Repository 'mothur_indicator'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_indicator

Changeset 2:5d1f9418ff72 (2017-09-08)
Previous changeset 1:b569c0119fe2 (2017-09-05) Next changeset 3:c6524e1efe12 (2018-03-20)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit ca8dc573528ab7c5290bc6ca029cb989f4755db6
modified:
indicator.xml
b
diff -r b569c0119fe2 -r 5d1f9418ff72 indicator.xml
--- a/indicator.xml Tue Sep 05 16:58:50 2017 -0400
+++ b/indicator.xml Fri Sep 08 14:34:37 2017 -0400
b
@@ -53,7 +53,7 @@
                 <option value="no">no</option>
             </param>
             <when value="yes">
-                <param name="tree" type="data" format="tree" optional="true" label="tree - A newick-formatted tree" help="Optional, if a design file is provided."/>
+                <param name="tree" type="data" format="mothur.tre" optional="true" label="tree - A newick-formatted tree" help="Optional, if a design file is provided."/>
                 <param name="design" type="data" format="mothur.design" optional="true" label="design - assign groups to new grouping" help="make sure your file is of type mothur.design. Design has 2 columns: group(col 1) and grouping(col 2) (separated by a TAB character)"/>
                 <param name="groups" type="select" optional="true" multiple="true" label="groups - Pick groups to annalyze">
                     <options>
@@ -62,7 +62,7 @@
                 </param>
             </when>
             <when value="no">
-                <param name="tree" type="data" format="tree" label="tree - A newick-formatted tree" help="Mandatory if no design file is provided"/>
+                <param name="tree" type="data" format="mothur.tre" label="tree - A newick-formatted tree" help="Mandatory if no design file is provided"/>
                 <param name="groups" type="select" optional="true" multiple="true" label="groups - Pick groups to annalyze">
                     <options>
                         <filter type="data_meta" ref="otu" key="groups"/>