| Previous changeset 11:618d74240c7f (2014-06-16) Next changeset 13:c60d1f18fd85 (2014-07-01) |
|
Commit message:
Uploaded |
|
added:
tandem_to_pepxml.xml |
| b |
| diff -r 618d74240c7f -r f9271f6991b1 tandem_to_pepxml.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tandem_to_pepxml.xml Mon Jun 16 07:20:42 2014 -0400 |
| b |
| @@ -0,0 +1,25 @@ +<tool id="tandem_to_pepxml_1" name="Tandem to pepXML" version="1.0.1"> + <requirements> + <requirement type="package" version="1.3.0">protk</requirement> + <requirement type="package" version="4.6.3">trans_proteomic_pipeline</requirement> + </requirements> + + <description>Converts a tandem result file to pepXML</description> + +<command> + tandem_to_pepxml.rb $input_file -o $output +</command> + +<inputs> + <param name="input_file" type="data" format="tandem" multiple="false" label="Input File" help="X!Tandem results file"/> +</inputs> + +<outputs> + <data format="raw_pepxml" metadata_source="input_file" name="output" label="${input_file.display_name}.pepXML" /> +</outputs> + +<help> + Convert X!Tandem results to pepXML +</help> + +</tool> |