Repository 'jbrowse'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/jbrowse

Changeset 39:fd5dbf0f732e (2020-04-28)
Previous changeset 38:667e17248bfe (2020-02-12) Next changeset 40:17359b808b01 (2020-08-21)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 145eb8fdc1460af572d90991d048432f8e9582da"
modified:
jbrowse.xml
macros.xml
b
diff -r 667e17248bfe -r fd5dbf0f732e jbrowse.xml
--- a/jbrowse.xml Wed Feb 12 03:35:41 2020 -0500
+++ b/jbrowse.xml Tue Apr 28 10:01:04 2020 -0400
b
@@ -81,9 +81,15 @@
                       edam_format="${reference_genome.genome.datatype.edam_format}"
                       file_ext="${reference_genome.genome.ext}" />
                   <history id="${__app__.security.encode_id($reference_genome.genome.history_id)}"
+                      #if $reference_genome.genome.history.user:
                       user_email="${reference_genome.genome.history.user.email}"
                       user_id="${reference_genome.genome.history.user_id}"
                       display_name="${reference_genome.genome.history.get_display_name()}"/>
+                      #else
+                      user_email="anonymous"
+                      user_id="-1"
+                      display_name="Unnamed History"/>
+                      #end if
                   <metadata
                       #for (key, value) in $reference_genome.genome.get_metadata().items():
                       #if "_types" not in $key:
@@ -127,9 +133,15 @@
                       edam_format="${dataset.datatype.edam_format}"
                       file_ext="${dataset.ext}" />
                   <history id="${__app__.security.encode_id($dataset.history_id)}"
+                      #if $dataset.history.user:
                       user_email="${dataset.history.user.email}"
                       user_id="${dataset.history.user_id}"
                       display_name="${dataset.history.get_display_name()}"/>
+                      #else
+                      user_email="anonymous"
+                      user_id="-1"
+                      display_name="Unnamed History"/>
+                      #end if
                   <metadata
                     #for (key, value) in $dataset.get_metadata().items():
                     #if "_types" not in $key and $value is not None and len(str($value)) < 5000:
b
diff -r 667e17248bfe -r fd5dbf0f732e macros.xml
--- a/macros.xml Wed Feb 12 03:35:41 2020 -0500
+++ b/macros.xml Tue Apr 28 10:01:04 2020 -0400
[
@@ -15,7 +15,7 @@
     </requirements>
   </xml>
   <token name="@DATA_DIR@">\$GALAXY_JBROWSE_SHARED_DIR</token>
-  <token name="@WRAPPER_VERSION@">galaxy0</token>
+  <token name="@WRAPPER_VERSION@">galaxy1</token>
   <token name="@ATTRIBUTION@"><![CDATA[
 **Attribution**