| Previous changeset 1:9bf4eb559ed5 (2015-08-10) Next changeset 3:83da94c0e4a6 (2017-04-04) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_bowtie2_index_builder commit c54b039220cc3d1767a424b6ae76852d40e67437 |
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modified:
data_manager/bowtie2_index_builder.xml data_manager_conf.xml tool_dependencies.xml |
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| diff -r 9bf4eb559ed5 -r e87aeff2cf88 data_manager/bowtie2_index_builder.xml --- a/data_manager/bowtie2_index_builder.xml Mon Aug 10 16:44:10 2015 -0400 +++ b/data_manager/bowtie2_index_builder.xml Mon Nov 16 15:20:08 2015 -0500 |
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| @@ -1,7 +1,7 @@ -<tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="0.0.2"> +<tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="2.2.6"> <description>builder</description> <requirements> - <requirement type="package" version="2.2.4">bowtie2</requirement> + <requirement type="package" version="2.2.6">bowtie2</requirement> </requirements> <command interpreter="python">bowtie2_index_builder.py "${out_file}" --fasta_filename "${all_fasta_source.fields.path}" --fasta_dbkey "${all_fasta_source.fields.dbkey}" --fasta_description "${all_fasta_source.fields.name}" --data_table_name "bowtie2_indexes" ${tophat2}</command> <stdio> |
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| diff -r 9bf4eb559ed5 -r e87aeff2cf88 data_manager_conf.xml --- a/data_manager_conf.xml Mon Aug 10 16:44:10 2015 -0400 +++ b/data_manager_conf.xml Mon Nov 16 15:20:08 2015 -0500 |
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| @@ -1,7 +1,7 @@ <?xml version="1.0"?> <data_managers> - <data_manager tool_file="data_manager/bowtie2_index_builder.xml" id="bowtie2_index_builder" version="0.0.2"> + <data_manager tool_file="data_manager/bowtie2_index_builder.xml" id="bowtie2_index_builder" version="2.2.6"> <data_table name="bowtie2_indexes"> <output> <column name="value" /> |
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| diff -r 9bf4eb559ed5 -r e87aeff2cf88 tool_dependencies.xml --- a/tool_dependencies.xml Mon Aug 10 16:44:10 2015 -0400 +++ b/tool_dependencies.xml Mon Nov 16 15:20:08 2015 -0500 |
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| @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> - <package name="bowtie2" version="2.2.4"> - <repository changeset_revision="172979b6bf77" name="package_bowtie_2_2_4" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> + <package name="bowtie2" version="2.2.6"> + <repository changeset_revision="6d6cca69a34a" name="package_bowtie_2_2_6" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency> |