| Previous changeset 8:759ba5c7faca (2017-04-27) Next changeset 10:dab92afa0c98 (2019-09-26) |
|
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 6ecb1ddafc5575514f9929430e5452027ad02439 |
|
modified:
macros.xml |
|
added:
test-data/clonefilter/R1_0001.1.fq.gz test-data/clonefilter/R2_0001.2.fq.gz test-data/clonefilter/Removed1_0001.1.1.fq.gz test-data/clonefilter/Removed1_0001.1.1.fq.single.gz test-data/clonefilter/Removed2_0001.2.2.fq.gz |
| b |
| diff -r 759ba5c7faca -r ff1f282d731e macros.xml --- a/macros.xml Thu Apr 27 04:18:23 2017 -0400 +++ b/macros.xml Sun May 21 18:54:53 2017 -0400 |
| b |
| @@ -391,4 +391,19 @@ </when> </conditional> </xml> + + <xml name="barcode_encoding_single"> + <option value="--inline_null" selected="True">Barcode is inline with sequence</option> + <option value="--index_null">Barcode is provided in FASTQ header</option> + </xml> + + <xml name="barcode_encoding_pair"> + <option value="--inline_null" selected="True">Barcode is inline with sequence</option> + <option value="--null_index">random oligo is provded in FASTQ header (Illumina i7 read if both i5 and i7 read are provided).</option> + <option value="--index_null">random oligo is provded in FASTQ header (Illumina i5 or i7 read)</option> + <option value="--inline_inline">random oligo is inline with sequence, occurs on single and paired-end read</option> + <option value="--index_index">random oligo is provded in FASTQ header (Illumina i5 and i7 read)</option> + <option value="--inline_index">random oligo is inline with sequence on single-end read and second oligo occurs in FASTQ header</option> + <option value="--index_inline">random oligo occurs in FASTQ header (Illumina i5 or i7 read) and is inline with sequence on single-end read (if single read data) or paired-end read (if paired data)</option> + </xml> </macros> |
| b |
| diff -r 759ba5c7faca -r ff1f282d731e test-data/clonefilter/R1_0001.1.fq.gz |
| b |
| Binary file test-data/clonefilter/R1_0001.1.fq.gz has changed |
| b |
| diff -r 759ba5c7faca -r ff1f282d731e test-data/clonefilter/R2_0001.2.fq.gz |
| b |
| Binary file test-data/clonefilter/R2_0001.2.fq.gz has changed |
| b |
| diff -r 759ba5c7faca -r ff1f282d731e test-data/clonefilter/Removed1_0001.1.1.fq.gz |
| b |
| Binary file test-data/clonefilter/Removed1_0001.1.1.fq.gz has changed |
| b |
| diff -r 759ba5c7faca -r ff1f282d731e test-data/clonefilter/Removed1_0001.1.1.fq.single.gz |
| b |
| Binary file test-data/clonefilter/Removed1_0001.1.1.fq.single.gz has changed |
| b |
| diff -r 759ba5c7faca -r ff1f282d731e test-data/clonefilter/Removed2_0001.2.2.fq.gz |
| b |
| Binary file test-data/clonefilter/Removed2_0001.2.2.fq.gz has changed |