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Commit message:
"planemo upload for repository https://github.com/HegemanLab/w4mclassfilter_galaxy_wrapper/tree/master commit aaac8e2f8de03c01e5064abf8a2e30020fabe7ca" |
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modified:
w4mclassfilter.xml |
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| diff -r 87ec0d3c2266 -r f9cb2244fd01 w4mclassfilter.xml --- a/w4mclassfilter.xml Fri Jan 03 11:07:39 2020 -0500 +++ b/w4mclassfilter.xml Thu Mar 11 21:07:10 2021 +0000 |
| [ |
| @@ -1,12 +1,9 @@ -<tool id="w4mclassfilter" name="W4m Data Subset" version="0.98.18"> +<tool id="w4mclassfilter" name="W4m Data Subset" version="0.98.19"> <description>Filter W4M data by values or metadata</description> - <!-- Here is the hyphenation standard that I *try* to apply consistently in my documentation: - https://web.archive.org/web/20161014025757/http://www.sandranoonan.com/dont-let-hyphenation-drive-crazy/ - --> <requirements> - <requirement type="package" version="3.6.2">r-base</requirement> + <requirement type="package" version="4.0.3">r-base</requirement> <requirement type="package" version="1.1_5">r-batch</requirement> - <requirement type="package" version="0.98.18">w4mclassfilter</requirement> + <requirement type="package" version="0.98.19">w4mclassfilter</requirement> </requirements> <command detect_errors="aggressive"><![CDATA[ unset R_HOME; @@ -602,7 +599,42 @@ </assert_contents> </output> </test> + <!-- test 13 --> + <test> + <param name="dataMatrix_in" value="input_med1_dm.tsv"/> + <param name="sampleMetadata_in" value="input_med1_sm.tsv"/> + <param name="variableMetadata_in" value="input_med1_vm.tsv"/> + <param name="classnameColumn" value="pcgroup"/> + <param name="sampleclassNames" value=""/> + <param name="wildcards" value="TRUE"/> + <param name="inclusive" value="FALSE"/> + <param name="imputation" value="zero"/> + <param name="order_vrbl" value="sample"/> + <param name="order_smpl" value="pcgroup"/> + <param name="centering" value="medoid"/> + <output name="sampleMetadata_out"> + <assert_contents> + <has_text text="X10" /> + <has_text text="M70T1043" /> + <has_text text="70.01229" /> + <has_text text="1042.837" /> + <has_text text="X345" /> + <has_text text="M74T33" /> + <not_has_text text="M70T1042_1" /> + <not_has_text text="M74T34" /> + </assert_contents> + </output> + <output name="dataMatrix_out"> + <assert_contents> + <has_text text="X10" /> + <has_text text="X345" /> + </assert_contents> + </output> + </test> </tests> + <!-- Here is the hyphenation standard that I *try* to apply consistently in my documentation: + https://web.archive.org/web/20161014025757/http://www.sandranoonan.com/dont-let-hyphenation-drive-crazy/ + --> <help><![CDATA[ @@ -625,7 +657,7 @@ --------------------------------------------------- ====================================================== -"W4M Data Subset" - Filter Workflow4Metabolomics data +"W4M Data Subset" - Filter Workflow4Metabolomics data ====================================================== ---------- |