Repository 'vcfallelicprimitives'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcfallelicprimitives

Changeset 1:f49b23b41a12 (2015-11-11)
Previous changeset 0:3f4fefbc52c8 (2015-03-19) Next changeset 2:0a69cff7946e (2016-09-15)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfallelicprimitives commit a1517c9d22029095120643bbe2c8fa53754dd2b7
modified:
vcfallelicprimitives.xml
b
diff -r 3f4fefbc52c8 -r f49b23b41a12 vcfallelicprimitives.xml
--- a/vcfallelicprimitives.xml Thu Mar 19 12:23:24 2015 -0400
+++ b/vcfallelicprimitives.xml Wed Nov 11 12:57:29 2015 -0500
b
@@ -17,8 +17,8 @@
     <inputs>
         <param format="vcf" name="input" type="data" label="Select VCF dataset"/>
         <param name="m_option" type="boolean" checked="false" truevalue="--use-mnps" falsevalue="" label="Retain MNPs as separate events" help="--use-mnps option"/>
-        <param name="t_option" size="20" type="text" value="Split primitives" label="Tag records which are split apart of a complex allele with this flag. " help="--tag-parsed option"/>
- <param name="max_length" type="integer" size="4" value="200" label="Do not manipulate records in which either the ALT or REF is longer than (bp)" help="--max-length option"/>
+        <param name="t_option" type="text" value="Split primitives" label="Tag records which are split apart of a complex allele with this flag. " help="--tag-parsed option"/>
+ <param name="max_length" type="integer" value="200" label="Do not manipulate records in which either the ALT or REF is longer than (bp)" help="--max-length option"/>
         <param name="keep_info" type="boolean" truevalue="--keep-info" falsevalue="" checked="False" 
             label="Maintain site and allele-level annotations when decomposing" 
             help="Note that in many cases, such as multisample VCFs, these won't be valid post-decomposition.  For biallelic loci in single-sample VCFs, they should be usable with caution. (--keep-info)"/>