTGCACTCCGTGCCTAGGC +CCCTGTCCCAAAGTGTGTCACCTCCTGGAAGGCGAGAAGACCATCGACTC +AGTGACATCCGCCCAGGAGCTCCGAGGCTGCACCATTATCAACGGGAGCC +TAATCATCAACATTCGAGGAGGCAACAACCTGGCAGCCGAACTAGAGGCC +AACCTTGGACTCATTGAGGAGATTTCAGGGTACCTGAAAATCCGCCGATC +CTATGCCCTCGTGTCACTTTCCTTCTTCCGGAAGTTGCGTCTGATCCGAG +GGGAGACGTTGGAAATTGGGAACTATTCTTTCTATGCCTTGGACAACCAG +AACCTAAGGCAACTGTGGGACTGGAGCAAACACAACCTCACCATCACTCA +GGGGAAACTCTTCTTCCATTATAATCCCAAACTCTGCTTGTCGGAAATTC +ACAAGATGGAGGAAGTTTCTGGAACCAAGGGGCGCCAGGAGAGAAATGAT +ATTGCCCTGAAGACCAATGGGGACCAGGCGTCCTGTGAAAATGAGTTACT +TAAATTTTCTTACATTCGGACATCTTATGACAAGATCTTGCTGAAGTGGG +AGCCGTATTGGCCCCCCGACTTCCGAGACCTCCTGGGGTTCATGCTCTTC +TACAAAGAGGCCCCTTATCAGAACGTGACGGAGTTTGACGGGCAGGATGC +GTGTGGCTCCAACAGCTGGACGGTGGTGGACATTGACCCGCCTACGAGGT +CCAATGACCCCAAGTCCCAGAACCATCCTGGGTGGCTGATGCGTGGTCTC +AAGCCCTGGACCCAGTATGCCATCTTTGTCAAGACTTTGGTCACCTTTTC +TGATGAACGACGCACCTATGGAGCCAAGAGTGACATCATCTACGTCCAGA +CAGATGCCACAAGTAAGCATGTC |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSSSCT00000023183_susscrofa.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSSSCT00000023183_susscrofa.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,32 @@ +>ENSSSCT00000023183_susscrofa +ATGGCAGCGGCCAAACTTCTGCATGACTCTGGCCTGAGTGTGATTGTTCT +GGAAGCCCGGGACCGCGTGGGAGGCAGGACTTACACCGTCAGGAACCAAC +AAGTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACTCAGAAT +CGCATCTTAAGATTGTCCAAGGAGCTAGGATTGGAGACCTACAAAGTGAA +TGAAGTGGAGCGTCTGATTCACTATATCAAAGGCAAATCCTACCCCTTCA +GGGGCCCATTACCACCTGTGAGGAATCCGATTACCTTCCTAGATCTTAAC +AACCTTTGGAGGACGGTGGATGACATGGGACGAGAGATTCCCAGTGATGC +CCCATGGAAGGCGCCCCTTGCAGAACAGTGGGACCAGATGACAATGAAGG +AGCTGTTGGACAAGCTCTGCTGGACTGAATCTTCGAAGCAGCTGGCCACC +CTTTTTGTGAACCTGTGTGTCACCGCGGAGACCCATGAGGTCTCTGCTCT +CTGGTTCCTGTGGTATGTGAAGCAGTGTGGAGGCACCACCAGGATCATCT +CAACAACTAACGGAGGGCAGGAGAGGAAATTTGTGGGCGGATCTGGTCAA +GTGACCGAGCGGATAAAGGACCTCCTTGGAGACCGAGTGAAGCTGGAGAG +GCCTGTGGTCCACATTGACCAGACAGGAGAAAATGTCCTCGTGGAGACCC +TAAACCACGAGGTGTACGAGGCTAAGTATGTGATTAGCGCCATTCCTCCT +GTCCTGGGCATGAAGATTCATTTCAGTCCCCCTCTGCCAATGATGAGAAA +CCAGCTCATCACTCGTGTACCTCTGGGCTCTGTCATCAAGTGTATAGTTT +ATTACAAAGAGCCCTTCTGGAGGCATAAGGATTACTGTGGAAGCATGATT +ATTGAAGGAGAGGAAGCTCCAATCGCCTACACGTTGGATGATTCCAAGCC +TGATGGCAGCTGTGCCGCCATCATAGGATTTATCCTTGCCCACAAAGCCA +GAAAACTGGCCCGTCTTACCAAAGAAGAAAGGCTGAAGAAACTTTGCGAC +CTCTATGCAAAAGTTCTGGGTTCAAAAGAAGCTTTGAACCCCGTGCACTA +TGAAGAGAAGAACTGGTGCGAGGAGCAGTACTCGGCGGGCTGCTACACGA +CCTACTTCCCCCCTGGGATCATGACTCAGTATGGAAGGGTTCTACGCCAG +CCAGTCGGCAGGATTTATTTCGCCGGCACGGAGACTGCCACGCACTGGAG +TGGCTACATGGAGGGGGCCGTGGAGGCCGGAGAGAGAGCGGCCCGAGAGA +TCCTGCATGCTATGGGAAAGATCCCAGAAGATGAAATCTGGCAGTCTGAA +CCAGAGTCCGTGGATGTGCCTGCGAAGCCCATTACCACGACCTTCTTGGA +GAGACACTTGCCCTCGGTGCCCGGCCTGCTGAGGCTGATTGGATTGACCG +CCATCTTTTCAGCCACTGCTCTCGGCTACCTGGCCCACAAAAGGGGGCTA +CTCGTGCGGGTCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSSSCT00000032764_susscrofa.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSSSCT00000032764_susscrofa.