| Previous changeset 1:57db282ca204 (2024-03-07) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_omamer commit b890cd87ef5cfaa81eda29cc935de224ecb05bb6 |
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modified:
data_manager/macros.xml data_manager/omamer.py data_manager/omamer.xml |
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| diff -r 57db282ca204 -r f8d72275878e data_manager/macros.xml --- a/data_manager/macros.xml Thu Mar 07 14:28:42 2024 +0000 +++ b/data_manager/macros.xml Wed Aug 14 15:42:46 2024 +0000 |
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| @@ -1,7 +1,7 @@ <macros> <token name="@TOOL_VERSION@">2.0.2</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@VERSION_SUFFIX@">2</token> <xml name="requirements"> <requirements> |
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| diff -r 57db282ca204 -r f8d72275878e data_manager/omamer.py --- a/data_manager/omamer.py Thu Mar 07 14:28:42 2024 +0000 +++ b/data_manager/omamer.py Wed Aug 14 15:42:46 2024 +0000 |
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| @@ -12,10 +12,13 @@ # List of OMAmer data sets with versions OMAMER_DATASETS = { - "Primates": "Primates-v2.0.0.h5", - "Viridiplantae": "Viridiplantae-v2.0.0.h5", - "Metazoa": "Metazoa-v2.0.0.h5", - "LUCA": "LUCA-v0.2.5.h5", + "Primates_v2.0.0": "Primates-v2.0.0.h5", + "Viridiplantae_v2.0.0": "Viridiplantae-v2.0.0.h5", + "Metazoa_v2.0.0": "Metazoa-v2.0.0.h5", + "LUCA_v0.2.5": "LUCA-v0.2.5.h5", + "LUCA_v2.0.0": "LUCA-v2.0.0.h5", + "Saccharomyceta": "Saccharomyceta.h5", + "Homininae": "Homininae.h5", } DEFAULT_OUTPUT_DIR = "database_omamer" |
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| diff -r 57db282ca204 -r f8d72275878e data_manager/omamer.xml --- a/data_manager/omamer.xml Thu Mar 07 14:28:42 2024 +0000 +++ b/data_manager/omamer.xml Wed Aug 14 15:42:46 2024 +0000 |
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| @@ -12,10 +12,13 @@ <inputs> <param name="output_dir" type="text" label="Output Directory" value=""/> <param name="name" type="select" label="Database"> - <option value="Primates">Primates</option> - <option value="Viridiplantae">Viridiplantae</option> - <option value="Metazoa">Metazoa</option> - <option value="LUCA">LUCA</option> + <option value="Primates_v2.0.0">Primates_v2.0.0</option> + <option value="Viridiplantae_v2.0.0">Viridiplantae_v2.0.0</option> + <option value="Metazoa_v2.0.0">Metazoa_v2.0.0</option> + <option value="LUCA_v0.2.5">LUCA_v0.2.5</option> + <option value="LUCA_v2.0.0">LUCA_v2.0.0</option> + <option value="Saccharomyceta">Saccharomyceta</option> + <option value="Homininae">Homininae</option> </param> </inputs> @@ -26,7 +29,7 @@ <tests> <test> <param name="output_dir" value="test_galaxy"/> - <param name="name" value="Primates"/> + <param name="name" value="Primates_v2.0.0"/> <output name="output_file" file="out.json"/> </test> </tests> |