| Previous changeset 1:e01203c34ce6 (2013-01-16) Next changeset 3:4d4415bcea3c (2013-01-16) |
|
Commit message:
Deleted selected files |
|
removed:
mm9refGene.txt |
| b |
| diff -r e01203c34ce6 -r e813f7743ea3 mm9refGene.txt --- a/mm9refGene.txt Wed Jan 16 18:18:26 2013 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| b'@@ -1,29211 +0,0 @@\n-23\tNM_001042489\tchr5\t+\t122659745\t122692306\t122666351\t122690681\t8\t122659745,122660350,122666240,122683428,122687689,122688414,122690222,122690615,\t122659930,122660401,122666372,122683701,122687794,122688646,122690335,122692306,\t0\tHvcn1\tcmpl\tcmpl\t-1,-1,0,0,0,0,1,0,\n-1669\tNM_001083312\tchr3\t+\t142193301\t142213047\t142197486\t142209538\t11\t142193301,142197480,142199260,142200975,142201685,142204319,142205812,142206885,142208413,142208825,142209283,\t142193403,142197676,142199388,142201085,142201882,142204565,142206093,142207098,142208516,142209019,142213047,\t0\tGbp7\tcmpl\tcmpl\t-1,0,1,0,2,1,1,0,0,1,0,\n-774\tNM_001162485\tchr2\t-\t24780871\t24790801\t24781125\t24790665\t8\t24780871,24781275,24781791,24782064,24782397,24782645,24783248,24790547,\t24781196,24781714,24781968,24782247,24782552,24782696,24783359,24790801,\t0\tArrdc1\tcmpl\tcmpl\t1,0,0,0,1,1,1,0,\n-922\tNM_011729\tchr1\t+\t44204588\t44238105\t44204907\t44237927\t15\t44204588,44213781,44214988,44215649,44217821,44218654,44220721,44223653,44230182,44230756,44231006,44232683,44235018,44235991,44237375,\t44204995,44213957,44215104,44215736,44217882,44218798,44220929,44224727,44230424,44230876,44231220,44232828,44235219,44236076,44238105,\t0\tErcc5\tcmpl\tcmpl\t0,1,0,2,2,0,0,1,1,0,0,1,2,2,0,\n-621\tNR_033530\tchr1\t-\t4763278\t4775807\t4775807\t4775807\t4\t4763278,4767605,4772648,4775653,\t4764597,4767729,4772814,4775807,\t0\tMrpl15\tunk\tunk\t-1,-1,-1,-1,\n-125\tNM_001111052\tchr3\t+\t55265679\t55342990\t55265985\t55337549\t14\t55265679,55266922,55281726,55284255,55291228,55291713,55293671,55303956,55306294,55306730,55310622,55320794,55325771,55337491,\t55266004,55267017,55281811,55284364,55291286,55291833,55293818,55304090,55306372,55306827,55310703,55320908,55325845,55342990,\t0\tDclk1\tcmpl\tcmpl\t0,1,0,1,2,0,0,0,2,2,0,0,0,2,\n-1731\tNM_001115085\tchr7\t+\t150255272\t150256992\t150255861\t150256815\t3\t150255272,150255659,150255840,\t150255418,150255725,150256992,\t0\tTssc4\tcmpl\tcmpl\t-1,-1,0,\n-1514\tNM_001115074\tchr1\t-\t121820095\t121891787\t121820095\t121891787\t23\t121820095,121822137,121824190,121827465,121829350,121830658,121831097,121832667,121833818,121842359,121844628,121846247,121847626,121850177,121850478,121850724,121852225,121858448,121878290,121881306,121881592,121886006,121891648,\t121820204,121822233,121824283,121827557,121829509,121830790,121831205,121832748,121833946,121842465,121844727,121846337,121847714,121850286,121850590,121850842,121852385,121858552,121878391,121881405,121881679,121886107,121891787,\t0\tGm101\tcmpl\tcmpl\t2,2,2,0,0,0,0,0,1,0,0,0,2,1,0,2,1,2,0,0,0,1,0,\n-651