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,10 @@ +>ENSSSCT00000032764_susscrofa +ATGGATGACATGGGAAAGAAGATTCCAGCTGATGCACCATGGGAGTCTCC +GCATGCAGAGGAATGGGATAAGATGACCATGAAAGATCTCATCGATAAAA +TCTGTTGGACAAAGACTGCTAAACGGTTTGCATCTCTCTTTGTAAATATC +AATGTGACCTCCGAACCCCACGAAGTGTCTGCCCTGTGGTTTTTGTGGTA +TGTGAAGCAGTGTGGAGGCACCACCCGGATATTCTCTGTTACCAACGGGG +GCCAGGAACGGAAGTTTGTAGGCGGATCTGGTCAAGTAAGCGAACGGATA +ATGCACCTCCTCGGGGACAGAGTGAAGCTGAGGTGTCCTGTCACCTATGT +TGACCAGTCAGGTGACAACATCATCGTAGAGACATTGAATCATGAACTTT +ATGAGTGCCAATACGTAATTAGTGCCATCCCTCCAACTCT |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSSSCT00000033745_susscrofa.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSSSCT00000033745_susscrofa.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,32 @@ +>ENSSSCT00000033745_susscrofa +ATGGCAGCGGCCAAACTTCTGCATGACTCTGGCCTGAGTGTGATTGTTCT +GGAAGCCCGGGACCGCGTGGGAGGCAGGACTTACACCGTCAGGAACCAAC +AAGTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACTCAGAAT +CGCATCTTAAGATTGTCCAAGGAGCTAGGATTGGAGACCTACAAAGTGAA +TGAAGTGGAGCGTCTGATTCACTATGTAAAGGGCAAATCCTACCCCTTCA +GGGGCCCATTACCACCTGTGAGGAATCCGATTACCTTCCTAGATCTTAAC +AACCTTTGGAGGACGGTGGATGACATGGGACGAGAGATTCCCAGTGATGC +CCCATGGAAGGCGCCCCTTGCAGAACAGTGGGACCAGATGACAATGAAGG +AGCTGTTGGACAAGCTCTGCTGGACTGAATCTTCGAAGCAGCTGGCCACC +CTTTTTGTGAACCTGTGTGTCACCGCGGAGACCCATGAGGTCTCTGCTCT +CTGGTTCCTGTGGTATGTGAAGCAGTGTGGAGGCACCACCAGGATCATCT +CAACAACTAACGGAGGGCAGGAGAGGAAATTTGTGGGCGGATCTGGTCAA +GTGACCGAGCGGATAAAGGACCTCCTTGGAGACCGAGTGAAGCTGGAGAG +GCCTGTGGTCCACATTGACCAGACAGGAGAAAATGTCCTCGTGGAGACCC +TAAACCACGAGGTGTACGAGGCTAAGTATGTGATTAGCGCCATTCCTCCT +GTCCTGGGCATGAAGATTCATTTCAGTCCCCCTCTGCCAATGATGAGAAA +CCAGCTCATCACTCGTGTACCTCTGGGCTCTGTCATCAAGTGTATAGTTT +ATTACAAAGAGCCCTTCTGGAGGCATAAGGATTACTGTGGAAGCATGATT +ATTGAAGGAGAGGAAGCTCCAATCGCCTACACGTTGGATGATTCCAAGCC +TGATGGCAGCTGTGCCGCCATCATAGGATTTATCCTTGCCCACAAAGCCA +GAAAACTGGCCCGTCTTACCAAAGAAGAAAGGCTGAAGAAACTTTGCGAC +CTCTATGCAAAAGTTCTGGGTTCAAAAGAAGCTTTGAACCCCGTGCACTA +TGAAGAGAAGAACTGGTGCGAGGAGCAGTACTCGGCGGGCTGCTACACGA +CCTACTTCCCCCCTGGGATCATGACTCAGTATGGAAGGGTTCTACGCCAG +CCAGTCGGCAGGATTTATTTCGCCGGCACGGAGACTGCCACGCACTGGAG +TGGCTACATGGAGGGGGCCGTGGAGGCCGGAGAGAGAGCGGCCCGAGAGA +TCCTGCATGCTATGGGAAAGATCCCAGAAGATGAAATCTGGCAGTCTGAA +CCAGAGTCCGTGGATGTGCCTGCGAAGCCCATTACCACGACCTTCTTGGA +GAGACACTTGCCCTCGGTGCCCGGCCTGCTGAGGCTGATTGGATTGACCG +CCATCTTTTCAGCCACTGCTCTCGGCTACCTGGCCCACAAAAGGGGGCTA +CTCGTGCGGGTCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENSSSCT00000035258_susscrofa.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENSSSCT00000035258_susscrofa.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,10 @@ +>ENSSSCT00000035258_susscrofa +TCGCTGCCCGCCATCATGGGCTTCATCCTTGCTCGAAAAGCTGACCGCCT +TGCTAAGGTTCATAAAGAAATAAGAAAGCGGAAAATCTGTGAGCTCTACG +CCAAAGTGCTAGGATCTCAAGAAGCTTTACATCCCGTGCACTATGAAGAG +AAGAACTGGTGTGAGGAGCAGTACTCGGGGGGCTGCTACACTGCCTACTT +CCCCCCTGGGATCATGACTCAGTATGGAAGGGTGATCCGCCAGCCCGTAG +GCAGGATATTCTTTGCTGGCACCGAGACTGCCACACAATGGAGCGGTTAC +ATGGAAGGAGCAGTAGAAGCCGGCGAACGGGCGGCTAGAGAGGATGTTCC +AGCTTTTGAGATCACCCGCACCTTCTGGGAGAGAAACCTGCCTTCCGTGA +CCGGGCTGCTTAAGATCATCGGATTTTCCA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000302850_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000302850_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,84 @@ +>ENST00000302850_homosapiens +ATGGCCACCGGGGGCCGGCGGGGGGCGGCGGCCGCGCCGCTGCTGGTGGC +GGTGGCCGCGCTGCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGAGG +TGTGTCCCGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTG +GAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAA +AACGAGGCCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGA +TCACTGATTACTTGCTGCTCTTCCGGGTCTATGGGCTCGAGAGCCTGAAG +GACCTGTTCCCCAACCTCACGGTCATCCGGGGATCACGACTGTTCTTTAA +CTACGCGCTGGTCATCTTCGAGATGGTTCACCTCAAGGAACTCGGCCTCT +ACAACCTGATGAACATCACCCGGGGTTCTGTCCGCATCGAGAAGAACAAT +GAGCTCTGTTACTTGGCCACTATCGACTGGTCCCGTATCCTGGATTCCGT +GGAGGATAATTACATCGTGTTGAACAAAGATGACAACGAGGAGTGTGGAG +ACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTC +ATCAACGGGCAGTTTGTCGAACGATGTTGGACTCATAGTCACTGCCAGAA +AGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCT +GTTGCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACC +AAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGAC +CTGCCCGCCCCCGTACTACCACTTCCAGGACTGGCGCTGTGTGAACTTCA +GCTTCTGCCAGGACCTGCACCACAAATGCAAGAACTCGCGGAGGCAGGGC +TGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTC +CGGGTACACGATGAATTCCAGCAACTTGCTGTGCACCCCATGCCTGGGTC +CCTGTCCCAAGGTGTGCCACCTCCTAGAAGGCGAGAAGACCATCGACTCG +GTGACGTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCT +GATCATCAACATTCGAGGAGGCAACAATCTGGCAGCTGAGCTAGAAGCCA +ACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGATCC +TACGCTCTGGTGTCACTTTCCTTCTTCCGGAAGTTACGTCTGATTCGAGG +AGAGACCTTGGAAATTGGGAACTACTCCTTCTATGCCTTGGACAACCAGA +ACCTAAGGCAGCTCTGGGACTGGAGCAAACACAACCTCACCATCACTCAG +GGGAAACTCTTCTTCCACTATAACCCCAAACTCTGCTTGTCAGAAATCCA +CAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACA +TTGCCCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAATGAGTTACTT +AAATTTTCTTACATTCGGACATCTTTTGACAAGATCTTGCTGAGATGGGA +GCCGTACTGGCCCCCCGACTTCCGAGACCTCTTGGGGTTCATGCTGTTCT +ACAAAGAGGCCCCTTATCAGAATGTGACGGAGTTCGACGGGCAGGATGCG +TGTGGTTCCAACAGTTGGACGGTGGTAGACATTGACCCACCCCTGAGGTC +CAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTCA +AGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTTTTCG +GATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGAC +AGATGCCACCAACCCCTCTGTGCCCCTGGATCCAATCTCAGTGTCTAACT +CATCATCCCAGATTATTCTGAAGTGGAAACCACCCTCCGACCCCAATGGC +AACATCACCCACTACCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA +GCTGTTCGAGCTGGATTATTGCCTCAAAGGGCTGAAGCTGCCCTCGAGGA +CCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGT +GAGTATGAGGATTCGGCCGGCGAATGCTGCTCCTGTCCAAAGACAGACTC +TCAGATCCTGAAGGAGCTGGAGGAGTCCTCGTTTAGGAAGACGTTTGAGG +ATTACCTGCACAACGTGGTTTTCGTCCCCAGAAAAACCTCTTCAGGCACT +GGTGCCGAGGACCCTAGGCCATCTCGGAAACGCAGGTCCCTTGGCGATGT +TGGGAATGTGACGGTGGCCGTGCCCACGGTGGCAGCTTTCCCCAACACTT +CCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACAGGCCTTTTGAGAAG +GTGGTGAACAAGGAGTCGCTGGTCATCTCCGGCTTGCGACACTTCACGGG +CTATCGCATCGAGCTGCAGGCTTGCAACCAGGACACCCCTGAGGAACGGT +GCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGCCTGAAGCCAAGGCT +GATGACATTGTTGGCCCTGTGACGCATGAAATCTTTGAGAACAACGTCGT +CCACTTGATGTGGCAGGAGCCGAAGGAGCCCAATGGTCTGATCGTGCTGT +ATGAAGTGAGTTATCGGCGATATGGTGATGAGGAGCTGCATCTCTGCGTC +TCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGGCTGCGTGGGCTGTC +ACCGGGGAACTACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGCAACG +GCTCTTGGACGGAACCCACCTATTTCTACGTGACAGACTATTTAGACGTC +CCGTCAAATATTGCAAAAATTATCATCGGCCCCCTCATCTTTGTCTTTCT +CTTCAGTGTTGTGATTGGAAGTATTTATCTATTCCTGAGAAAGAGGCAGC +CAGATGGGCCGCTGGGACCGCTTTACGCTTCTTCAAACCCTGAGTATCTC +AGTGCCAGTGATGTGTTTCCATGCTCTGTGTACGTGCCGGACGAGTGGGA +GGTGTCTCGAGAGAAGATCACCCTCCTTCGAGAGCTGGGGCAGGGCTCCT +TCGGCATGGTGTATGAGGGCAATGCCAGGGACATCATCAAGGGTGAGGCA +GAGACCCGCGTGGCGGTGAAGACGGTCAACGAGTCAGCCAGTCTCCGAGA +GCGGATTGAGTTCCTCAATGAGGCCTCGGTCATGAAGGGCTTCACCTGCC +ATCACGTGGTGCGCCTCCTGGGAGTGGTGTCCAAGGGCCAGCCCACGCTG +GTGGTGATGGAGCTGATGGCTCACGGAGACCTGAAGAGCTACCTCCGTTC +TCTGCGGCCAGAGGCTGAGAATAATCCTGGCCGCCCTCCCCCTACCCTTC +AAGAGATGATTCAGATGGCGGCAGAGATTGCTGACGGGATGGCCTACCTG +AACGCCAAGAAGTTTGTGCATCGGGACCTGGCAGCGAGAAACTGCATGGT +CGCCCATGATTTTACTGTCAAAATTGGAGACTTTGGAATGACCAGAGACA +TCTATGAAACGGATTACTACCGGAAAGGGGGCAAGGGTCTGCTCCCTGTA +CGGTGGATGGCACCGGAGTCCCTGAAGGATGGGGTCTTCACCACTTCTTC +TGACATGTGGTCCTTTGGCGTGGTCCTTTGGGAAATCACCAGCTTGGCAG +AACAGCCTTACCAAGGCCTGTCTAATGAACAGGTGTTGAAATTTGTCATG +GATGGAGGGTATCTGGATCAACCCGACAACTGTCCAGAGAGAGTCACTGA +CCTCATGCGCATGTGCTGGCAATTCAACCCCAAGATGAGGCCAACCTTCC +TGGAGATTGTCAACCTGCTCAAGGACGACCTGCACCCCAGCTTTCCAGAG +GTGTCGTTCTTCCACAGCGAGGAGAACAAGGCTCCCGAGAGTGAGGAGCT +GGAGATGGAGTTTGAGGACATGGAGAATGTGCCCCTGGACCGTTCCTCGC +ACTGTCAGAGGGAGGAGGCGGGGGGCCGGGATGGAGGGTCCTCGCTGGGT +TTCAAGCGGAGCTACGAGGAACACATCCCTTACACACACATGAACGGAGG +CAAGAAAAACGGGCGGATTCTGACCTTGCCTCGGTCCAATCCTTCCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000338702_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000338702_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENST00000338702_homosapiens +ATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGT +CGTGATCGGAGGTGGCATTTCAGGACTATCTGCTGCCAAACTCTTGACTG +AATATGGCGTTAGTGTTTTGGTTTTAGAAGCTCGGGACAGGGTTGGAGGA +AGAACATATACTATAAGGAATGAGCATGTTGATTACGTAGATGTTGGTGG +AGCTTATGTGGGACCAACCCAAAACAGAATCTTACGCTTGTCTAAGGAGC +TGGGCATAGAGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTCAATAT +GTCAAGGGGAAAACATATCCATTTCGGGGCGCCTTTCCACCAGTATGGAA +TCCCATTGCATATTTGGATTACAATAATCTGTGGAGGACAATAGATAACA +TGGGGAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGAC +AAATGGGACAAAATGACCATGAAAGAGCTCATTGACAAAATCTGCTGGAC +AAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATCAATGTGACCT +CTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCAG +TGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGTGGCCAGGAACG +GAAGTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTCC +TCGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTCA +AGTGACAACATCATCATAGAGACGCTGAACCATGAACATTATGAGTGCAA +ATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAGATTCACTTCA +GACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGGCTTCCAATG +GGAGCTGTCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGAA +GAAGGATTACTGTGGCTGCATGATCATTGAAGATGAAGATGCTCCAATTT +CAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCATG +GGCTTCATTCTTGCCCGGAAAGCTGATCGACTTGCTAAGCTACATAAGGA +AATAAGGAAGAAGAAAATCTGTGAGCTCTATGCCAAAGTGCTGGGATCCC +AAGAAGCTTTACATCCAGTGCATTATGAAGAGAAGAACTGGTGTGAGGAG +CAGTACTCTGGGGGCTGCTACACGGCCTACTTCCCTCCTGGGATCATGAC +TCAATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGG +GCACAGAGACTGCCACAAAGTGGAGCGGCTACATGGAAGGGGCAGTTGAG +GCTGGAGAACGAGCAGCTAGGGAGGTCTTAAATGGTCTCGGGAAGGTGAC +CGAGAAAGATATCTGGGTACAAGAACCTGAATCAAAGGACGTTCCAGCGG +TAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGGC +CTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTGT +GCTGTACAAATACAAGCTCCTGCCACGGTCTTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000340611_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000340611_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,51 @@ +>ENST00000340611_homosapiens +ATGGACCCAGAATGCGCCCAGCTGCTCCCGGCTCTCTGTGCTGTTCTGGT +AGATCCCAGGCAGCCGGTGGCAGATGACACCTGTTTGGAGAAGCTCCTGG +ACTGGTTTAAAACGGTCACTGAAGGAGAGTCCAGTGTCGTGCTGCTGCAG +GAGCACCCCTGCCTGGTGGAGCTGCTGTCCCATGTGCTGAAAGTCCAGGA +CCTGAGTTCTGGGGTCCTCTCCTTCTCACTGCGCCTGGCAGGAACCTTCG +CAGCCCAGGAAAACTGCTTCCAGTATCTTCAGCAGGGGGAGTTACTACCA +GGGCTCTTTGGGGAGCCAGGACCCCTCGGCCGAGCAACCTGGGCCGTCCC +CACCGTGCGCAGCGGCTGGATCCAGGGCCTGCGCTCCCTGGCACAGCACC +CCAGCGCCCTGCGCTTCCTGGCCGACCATGGTGCGGTCGACACCATCTTC +TCCCTGCAGGGAGACTCCAGCCTGTTTGTGGCCTCGGCGGCCAGTCAGCT +CCTGGTGCACGTCCTGGCTTTGTCCATGCGAGGTGGAGCCGAGGGGCAGC +CCTGCCTGCCGGGGGGTGACTGGCCCGCGTGTGCCCAGAAGATCATGGAT +CACGTTGAAGAGTCCTTGTGCTCCGCGGCCACCCCCAAGGTCACTCAGGC +CCTGAACGTCCTGACCACGACCTTCGGGCGCTGCCAGAGCCCCTGGACGG +AAGCCCTGTGGGTGCGGCTGAGTCCCCGCGTGGCCTGTCTGCTGGAGAGA +GACCCCATCCCCGCCGCACACTCGTTCGTGGACCTGCTTCTCTGTGTGGC +TCGTTCTCCCGTGTTCAGTTCTTCCGACGGCAGCCTGTGGGAGACAGTGG +CGCGGGCTCTGAGCTGCCTGGGTCCCACCCACATGGGACCCCTGGCTTTG +GGGATCCTGAAGCTCGAGCACTGTCCACAGGCACTGAGGACCCAGGCCTT +CCAGGTCCTTCTCCAGCCCCTGGCCTGTGTCCTGAAGGCCACGGTTCAGG +CCCCCGGACCCCCAGGCTTGCTGGACGGGACGGCAGACGATGCCACGACG +GTGGACACACTCCTGGCCTCCAAGTCGTCCTGCGCCGGCCTCCTGTGCCG +CACCCTGGCTCACCTGGAGGAGCTGCAGCCGCTGCCCCAGCGCCCTTCAC +CGTGGCCCCAGGCGTCTCTACTGGGGGCTACAGTGACTGTCCTGCGGCTC +TGTGACGGCTCGGCTGCCCCTGCCTCCAGTGTGGGGGGCCACCTCTGTGG +GACCCTGGCGGGCTGCGTCCGGGTCCAGCGAGCAGCCCTCGACTTCCTGG +GGACGCTGTCACAGGGGACAGGCCCCCAGGAGCTGGTGACGCAGGCGCTT +GCTGTCCTCCTGGAGTGCCTCGAGAGCCCCGGCTCCAGCCCCACGGTTCT +GAAGAAGGCCTTCCAGGCCACGCTCAGGTGGCTCCTGAGCTCACCCAAGA +CCCCCGGCTGCTCTGATCTCGGCCCCCTCATCCCGCAGTTCCTCAGAGAG +CTGTTCCCTGTGCTGCAGAAACGCCTGTGCCACCCCTGCTGGGAGGTGAG +GGACTCCGCCCTCGAGTTCCTGACCCAGCTGAGCAGGCACTGGGGAGGAC +AGGCTGACTTCAGATGCGCACTCTTGGCTTCAGAGGTGCCTCAGCTGGCC +CTGCAGCTCCTCCAGGACCCTGAGAGTTATGTCCGAGCGAGTGCAGTGAC +CGCCATGGGGCAGCTGTCCAGCCAGGGCCTGCACGCCCCCACCAGCCCTG +AGCATGCAGAGGCCCGGCAGAGCCTGTTCCTGGAGCTCCTGCACATCCTC +TCCGTAGACTCGGAGGGCTTCCCACGGCGGGCGGTCATGCAAGTCTTCAC +TGAGTGGCTGCGGGACGGCCACGCCGACGCGGCCCAGGACACGGAGCAGT +TCGTGGCCACTGTGCTGCAGGCGGCGAGCCGAGACCTGGACTGGGAGGTC +CGCGCCCAGGGCCTGGAGCTGGCCCTCGTGTTCCTGGGCCAGACTTTGGG +GCCGCCGCGTACCCACTGCCCCTATGCCGTGGCCCTACCCGAGGTGGCCC +CAGCCCAGCCACTCACCGAGGCACTGAGGGCTCTCTGCCACGTGGGGCTC +TTTGACTTCGCCTTTTGTGCCTTGTTTGACTGCGACCGCCCTGTGGCGCA +GAAGTCTTGTGACCTCCTTCTCTTCCTGAGGGACAAGATTGCTTCCTACA +GCAGCCTGCGGGAGGCCAGGGGCAGCCCCAACACTGCCTCCGCAGAGGCC +ACCCTGCCGAGGTGGCGGGCGGGTGAGCAGGCCCAGCCCCCAGGGGACCA +GGAGCCTGAGGCTGTGCTGGCCATGCTCAGGTCCCTAGACCTGGAGGGCC +TGCGGAGCACGCTGGCCGAGAGCAGCGACCACGTGGAAAAGAGTCCCCAG +TCCCTCCTGCAGGACATGCTGGCCACGGGAGGCTTCCTGCAGGGGGACGA +GGCCGACTGCTACTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000341500_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000341500_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,84 @@ +>ENST00000341500_homosapiens +ATGGCCACCGGGGGCCGGCGGGGGGCGGCGGCCGCGCCGCTGCTGGTGGC +GGTGGCCGCGCTGCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGAGG +TGTGTCCCGGCATGGATATCCGGAACAACCTCACTAGGTTGCATGAGCTG +GAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAA +AACGAGGCCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGA +TCACTGATTACTTGCTGCTCTTCCGGGTCTATGGGCTCGAGAGCCTGAAG +GACCTGTTCCCCAACCTCACGGTCATCCGGGGATCACGACTGTTCTTTAA +CTACGCGCTGGTCATCTTCGAGATGGTTCACCTCAAGGAACTCGGCCTCT +ACAACCTGATGAACATCACCCGGGGTTCTGTCCGCATCGAGAAGAACAAT +GAGCTCTGTTACTTGGCCACTATCGACTGGTCCCGTATCCTGGATTCCGT +GGAGGATAATTACATCGTGTTGAACAAAGATGACAACGAGGAGTGTGGAG +ACATCTGTCCGGGTACCGCGAAGGGCAAGACCAACTGCCCCGCCACCGTC +ATCAACGGGCAGTTTGTCGAACGATGTTGGACTCATAGTCACTGCCAGAA +AGTTTGCCCGACCATCTGTAAGTCACACGGCTGCACCGCCGAAGGCCTCT +GTTGCCACAGCGAGTGCCTGGGCAACTGTTCTCAGCCCGACGACCCCACC +AAGTGCGTGGCCTGCCGCAACTTCTACCTGGACGGCAGGTGTGTGGAGAC +CTGCCCGCCCCCGTACTACCACTTCCAGGACTGGCGCTGTGTGAACTTCA +GCTTCTGCCAGGACCTGCACCACAAATGCAAGAACTCGCGGAGGCAGGGC +TGCCACCAGTACGTCATTCACAACAACAAGTGCATCCCTGAGTGTCCCTC +CGGGTACACGATGAATTCCAGCAACTTGCTGTGCACCCCATGCCTGGGTC +CCTGTCCCAAGGTGTGCCACCTCCTAGAAGGCGAGAAGACCATCGACTCG +GTGACGTCTGCCCAGGAGCTCCGAGGATGCACCGTCATCAACGGGAGTCT +GATCATCAACATTCGAGGAGGCAACAATCTGGCAGCTGAGCTAGAAGCCA +ACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGATCC +TACGCTCTGGTGTCACTTTCCTTCTTCCGGAAGTTACGTCTGATTCGAGG +AGAGACCTTGGAAATTGGGAACTACTCCTTCTATGCCTTGGACAACCAGA +ACCTAAGGCAGCTCTGGGACTGGAGCAAACACAACCTCACCATCACTCAG +GGGAAACTCTTCTTCCACTATAACCCCAAACTCTGCTTGTCAGAAATCCA +CAAGATGGAAGAAGTTTCAGGAACCAAGGGGCGCCAGGAGAGAAACGACA +TTGCCCTGAAGACCAATGGGGACCAGGCATCCTGTGAAAATGAGTTACTT +AAATTTTCTTACATTCGGACATCTTTTGACAAGATCTTGCTGAGATGGGA +GCCGTACTGGCCCCCCGACTTCCGAGACCTCTTGGGGTTCATGCTGTTCT +ACAAAGAGGCCCCTTATCAGAATGTGACGGAGTTCGACGGGCAGGATGCG +TGTGGTTCCAACAGTTGGACGGTGGTAGACATTGACCCACCCCTGAGGTC +CAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTCA +AGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTTTTCG +GATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGAC +AGATGCCACCAACCCCTCTGTGCCCCTGGATCCAATCTCAGTGTCTAACT +CATCATCCCAGATTATTCTGAAGTGGAAACCACCCTCCGACCCCAATGGC +AACATCACCCACTACCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTGA +GCTGTTCGAGCTGGATTATTGCCTCAAAGGGCTGAAGCTGCCCTCGAGGA +CCTGGTCTCCACCATTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGT +GAGTATGAGGATTCGGCCGGCGAATGCTGCTCCTGTCCAAAGACAGACTC +TCAGATCCTGAAGGAGCTGGAGGAGTCCTCGTTTAGGAAGACGTTTGAGG +ATTACCTGCACAACGTGGTTTTCGTCCCCAGGCCATCTCGGAAACGCAGG +TCCCTTGGCGATGTTGGGAATGTGACGGTGGCCGTGCCCACGGTGGCAGC +TTTCCCCAACACTTCCTCGACCAGCGTGCCCACGAGTCCGGAGGAGCACA +GGCCTTTTGAGAAGGTGGTGAACAAGGAGTCGCTGGTCATCTCCGGCTTG +CGACACTTCACGGGCTATCGCATCGAGCTGCAGGCTTGCAACCAGGACAC +CCCTGAGGAACGGTGCAGTGTGGCAGCCTACGTCAGTGCGAGGACCATGC +CTGAAGCCAAGGCTGATGACATTGTTGGCCCTGTGACGCATGAAATCTTT +GAGAACAACGTCGTCCACTTGATGTGGCAGGAGCCGAAGGAGCCCAATGG +TCTGATCGTGCTGTATGAAGTGAGTTATCGGCGATATGGTGATGAGGAGC +TGCATCTCTGCGTCTCCCGCAAGCACTTCGCTCTGGAACGGGGCTGCAGG +CTGCGTGGGCTGTCACCGGGGAACTACAGCGTGCGAATCCGGGCCACCTC +CCTTGCGGGCAACGGCTCTTGGACGGAACCCACCTATTTCTACGTGACAG +ACTATTTAGACGTCCCGTCAAATATTGCAAAAATTATCATCGGCCCCCTC +ATCTTTGTCTTTCTCTTCAGTGTTGTGATTGGAAGTATTTATCTATTCCT +GAGAAAGAGGCAGCCAGATGGGCCGCTGGGACCGCTTTACGCTTCTTCAA +ACCCTGAGTATCTCAGTGCCAGTGATGTGTTTCCATGCTCTGTGTACGTG +CCGGACGAGTGGGAGGTGTCTCGAGAGAAGATCACCCTCCTTCGAGAGCT +GGGGCAGGGCTCCTTCGGCATGGTGTATGAGGGCAATGCCAGGGACATCA +TCAAGGGTGAGGCAGAGACCCGCGTGGCGGTGAAGACGGTCAACGAGTCA +GCCAGTCTCCGAGAGCGGATTGAGTTCCTCAATGAGGCCTCGGTCATGAA +GGGCTTCACCTGCCATCACGTGGTGCGCCTCCTGGGAGTGGTGTCCAAGG +GCCAGCCCACGCTGGTGGTGATGGAGCTGATGGCTCACGGAGACCTGAAG +AGCTACCTCCGTTCTCTGCGGCCAGAGGCTGAGAATAATCCTGGCCGCCC +TCCCCCTACCCTTCAAGAGATGATTCAGATGGCGGCAGAGATTGCTGACG +GGATGGCCTACCTGAACGCCAAGAAGTTTGTGCATCGGGACCTGGCAGCG +AGAAACTGCATGGTCGCCCATGATTTTACTGTCAAAATTGGAGACTTTGG +AATGACCAGAGACATCTATGAAACGGATTACTACCGGAAAGGGGGCAAGG +GTCTGCTCCCTGTACGGTGGATGGCACCGGAGTCCCTGAAGGATGGGGTC +TTCACCACTTCTTCTGACATGTGGTCCTTTGGCGTGGTCCTTTGGGAAAT +CACCAGCTTGGCAGAACAGCCTTACCAAGGCCTGTCTAATGAACAGGTGT +TGAAATTTGTCATGGATGGAGGGTATCTGGATCAACCCGACAACTGTCCA +GAGAGAGTCACTGACCTCATGCGCATGTGCTGGCAATTCAACCCCAAGAT +GAGGCCAACCTTCCTGGAGATTGTCAACCTGCTCAAGGACGACCTGCACC +CCAGCTTTCCAGAGGTGTCGTTCTTCCACAGCGAGGAGAACAAGGCTCCC +GAGAGTGAGGAGCTGGAGATGGAGTTTGAGGACATGGAGAATGTGCCCCT +GGACCGTTCCTCGCACTGTCAGAGGGAGGAGGCGGGGGGCCGGGATGGAG +GGTCCTCGCTGGGTTTCAAGCGGAGCTACGAGGAACACATCCCTTACACA +CACATGAACGGAGGCAAGAAAAACGGGCGGATTCTGACCTTGCCTCGGTC +CAATCCTTCCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000378069_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000378069_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,33 @@ +>ENST00000378069_homosapiens +ATGAGCAACAAATGCGACGTGGTCGTGGTGGGGGGCGGCATCTCAGGTAT +GGCAGCAGCCAAACTTCTGCATGACTCTGGACTGAATGTGGTTGTTCTGG +AAGCCCGGGACCGTGTGGGAGGCAGGACTTACACTCTTAGGAACCAAAAG +GTTAAATATGTGGACCTTGGAGGATCCTATGTTGGACCAACCCAGAATCG +TATCTTGAGATTAGCCAAGGAGCTAGGATTGGAGACCTACAAAGTGAATG +AGGTTGAGCGTCTGATCCACCATGTAAAGGGCAAATCATACCCCTTCAGG +GGGCCATTCCCACCTGTATGGAATCCAATTACCTACTTAGATCATAACAA +CTTTTGGAGGACAATGGATGACATGGGGCGAGAGATTCCGAGTGATGCCC +CATGGAAGGCTCCCCTTGCAGAAGAGTGGGACAACATGACAATGAAGGAG +CTACTGGACAAGCTCTGCTGGACTGAATCTGCAAAGCAGCTTGCCACTCT +CTTTGTGAACCTGTGTGTCACTGCAGAGACCCATGAGGTCTCTGCTCTCT +GGTTCCTGTGGTATGTGAAGCAGTGTGGAGGCACAACAAGAATCATCTCG +ACAACAAATGGAGGACAGGAGAGGAAATTTGTGGGCGGATCTGGTCAAGT +GAGTGAGCGGATAATGGACCTCCTTGGAGACCGAGTGAAGCTGGAGAGGC +CTGTGATCTACATTGACCAGACAAGAGAAAATGTCCTTGTGGAGACCCTA +AACCATGAGATGTATGAGGCTAAATATGTGATTAGTGCTATTCCTCCTAC +TCTGGGCATGAAGATTCACTTCAATCCCCCTCTGCCAATGATGAGAAACC +AGATGATCACTCGTGTGCCTTTGGGTTCAGTCATCAAGTGTATAGTTTAT +TATAAAGAGCCTTTCTGGAGGAAAAAGGATTACTGTGGAACCATGATTAT +TGATGGAGAAGAAGCTCCAGTTGCCTACACGTTGGATGATACCAAACCTG +AAGGCAACTATGCTGCCATAATGGGATTTATCCTGGCCCACAAAGCCAGA +AAACTGGCACGTCTTACCAAAGAGGAAAGGTTGAAGAAACTTTGTGAACT +CTATGCCAAGGTTCTGGGTTCCCTAGAAGCTCTGGAGCCAGTGCATTATG +AAGAAAAGAACTGGTGTGAGGAGCAGTACTCTGGGGGCTGCTACACAACT +TATTTCCCCCCTGGGATCCTGACTCAATATGGAAGGGTTCTACGCCAGCC +AGTGGACAGGATTTACTTTGCAGGCACCGAGACTGCCACACACTGGAGCG +GCTACATGGAGGGGGCTGTAGAGGCCGGGGAGAGAGCAGCCCGAGAGATC +CTGCATGCCATGGGGAAGATTCCAGAGGATGAAATCTGGCAGTCAGAACC +AGAGTCTGTGGATGTCCCTGCACAGCCCATCACCACCACCTTTTTGGAGA +GACATTTGCCCTCCGTGCCAGGCCTGCTCAGGCTGATTGGATTGACCACC +ATCTTTTCAGCAACGGCTCTTGGCTTCCTGGCCCACAAAAGGGGGCTACT +TGTGAGAGTCTAA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000421712_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000421712_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,12 @@ +>ENST00000421712_homosapiens +ATGGACCCAGAATGCGCCCAGCTGCTCCCGGCTCTCTGTGCTGTTCTGGT +AGATCCCAGGCAGCCGGTGGCAGATGACACCTGTTTGGAGAAGCTCCTGG +ACTGGTTTAAAACGGTCACTGAAGGAGAGTCCAGTGTCGTGCTGCTGCAG +GAGCACCCCTGCCTGGTGGAGCTGCTGTCCCATGTGCTGAAAGTCCAGGA +CCTGAGTTCTGGGGTCCTCTCCTTCTCACTGCGCCTGGCAGGAACCTTCG +CAGCCCAGGAAAACTGCTTCCAGTATCTTCAGGTGCGGTCGACACCATCT +TCTCCCTGCAGGGAGACTCCAGCCTGTTTGTGGCCTCGGCGGCCAGTCAG +CTCCTGGTGCACGTCCTGGCTTTGTCCATGCGAGGTGGAGCCGAGGGGCA +GCCCTGCCTGCCGGGGGGTGACTGGCCCGCGTGTGCCCAGAAGATCATGG +ATCACGTTGAAGAGTCCTTGTGCTCCGCGGCCACCCCCAAGGTCACTCAG +GCCCTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000542639_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000542639_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,25 @@ +>ENST00000542639_homosapiens +ATGGGGAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGA +CAAATGGGACAAAATGACCATGAAAGAGCTCATTGACAAAATCTGCTGGA +CAAAGACTGCTAGGCGGTTTGCTTATCTTTTTGTGAATATCAATGTGACC +TCTGAGCCTCACGAAGTGTCTGCCCTGTGGTTCTTGTGGTATGTGAAGCA +GTGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGTGGCCAGGAAC +GGAAGTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATAATGGACCTC +CTCGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTC +AAGTGACAACATCATCATAGAGACGCTGAACCATGAACATTATGAGTGCA +AATACGTAATTAATGCGATCCCTCCGACCTTGACTGCCAAGATTCACTTC +AGACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGGCTTCCAAT +GGGAGCTGTCATTAAGTGCATGATGTATTACAAGGAGGCCTTCTGGAAGA +AGAAGGATTACTGTGGCTGCATGATCATTGAAGATGAAGATGCTCCAATT +TCAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCAT +GGGCTTCATTCTTGCCCGGAAAGCTGATCGACTTGCTAAGCTACATAAGG +AAATAAGGAAGAAGAAAATCTGTGAGCTCTATGCCAAAGTGCTGGGATCC +CAAGAAGCTTTACATCCAGTGCATTATGAAGAGAAGAACTGGTGTGAGGA +GCAGTACTCTGGGGGCTGCTACACGGCCTACTTCCCTCCTGGGATCATGA +CTCAATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCG +GGCACAGAGACTGCCACAAAGTGGAGCGGCTACATGGAAGGGGCAGTTGA +GGCTGGAGAACGAGCAGCTAGGGAGGTCTTAAATGGTCTCGGGAAGGTGA +CCGAGAAAGATATCTGGGTACAAGAACCTGAATCAAAGGACGTTCCAGCG +GTAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGG +CCTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTG +TGCTGTACAAATACAAGCTCCTGCCACGGTCTTGA |
| b |
| diff -r 000000000000 -r dc36d50254d8 test-data/ENST00000600492_homosapiens.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ENST00000600492_homosapiens.fa Wed Sep 13 17:53:57 2017 -0400 |
| b |
| @@ -0,0 +1,11 @@ +>ENST00000600492_homosapiens +TACAAAGAGGCCCCTTATCAGAATGTGACGGAGTTCGACGGGCAGGATGC +GTGTGGTTCCAACAGTTGGACGGTGGTAGACATTGACCCACCCCTGAGGT +CCAACGACCCCAAATCACAGAACCACCCAGGGTGGCTGATGCGGGGTCTC +AAGCCCTGGACCCAGTATGCCATCTTTGTGAAGACCCTGGTCACCTTTTC +GGATGAACGCCGGACCTATGGGGCCAAGAGTGACATCATTTATGTCCAGA +CAGATGCCACCAACCCCTCTGTGCCCCTGGATCCAATCTCAGTGTCTAAC +TCATCATCCCAGATTATTCTGAAGTGGAAACCACCCTCCGACCCCAATGG +CAACATCACCCACTACCTGGTTTTCTGGGAGAGGCAGGCGGAAGACAGTG +AGCTGTTCGAGCTGGATTATTGCCTCAAAGGGCGAGTCCAGTCATCAGCT +CCGCTGTAA |