Repository 'eggnog_mapper'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/eggnog_mapper

Changeset 3:f89f83f30e82 (2017-11-10)
Previous changeset 2:a37df6f6b869 (2017-11-06) Next changeset 4:2667d24b58a0 (2018-02-28)
Commit message:
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper commit 7764444d4c16da8ce25453c420ca2d821a5f2c21
modified:
eggnog_mapper.xml
b
diff -r a37df6f6b869 -r f89f83f30e82 eggnog_mapper.xml
--- a/eggnog_mapper.xml Mon Nov 06 06:14:15 2017 -0500
+++ b/eggnog_mapper.xml Fri Nov 10 02:49:47 2017 -0500
[
@@ -371,7 +371,7 @@
         <data name="annotations" format="tabular" label="${tool.name} on ${on_string}: ${db.database}.annotations" from_work_dir="results.emapper.annotations">
             <filter>not output_options['no_annot']</filter>
             <actions>
-                <action name="column_names" type="metadata" default="query_name,seed_eggNOG_ortholog,seed_ortholog_evalue,seed_ortholog_score,predicted_gene_name,GO_terms,KEGG_pathways,Annotation_tax_scope,Matching_OGs,best_OG|evalue|score,COG,functional,categories,eggNOG_HMM_model_annotation"/>
+                <action name="column_names" type="metadata" default="query_name,seed_eggNOG_ortholog,seed_ortholog_evalue,seed_ortholog_score,predicted_gene_name,GO_terms,KEGG_KO,BiGG_Reactions,Annotation_tax_scope,Matching_OGs,best_OG|evalue|score,COG_functional_categories,eggNOG_HMM_model_annotation"/>
             </actions>
         </data>
         <data name="hmm_hits" format="tabular" label="${tool.name} on ${on_string}: ${db.database}.hmm_hits"  from_work_dir="results.emapper.hmm_hits">