\tNM_001160220\tchr12\t+\t8681064\t8759389\t8704914\t8756526\t21\t8681064,8704896,8712738,8716127,8716964,8720165,8720649,8725793,8728470,8730852,8735439,8735661,8740078,8750566,8751142,8751420,8753962,8754916,8755203,8755566,8756394,\t8681286,8704965,8712847,8716315,8717131,8720436,8720743,8725919,8728613,8730985,8735583,8735955,8740315,8750834,8751272,8751549,8754100,8755042,8755325,8755759,8759389,\t0\tPum2\tcmpl\tcmpl\t-1,0,0,1,0,2,0,1,1,0,1,1,1,1,2,0,0,0,0,2,0,\n-1589\tNM_001166206\tchr2\t-\t131679413\t131685483\t131681570\t131682173\t2\t131679413,131685154,\t131682462,131685483,\t0\tErv3\tcmpl\tcmpl\t0,-1,\n-651\tNM_001160219\tchr12\t+\t8681064\t8759389\t8704914\t8756526\t21\t8681064,8704896,8712738,8716127,8716964,8720165,8720649,8725793,8728470,8730852,8735439,8735661,8740078,8750566,8751142,8751420,8753962,8754916,8755203,8755566,8756394,\t8681286,8704965,8712847,8716315,8717131,8720436,8720743,8725919,8728613,8730985,8735583,8735955,8740315,8750834,8751272,8751555,8754100,8755042,8755325,8755759,8759389,\t0\tPum2\tcmpl\tcmpl\t-1,0,0,1,0,2,0,1,1,0,1,1,1,1,2,0,0,0,0,2,0,\n-615\tNM_001085554\tchrX\t-\t3993613\t3995573\t3993991\t3995488\t1\t3993613,\t3995573,\t0\tGm10922\tcmpl\tcmpl\t0,\n-614\tNM_001085543\tchrX\t+\t3907010\t3908970\t3907095\t3908592\t1\t3907010,\t3908970,\t0\tGm14347\tcmpl\tcmpl\t0,\n-887\tNM_001164466\tchr15\t-\t39614242\t39689016\t39616143\t39688908\t10\t39614242,39616114,39624772,39655711,39658409,39659520,39673468,39675403,39678154,39688644,\t39614655,39616260,39624980,39655854,39658551,39659677,39673658,39675583,3967'..b'43L09\tunk\tunk\t-1,-1,-1,\n-1116\tNR_040765\tchr9\t+\t69608952\t69678006\t69678006\t69678006\t5\t69608952,69654593,69668885,69671325,69677487,\t69609019,69654711,69669624,69671517,69678006,\t0\tB230323A14Rik\tunk\tunk\t-1,-1,-1,-1,-1,\n-1260\tNR_040766\tchr9\t-\t88490162\t88494081\t88494081\t88494081\t5\t88490162,88493306,88493718,88493882,88494053,\t88493085,88493402,88493793,88493937,88494081,\t0\t9430037G07Rik\tunk\tunk\t-1,-1,-1,-1,-1,\n-161\tNR_040770\tchr9\t+\t92613553\t92690549\t92690549\t92690549\t5\t92613553,92668281,92676462,92678587,92689441,\t92613916,92668346,92676538,92678683,92690549,\t0\t4933400C23\tunk\tunk\t-1,-1,-1,-1,-1,\n-1293\tNR_040756\tchr9\t-\t92874753\t92900571\t92900571\t92900571\t4\t92874753,92875563,92898642,92900521,\t92875093,92875691,92898741,92900571,\t0\t1700034K08Rik\tunk\tunk\t-1,-1,-1,-1,\n-1347\tNR_040763\tchr9\t+\t99922718\t99935089\t99935089\t99935089\t3\t99922718,99924092,99934969,\t99923098,99924169,99935089,\t0\t4930519F24Rik\tunk\tunk\t-1,-1,-1,\n-1374\tNR_040764\tchr9\t+\t103459419\t103468221\t103468221\t103468221\t3\t103459419,103464701,103467941,\t103461825,103464780,103468221,\t0\t4932413F04Rik\tunk\tunk\t-1,-1,-1,\n-1450\tNR_040760\tchr9\t-\t113405863\t113496270\t113496270\t113496270\t5\t113405863,113408140,113410374,113431528,113496210,\t113407723,113408190,113410471,113431640,113496270,\t0\tAU023762\tunk\tunk\t-1,-1,-1,-1,-1,