Repository 'cat_contigs'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/cat_contigs

Changeset 3:f41dbb0b9ff8 (2024-02-16)
Previous changeset 2:7aebc0137f20 (2023-03-09)
Commit message:
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 47be73f0ca2b3a3bcb79a1fa7cf15a63c7facd19
modified:
cat_contigs.xml
macros.xml
b
diff -r 7aebc0137f20 -r f41dbb0b9ff8 cat_contigs.xml
--- a/cat_contigs.xml Thu Mar 09 21:01:02 2023 +0000
+++ b/cat_contigs.xml Fri Feb 16 10:45:07 2024 +0000
[
@@ -3,6 +3,7 @@
     <macros>
         <import>macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <expand macro="version_command" />
     <command detect_errors="exit_code"><![CDATA[
@@ -30,7 +31,7 @@
         <expand macro="outputs" />
     </outputs>
     <tests>
-        <test>
+        <test expect_num_outputs="1">
             <param name="contigs_fasta" ftype="fasta" value="contigs.fasta"/>
             <expand macro="test_catdb"/>
             <param name="select_outputs" value="contig2classification"/>
@@ -40,7 +41,7 @@
                 </assert_contents>
             </output>
         </test>
-        <test>
+        <test expect_num_outputs="4">
             <param name="contigs_fasta" ftype="fasta" value="contigs.fasta"/>
             <expand macro="test_catdb"/>
             <param name="select_outputs" value="predicted_proteins_faa"/>
b
diff -r 7aebc0137f20 -r f41dbb0b9ff8 macros.xml
--- a/macros.xml Thu Mar 09 21:01:02 2023 +0000
+++ b/macros.xml Fri Feb 16 10:45:07 2024 +0000
b
@@ -1,6 +1,11 @@
 <macros>
     <token name="@TOOL_VERSION@">5.2.3</token>
     <token name="@VERSION_SUFFIX@">0</token>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">cat_bins</xref>
+        </xrefs>
+    </xml>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">cat</requirement>