| Previous changeset 1:b423473c0131 (2013-09-24) |
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Commit message:
Updated to use ngs-tools 0.1.8 with better exception handling and proper writing of error messages to sdterr. |
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modified:
ngs-tools_split_by_barcode.xml tool_dependencies.xml |
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| diff -r b423473c0131 -r ee8699b10e83 ngs-tools_split_by_barcode.xml --- a/ngs-tools_split_by_barcode.xml Tue Sep 24 11:42:15 2013 -0400 +++ b/ngs-tools_split_by_barcode.xml Tue Oct 15 13:08:50 2013 -0400 |
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| @@ -1,7 +1,7 @@ <tool id="ngs-tools_split_by_barcode" name="Barcode Splitter (ngs-tools)" force_history_refresh="True" version="1.0.1"> <description></description> <requirements> - <requirement type="package" version="0.1.6">ngs-tools</requirement> + <requirement type="package" version="0.1.8">ngs-tools</requirement> </requirements> <command> ngs-tools split-by-barcode @@ -37,7 +37,7 @@ <param format="tabular" name="barcode_index" type="data" label="Barcodes index" help="See below for description." /> <param name="barcode_length" type="integer" size="3" value="11" label="Barcode length" help="Please specify the barcode length." /> <param name="barcodes" type="text" label="Barcodes to use" help="Comma separated list of barcodes to use. By default all barcodes in the 'Barcodes index' are used." /> - <param name="trim_barcode" type="select" label="Trim the barcode" help="By default barcodes are trimmed from the resulting splitted datasets"> + <param name="trim_barcode" type="select" label="Trim the barcode" help="By default barcodes are trimmed from the resulting split datasets"> <option value="" selected="true">Yes</option> <option value="--keep-barcode">No</option> </param> @@ -45,9 +45,9 @@ </inputs> <outputs> - <data format="interval" name="output1" /> + <data format="tabular" name="output1" /> </outputs> -<help> + <help> **What it does** @@ -80,5 +80,5 @@ .. __: https://github.com/cjav/ngs-tools/ -</help> + </help> </tool> |
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| diff -r b423473c0131 -r ee8699b10e83 tool_dependencies.xml --- a/tool_dependencies.xml Tue Sep 24 11:42:15 2013 -0400 +++ b/tool_dependencies.xml Tue Oct 15 13:08:50 2013 -0400 |
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| @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> - <package name="ngs-tools" version="0.1.6"> - <repository changeset_revision="b765dd7a4187" name="package_ngs_tools_0_1_6" owner="cjav" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> + <package name="ngs-tools" version="0.1.8"> + <repository changeset_revision="6106ecedea92" name="package_ngs_tools_0_1_8" owner="cjav" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency> |