| Previous changeset 2:7dbbd990440e (2023-06-08) Next changeset 4:f13c03b34e2d (2024-06-03) |
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Commit message:
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vsearch commit 389df0134cd0763dcf02aac6e623fc15f8861c1e |
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modified:
qiime2__vsearch__uchime_ref.xml |
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| diff -r 7dbbd990440e -r e9b3abbe198e qiime2__vsearch__uchime_ref.xml --- a/qiime2__vsearch__uchime_ref.xml Thu Jun 08 19:52:55 2023 +0000 +++ b/qiime2__vsearch__uchime_ref.xml Thu Apr 25 21:27:40 2024 +0000 |
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| @@ -1,24 +1,24 @@ <?xml version='1.0' encoding='utf-8'?> <!-- -Copyright (c) 2023, QIIME 2 development team. +Copyright (c) 2024, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: - q2galaxy (version: 2023.5.0) + q2galaxy (version: 2024.2.1) for: - qiime2 (version: 2023.5.1) + qiime2 (version: 2024.2.0) --> -<tool name="qiime2 vsearch uchime-ref" id="qiime2__vsearch__uchime_ref" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 vsearch uchime-ref" id="qiime2__vsearch__uchime_ref" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause"> <description>Reference-based chimera filtering with vsearch.</description> <requirements> - <container type="docker">quay.io/qiime2/core:2023.5</container> + <container type="docker">quay.io/qiime2/amplicon:2024.2</container> </requirements> <version_command>q2galaxy version vsearch</version_command> <command detect_errors="exit_code">q2galaxy run vsearch uchime_ref '$inputs'</command> <configfiles> - <inputs name="inputs" data_style="paths"/> + <inputs name="inputs" data_style="staging_path_and_source_path"/> </configfiles> <inputs> <param name="sequences" type="data" format="qza" label="sequences: FeatureData[Sequence]" help="[required] The feature sequences to be chimera-checked."> @@ -45,7 +45,6 @@ <param name="mindiv" type="float" min="0.0" value="0.8" label="mindiv: Float % Range(0.0, None)" help="[default: 0.8] Minimum divergence from closest parent."/> <param name="minh" type="float" min="0.0" max="1.0" value="0.28" label="minh: Float % Range(0.0, 1.0, inclusive_end=True)" help="[default: 0.28] Minimum score (h). Increasing this value tends to reduce the number of false positives and to decrease sensitivity."/> <param name="xn" type="float" min="1.000001" value="8.0" label="xn: Float % Range(1.0, None, inclusive_start=False)" help="[default: 8.0] No vote weight, corresponding to the parameter beta in the scoring function."/> - <param name="threads" type="integer" min="0" max="256" value="1" label="threads: Int % Range(0, 256, inclusive_end=True)" help="[default: 1] The number of threads to use for computation. Passing 0 will launch one thread per CPU core."/> </section> </inputs> <outputs> |