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modified:
metaphlan2_hutlab/metaphlan2.xml |
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| diff -r c7cd6467b570 -r ef38bf0b3208 metaphlan2_hutlab/metaphlan2.xml --- a/metaphlan2_hutlab/metaphlan2.xml Mon Apr 25 00:47:00 2016 -0400 +++ b/metaphlan2_hutlab/metaphlan2.xml Mon Apr 25 00:58:36 2016 -0400 |
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| @@ -3,8 +3,8 @@ <description>metagenomic profiler V2</description> <command interpreter="python">metaphlan2.py $input - --mpa_pkl $METAPHLAN_PATH/db_v20/mpa_v20_m200.pkl - --bowtie2db $METAPHLAN_PATH/db_v20/mpa_v20_m200 + --mpa_pkl $METAPHLAN2_PATH/db_v20/mpa_v20_m200.pkl + --bowtie2db $METAPHLAN2_PATH/db_v20/mpa_v20_m200 --input_type fastq --no_map --bt2_ps $PresetsForBowtie2 |