Repository 'argalaxy_tools'
hg clone https://toolshed.g2.bx.psu.edu/repos/davidvanzessen/argalaxy_tools

Changeset 23:e2fbdfacec1d (2017-01-27)
Previous changeset 22:c28da767799f (2017-01-27) Next changeset 24:d5d203d38c8a (2017-02-01)
Commit message:
Uploaded
modified:
report_clonality/r_wrapper.sh
b
diff -r c28da767799f -r e2fbdfacec1d report_clonality/r_wrapper.sh
--- a/report_clonality/r_wrapper.sh Fri Jan 27 04:24:41 2017 -0500
+++ b/report_clonality/r_wrapper.sh Fri Jan 27 04:29:43 2017 -0500
b
@@ -262,7 +262,7 @@
  echo "<div class='tabbertab' title='$sample'>" >> $outputFile
  echo "Lymphclon clonality score: <br />$clonalityScore<br /><br />" >> $outputFile
  echo "<table border = 1>" >> $outputFile
- while IFS=, read type count
+ while read type count
  do
  echo "<tr><td>$type</td><td>$count</td></tr>" >> $outputFile
  done < $outputDir/lymphclon_coincidences_$sample.txt