| Previous changeset 0:6f9ffff040ce (2019-12-17) Next changeset 2:9cb929f21cfa (2020-03-21) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lofreq commit 9e41ac63171c3e3a6fd2b4d018d0c60c9f1fbae1" |
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modified:
lofreq_filter.xml test-data/viterbi-out1.bam |
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| diff -r 6f9ffff040ce -r fdba1586551d lofreq_filter.xml --- a/lofreq_filter.xml Tue Dec 17 17:26:32 2019 -0500 +++ b/lofreq_filter.xml Fri Jan 31 06:18:08 2020 -0500 |
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| @@ -1,4 +1,4 @@ -<tool id="lofreq_filter" name="Lofreq filter" version="@TOOL_VERSION@"> +<tool id="lofreq_filter" name="Lofreq filter" version="@TOOL_VERSION@+galaxy1"> <description>called variants posteriorly</description> <macros> <import>macros.xml</import> @@ -141,10 +141,10 @@ </section> <section name="af" title="Allele frequency filter options" expanded="True" help="You can specify a range of acceptable allele frequencies at variant sites by setting minimum and maximum AF values. Set either value to zero to make the range unbounded on the corresponding side, or disable filtering based on allele frequency by setting both values to zero."> - <param argument="-a" name="af_min" type="float" min="0" value="0" + <param argument="-a" name="af_min" type="float" min="0" max="1" value="0" label="Minimum allele frequency" help="To keep a variant its allele needs to be observed at this frequency at least." /> - <param argument="-A" name="af_max" type="float" min="0" value="0" + <param argument="-A" name="af_max" type="float" min="0" max="1" value="0" label="Maximum allele frequency" help="To keep a variant its allele is allowed to be observed at this frequency at most." /> </section> |
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| diff -r 6f9ffff040ce -r fdba1586551d test-data/viterbi-out1.bam |
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| Binary file test-data/viterbi-out1.bam has changed |