| Previous changeset 0:f48ed38dfddf (2018-08-02) Next changeset 2:b03ae2ba8688 (2019-06-28) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit 9655295f3e3f9831fe1e04c1bc7f9b5db1046ec5 |
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modified:
exonerate.xml |
| b |
| diff -r f48ed38dfddf -r 2485637fe656 exonerate.xml --- a/exonerate.xml Thu Aug 02 09:11:30 2018 -0400 +++ b/exonerate.xml Wed Oct 17 09:49:43 2018 -0400 |
| [ |
| @@ -83,10 +83,10 @@ <param name='bestn' type='integer' min="0" max="10000" value="0" label="Report best N results per query (0 to report all)"/> </inputs> <outputs> - <data name="output_gff" format="txt" label="${tool.name} on $on_string"> + <data name="output_gff" format="gff" label="${tool.name} on $on_string"> <filter>outformat != 'alignment'</filter> </data> - <data name="output_ali" format="gff" label="${tool.name} on $on_string"> + <data name="output_ali" format="txt" label="${tool.name} on $on_string"> <filter>outformat == 'alignment'</filter> </data> </outputs> @@ -98,7 +98,7 @@ <param name="input_fasta" value="genome.fa"/> </conditional> <param name="outformat" value="targetgff"/> - <output name="output_gff" file="out_target.gff"/> + <output name="output_gff" file="out_target.gff" lines_diff="8"/> </test> <test> <param name="query" value="genome.fa"/> @@ -107,7 +107,7 @@ <param name="input_fasta" value="merlin"/> </conditional> <param name="outformat" value="targetgff"/> - <output name="output_gff" file="out_target.gff"/> + <output name="output_gff" file="out_target.gff" lines_diff="8"/> </test> <test> <param name="query" value="genome.fa"/> @@ -116,7 +116,7 @@ <param name="input_fasta" value="genome.fa"/> </conditional> <param name="outformat" value="querygff"/> - <output name="output_gff" file="out_query.gff"/> + <output name="output_gff" file="out_query.gff" lines_diff="8"/> </test> <test> <param name="query" value="genome.fa"/> @@ -135,7 +135,7 @@ </conditional> <param name="model" value="est2genome"/> <param name="outformat" value="targetgff"/> - <output name="output_gff" file="est2genome.gff"/> + <output name="output_gff" file="est2genome.gff" lines_diff="4"/> </test> <test> <param name="query" value="proteome.fa"/> @@ -145,7 +145,7 @@ </conditional> <param name="model" value="protein2genome"/> <param name="outformat" value="targetgff"/> - <output name="output_gff" file="protein2genome.gff"/> + <output name="output_gff" file="protein2genome.gff" lines_diff="2"/> </test> <test> <param name="query" value="genome.fa"/> @@ -155,7 +155,7 @@ </conditional> <param name="model" value="coding2coding"/> <param name="outformat" value="targetgff"/> - <output name="output_gff" file="coding2coding.gff"/> + <output name="output_gff" file="coding2coding.gff" lines_diff="4"/> </test> </tests> <help><![CDATA[ |