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jvarkit/commons-jexl-2.1.1.jar jvarkit/commons-logging-1.1.1.jar jvarkit/htsjdk-1.129.jar jvarkit/snappy-java-1.0.3-rc3.jar jvarkit/vcffilterjs.jar jvarkit/vcffilterjs.xml section.xml |
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| diff -r 1bc07c072907 -r eb9aeaee2e13 jvarkit/commons-jexl-2.1.1.jar |
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| Binary file jvarkit/commons-jexl-2.1.1.jar has changed |
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| diff -r 1bc07c072907 -r eb9aeaee2e13 jvarkit/commons-logging-1.1.1.jar |
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| diff -r 1bc07c072907 -r eb9aeaee2e13 jvarkit/htsjdk-1.129.jar |
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| Binary file jvarkit/htsjdk-1.129.jar has changed |
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| diff -r 1bc07c072907 -r eb9aeaee2e13 jvarkit/snappy-java-1.0.3-rc3.jar |
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| diff -r 1bc07c072907 -r eb9aeaee2e13 jvarkit/vcffilterjs.jar |
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| Binary file jvarkit/vcffilterjs.jar has changed |
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| diff -r 1bc07c072907 -r eb9aeaee2e13 jvarkit/vcffilterjs.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/jvarkit/vcffilterjs.xml Wed Feb 25 09:09:57 2015 -0500 |
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| @@ -0,0 +1,22 @@ +<?xml version="1.0"?> +<tool hidden="false" id="com.github.lindenb.jvarkit.tools.vcffilterjs.VCFFilterJS" version="ffd9de89f479bfb81a94c9a92655a14b81d95976" name="vcffilterjs"><requirements><requirement type="binary">java</requirement></requirements>java -cp commons-jexl-2.1.1.jar:commons-logging-1.1.1.jar:htsjdk-1.129.jar:snappy-java-1.0.3-rc3.jar:vcffilterjs.jar com.github.lindenb.jvarkit.tools.vcffilterjs.VCFFilterJS -e ${expression} -o ${output} ${input}<inputs> + <param format="vcf" name="input" type="data" label="VCF input"/> + <param name="expression" type="string"/> + </inputs><inputs> + <data format="vcf" name="output"/> + </inputs><stdio><exit_code range="1:"/><exit_code range=":-1"/></stdio><help> + + +**Inputs** + + + +**Outputs** + + +**Citation** + +If you use this Galaxy tool in work leading to a scientific publication please +cite: Pierre Lindenbaum PhD @yokofakun. + + </help></tool> |
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| diff -r 1bc07c072907 -r eb9aeaee2e13 section.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/section.xml Wed Feb 25 09:09:57 2015 -0500 |
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| @@ -0,0 +1,5 @@ +<?xml version="1.0"?> +<section id="jvarkit" name="jvarkit: java utilities for bioinformatics"> + <tool file="jvarkit/vcffilterjs.xml"/> +</section> + |