Repository 'amrfinderplus'
hg clone https://toolshed.g2.bx.psu.edu/repos/thanhlv/amrfinderplus

Changeset 1:f92ab7729a35 (2019-09-10)
Previous changeset 0:23454c5b9812 (2019-09-10) Next changeset 2:a9e5d593228e (2019-09-11)
Commit message:
planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/ncbi-armfinderplus commit 5309939481db8366b07c9a4bcb38101c81f9ff5a
modified:
amrfinderplus.xml
tool_data_table_conf.xml.sample
tool_data_table_conf.xml.test
b
diff -r 23454c5b9812 -r f92ab7729a35 amrfinderplus.xml
--- a/amrfinderplus.xml Tue Sep 10 11:40:13 2019 -0400
+++ b/amrfinderplus.xml Tue Sep 10 12:32:19 2019 -0400
b
@@ -86,7 +86,7 @@
                 <validator message="No database is available" type="no_options" />
             </options>
         </param>
-        <param name="organism" type="select" label="Get organism-specific results">
+        <param name="organism" type="select" optional="true" label="Get organism-specific results">
             <option value="none" selected="true">None</option>
             <option value="Campylobacter">Campylobacter</option>
             <option value="Escherichia">Escherichia</option>
b
diff -r 23454c5b9812 -r f92ab7729a35 tool_data_table_conf.xml.sample
--- a/tool_data_table_conf.xml.sample Tue Sep 10 11:40:13 2019 -0400
+++ b/tool_data_table_conf.xml.sample Tue Sep 10 12:32:19 2019 -0400
b
@@ -4,4 +4,4 @@
         <columns>value, name, path</columns>
         <file path="tool-data/amrfinder_databases.loc" />
     </table>
-</tables>
\ No newline at end of file
+</tables>
b
diff -r 23454c5b9812 -r f92ab7729a35 tool_data_table_conf.xml.test
--- a/tool_data_table_conf.xml.test Tue Sep 10 11:40:13 2019 -0400
+++ b/tool_data_table_conf.xml.test Tue Sep 10 12:32:19 2019 -0400
b
@@ -4,4 +4,4 @@
         <columns>value, name, path</columns>
         <file path="${__HERE__}/test-data/amrfinder_databases.loc" />
     </table>
-</tables>
\ No newline at end of file
+</tables>