Repository 'snp_dists'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/snp_dists

Changeset 1:f78492521996 (2021-10-08)
Previous changeset 0:1959cc43b414 (2019-10-19)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-dists commit 6c633d56b703fb77beb12dbe93cdd67d01b83920"
modified:
snp-dists.xml
test-data/output_all_diffs1.tabular
test-data/output_default1.tabular
test-data/output_keep_case1.tabular
b
diff -r 1959cc43b414 -r f78492521996 snp-dists.xml
--- a/snp-dists.xml Sat Oct 19 05:08:45 2019 -0400
+++ b/snp-dists.xml Fri Oct 08 07:15:59 2021 +0000
b
@@ -1,6 +1,6 @@
 <tool id="snp_dists" name="SNP distance matrix" version="@TOOL_VERSION@+galaxy0" python_template_version="3.5">
     <macros>
-        <token name="@TOOL_VERSION@">0.6.3</token>
+        <token name="@TOOL_VERSION@">0.8.2</token>
     </macros>
     <description>Compute distance in SNPs between all sequences in a FASTA file</description>
     <requirements>
@@ -11,6 +11,7 @@
             $a
             $k
             $b
+            -j \${GALAXY_SLOTS:-4}
             '$input' > '$output'
     ]]></command>
     <inputs>
b
diff -r 1959cc43b414 -r f78492521996 test-data/output_all_diffs1.tabular
--- a/test-data/output_all_diffs1.tabular Sat Oct 19 05:08:45 2019 -0400
+++ b/test-data/output_all_diffs1.tabular Fri Oct 08 07:15:59 2021 +0000
b
@@ -1,4 +1,4 @@
-snp-dists 0.6.3 MTB_anc ERR550641 ERR550671 ERR550691 ERR550703
+snp-dists 0.8.2 MTB_anc ERR550641 ERR550671 ERR550691 ERR550703
 MTB_anc 0 747 727 773 750
 ERR550641 747 0 26 44 13
 ERR550671 727 26 0 64 29
b
diff -r 1959cc43b414 -r f78492521996 test-data/output_default1.tabular
--- a/test-data/output_default1.tabular Sat Oct 19 05:08:45 2019 -0400
+++ b/test-data/output_default1.tabular Fri Oct 08 07:15:59 2021 +0000
b
@@ -1,4 +1,4 @@
-snp-dists 0.6.3 MTB_anc ERR550641 ERR550671 ERR550691 ERR550703
+snp-dists 0.8.2 MTB_anc ERR550641 ERR550671 ERR550691 ERR550703
 MTB_anc 0 746 726 772 749
 ERR550641 746 0 26 44 13
 ERR550671 726 26 0 64 29
b
diff -r 1959cc43b414 -r f78492521996 test-data/output_keep_case1.tabular
--- a/test-data/output_keep_case1.tabular Sat Oct 19 05:08:45 2019 -0400
+++ b/test-data/output_keep_case1.tabular Fri Oct 08 07:15:59 2021 +0000
b
@@ -1,4 +1,4 @@
-snp-dists 0.6.3 MTB_anc ERR550641 ERR550671 ERR550691 ERR550703
+snp-dists 0.8.2 MTB_anc ERR550641 ERR550671 ERR550691 ERR550703
 MTB_anc 0 742 722 768 745
 ERR550641 742 0 26 44 13
 ERR550671 722 26 0 64 29