Repository 'intarna'
hg clone https://toolshed.g2.bx.psu.edu/repos/rnateam/intarna

Changeset 4:e1d64afef3ba (2018-03-23)
Previous changeset 3:03c09b961567 (2017-10-18) Next changeset 5:233dfabc8592 (2018-04-10)
Commit message:
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/intarna commit 6a688af07eb65f08922cf59dabcbc1b16277db8c
modified:
intarna.xml
test-data/intarna_result.tabular
b
diff -r 03c09b961567 -r e1d64afef3ba intarna.xml
--- a/intarna.xml Wed Oct 18 16:13:53 2017 -0400
+++ b/intarna.xml Fri Mar 23 17:55:25 2018 -0400
b
@@ -1,4 +1,4 @@
-<tool id="intarna" name="IntaRNA" version="2.1.0">
+<tool id="intarna" name="IntaRNA" version="2.1.0.1">
     <description>Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites.</description>
     <macros>
         <macro name="query_macro">
@@ -84,7 +84,7 @@
         </macro>
     </macros>
     <requirements>
-        <requirement type="package" version="2.0.4">intarna</requirement>
+        <requirement type="package" version="2.1.0">intarna</requirement>
     </requirements>
     <stdio>
         <exit_code range="1:" level="fatal" description="Error occurred. Please check Tool Standard Error" />
b
diff -r 03c09b961567 -r e1d64afef3ba test-data/intarna_result.tabular
--- a/test-data/intarna_result.tabular Wed Oct 18 16:13:53 2017 -0400
+++ b/test-data/intarna_result.tabular Fri Mar 23 17:55:25 2018 -0400
b
@@ -1,5 +1,5 @@
 id1 start1 end1 id2 start2 end2 subseqDP hybridDP E
-mRNA1 85 95 ncRNA1 21 32 GUGGUGAGGAG&CUCCUCACACAC (((((((((((&)))))))).))) -11.8782
-mRNA1 127 135 ncRNA2 18 25 GGCACCUGC&GCAGGGCC (((.(((((&)))))))) -6.95474
-mRNA2 86 97 ncRNA1 20 31 UGUGUGACGAGU&ACUCCUCACACA (((((((.((((&)))).))))))) -8.16661
-mRNA2 15 18 ncRNA2 22 25 GGCC&GGCC ((((&)))) -4.99627
+mRNA1 85 95 ncRNA1 21 32 GUGGUGAGGAG&CUCCUCACACAC (((((((((((&)))))))).))) -12.0345
+mRNA1 127 135 ncRNA2 18 25 GGCACCUGC&GCAGGGCC (((.(((((&)))))))) -7.20671
+mRNA2 86 97 ncRNA1 20 31 UGUGUGACGAGU&ACUCCUCACACA (((((((.((((&)))).))))))) -8.33678
+mRNA2 15 18 ncRNA2 22 25 GGCC&GGCC ((((&)))) -5.12558