Repository 'marea'
hg clone https://toolshed.g2.bx.psu.edu/repos/bimib/marea

Changeset 57:dcb817af5d81 (2020-03-15)
Previous changeset 56:68375ead0ee4 (2020-03-15) Next changeset 58:959a9cb7816a (2020-03-15)
Commit message:
Uploaded
modified:
Marea/marea.xml
b
diff -r 68375ead0ee4 -r dcb817af5d81 Marea/marea.xml
--- a/Marea/marea.xml Sun Mar 15 11:28:47 2020 -0400
+++ b/Marea/marea.xml Sun Mar 15 11:29:01 2020 -0400
b
@@ -1,4 +1,4 @@
-<tool id="MaREA" name="Metabolic Reaction Enrichment Analysis" version="1.0.9">
+<tool id="MaREA" name="Metabolic Reaction Enrichment Analysis" version="1.1.0">
  <macros>
  <import>marea_macros.xml</import>
  </macros>
@@ -30,7 +30,6 @@
             --comparison ${cond.comparis.comparison}
             #if $cond.advanced.cond_map == 'true':
              --custom_rules true
-             --custom_rule ${cond.advanced.cond_map.custom_rule}
              --custom_map ${cond.advanced.cond_map.custom_map}
             #end if
             #if $cond.advanced.choice == 'true':
@@ -54,7 +53,6 @@
             #end if
             #if $cond.advanced.cond_map == 'true':
              --custom_rules true
-             --custom_rule ${cond.advanced.cond_map.custom_rule}
              --custom_map ${cond.advanced.cond_map.custom_map}
             #end if
             #if $cond.advanced.choice == 'true':
@@ -140,8 +138,7 @@
  <option value="false" selected="true">No</option>
  <option value="true">Yes</option>
  </param>
- <when value="true">
- <param name="Custom_rule" argument="--custom_rule" type="data" format="tabular, csv, tsv, xml" label="Custom rules" />
+ <when value="true">
  <param name="Custom_map" argument="--custom_map" type="data" format="xml, svg" label="custom-map.svg"/>
  </when>
  </conditional>