Repository 'sinto_barcode'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/sinto_barcode

Changeset 3:fb61eb03e313 (2024-11-05)
Previous changeset 2:d0f56ac6bb60 (2024-09-28)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sinto commit 4a156b17a386e1ecf13dfb2b232a1fc7d8344adc
modified:
macros.xml
sinto_barcode.xml
b
diff -r d0f56ac6bb60 -r fb61eb03e313 macros.xml
--- a/macros.xml Sat Sep 28 16:34:26 2024 +0000
+++ b/macros.xml Tue Nov 05 11:51:48 2024 +0000
b
@@ -2,7 +2,11 @@
 <macros>
     <token name="@TOOL_VERSION@">0.10.1</token>
     <token name="@VERSION_SUFFIX@">0</token>
-
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">sinto</xref>
+        </xrefs>
+      </xml>
     <xml name="citations">
         <citations>
             <citation type="doi">10.1038/s41592-021-01282-5</citation>
b
diff -r d0f56ac6bb60 -r fb61eb03e313 sinto_barcode.xml
--- a/sinto_barcode.xml Sat Sep 28 16:34:26 2024 +0000
+++ b/sinto_barcode.xml Tue Nov 05 11:51:48 2024 +0000
b
@@ -3,6 +3,7 @@
     <macros>
         <import>macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">sinto</requirement>
     </requirements>
@@ -13,8 +14,8 @@
     #if str( $fastq_input.fastq_input_selector ) == "paired":
     ln -s '${fastq_input.read2_fastq}' read2.fastq.gz &&
     #end if
-    sinto barcode 
-    --barcode_fastq barcodes.fastq.gz 
+    sinto barcode
+    --barcode_fastq barcodes.fastq.gz
     --read1 read1.fastq.gz
     #if str( $fastq_input.fastq_input_selector ) == "paired":
     --read2 read2.fastq.gz