\n-1506\tNR_040753\tchr9\t-\t120833572\t120839920\t120839920\t120839920\t3\t120833572,120839487,120839877,\t120833814,120839785,120839920,\t0\t4930593C16Rik\tunk\tunk\t-1,-1,-1,\n-1456\tNR_040738\tchr9\t-\t114250228\t114273745\t114273745\t114273745\t6\t114250228,114258847,114264940,114271278,114272869,114273691,\t114250551,114259052,114265110,114271405,114272926,114273745,\t0\t4930525D18Rik\tunk\tunk\t-1,-1,-1,-1,-1,-1,\n-1092\tNM_183119\tchr13\t-\t66519049\t66542054\t66519180\t66541958\t5\t66519049,66519697,66534353,66534614,66541955,\t66519218,66519756,66534414,66534741,66542054,\t0\t2410141K09Rik\tcmpl\tcmpl\t1,2,1,0,0,\n-1348\tNM_001243285\tchrX\t+\t100104243\t100104990\t100104311\t100104905\t3\t100104243,100104526,100104838,\t100104347,100104690,100104990,\t0\t1700011M02Rik\tcmpl\tcmpl\t0,0,2,\n-626\tNM_001243307\tchr19\t-\t5453162\t5457563\t5456984\t5457397\t2\t5453162,5457339,\t5457184,5457563,\t0\tCcdc85b\tcmpl\tcmpl\t1,0,\n-626\tNM_198616\tchr19\t-\t5453162\t5457563\t5456788\t5457397\t1\t5453162,\t5457563,\t0\tCcdc85b\tcmpl\tcmpl\t0,\n-120\tNM_177139\tchr2\t+\t49921948\t50049089\t50021059\t50046337\t5\t49921948,50020988,50029120,50044230,50046169,\t49922104,50021177,50029219,50044361,50049089,\t0\tLypd6\tcmpl\tcmpl\t-1,0,1,1,0,\n-120\tNR_033304\tchr2\t+\t49921948\t50049089\t50049089\t50049089\t6\t49921948,49983889,50020988,50029120,50044230,50046169,\t49922104,49984054,50021177,50029219,50044361,50049089,\t0\tLypd6\tunk\tunk\t-1,-1,-1,-1,-1,-1,\n-1614\tNM_001243305\tchr4\t-\t134925491\t134941587\t134926483\t134932981\t4\t134925491,134927791,134932905,134941444,\t134926625,134927876,134932991,134941587,\t0\tA330049M08Rik\tcmpl\tcmpl\t2,1,0,-1,\n-1614\tNM_001243306\tchr4\t-\t134925491\t134954142\t134926483\t134936083\t6\t134925491,134927791,134932905,134936036,134936566,134953797,\t134926625,134927876,134932988,134936207,134936753,134954142,\t0\tA330049M08Rik\tcmpl\tcmpl\t2,1,2,0,-1,-1,\n-893\tNR_044988\tchr8\t+\t40383333\t40453622\t40453622\t40453622\t4\t40383333,40391916,40432656,40453412,\t40383574,40392002,40432757,40453622,\t0\tGm6213\tunk\tunk\t-1,-1,-1,-1,\n-843\tNR_044989\tchrX\t+\t33943471\t33944649\t33944649\t33944649\t3\t33943471,33944093,33944450,\t33943530,33944135,33944649,\t0\tGm6268\tunk\tunk\t-1,-1,-1,\n-23\tNR_044987\tchr12\t-\t118472993\t118575485\t118575485\t118575485\t3\t118472993,118498486,118575353,\t118473141,118498655,118575485,\t0\tGm5441\tunk\tunk\t-1,-1,-1,\n-966\tNR_045001\tchr16\t+\t49980572\t49997588\t49997588\t49997588\t4\t49980572,49990475,49995718,49996691,\t49980818,49990631,49995851,49997588,\t0\tGm6936\tunk\tunk\t-1,-1,-1,-1,\n-20\tNR_044992\tchr5\t+\t95417718\t95455565\t95455565\t95455565\t4\t95417718,95451908,95452693,95454095,\t95417800,95452202,95453311,95455565,\t0\tGm6367\tunk\tunk\t-1,-1,-1,-1,\n-599\tNR_044992\tchrUn_random\t-\t1919827\t1957720\t1957720\t1957720\t4\t1919827,1922081,1923190,1957638,\t1921297,1922699,1923484,1957720,\t0\tGm6367\tunk\tunk\t-1,-1,-1,-1,\n' |