| Previous changeset 1:4653aeb60243 (2023-09-29) Next changeset 3:97d2b6742760 (2024-12-13) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit bced16a45d19b243a244a093c3b3504b2640d5e0 |
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modified:
batch.xml macros.xml |
| b |
| diff -r 4653aeb60243 -r ec07e22c41f8 batch.xml --- a/batch.xml Fri Sep 29 15:39:59 2023 +0000 +++ b/batch.xml Mon Apr 22 17:44:06 2024 +0000 |
| b |
| @@ -176,7 +176,9 @@ <output name="out_capture_antitarget" file="capture.antitarget.bed" /> <output name="out_control_targetcoverage" file="normal.targetcoverage.cnn" /> <output name="out_control_antitargetcoverage" file="normal.antitargetcoverage.cnn" /> - <output name="out_reference_cnn" file="reference.cnn" /> + <output name="out_reference_cnn" file="reference.cnn" ftype="tabular" compare="sim_size"> + <assert_contents><has_size value="3000" delta="2000" /></assert_contents> + </output> <output name="out_capture_target"> <assert_contents><has_text_matching expression="chrM"/></assert_contents> </output> @@ -217,7 +219,9 @@ <output name="out_capture_antitarget" file="capture.antitarget.bed" /> <output name="out_control_targetcoverage" file="normal.targetcoverage.cnn" /> <output name="out_control_antitargetcoverage" file="normal.antitargetcoverage.cnn" /> - <output name="out_reference_cnn" file="reference.cnn" /> + <output name="out_reference_cnn" file="reference.cnn" ftype="tabular" compare="sim_size"> + <assert_contents><has_size value="3000" delta="2000" /></assert_contents> + </output> <output name="out_capture_target"> <assert_contents><has_text_matching expression="chrM"/></assert_contents> </output> |
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| diff -r 4653aeb60243 -r ec07e22c41f8 macros.xml --- a/macros.xml Fri Sep 29 15:39:59 2023 +0000 +++ b/macros.xml Mon Apr 22 17:44:06 2024 +0000 |
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| @@ -1,10 +1,10 @@ <macros> - <token name="@VERSION_SUFFIX@">0.1</token> - <token name="@TOOL_VERSION@">0.9.10</token> + <token name="@VERSION_SUFFIX@">0</token> + <token name="@TOOL_VERSION@">0.9.11</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">cnvkit</requirement> - <requirement type="package" version="1.0.2">scikit-learn</requirement> + <requirement type="package" version="1.4.2">scikit-learn</requirement> </requirements> </xml> <xml name="reference_interface"> |