Repository 'peptideshaker'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker

Changeset 31:f3f67aa3123b (2017-01-18)
Previous changeset 30:ad60446b1e93 (2017-01-13) Next changeset 32:ff592231f118 (2017-01-25)
Commit message:
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 9434ce2f6323d91e6b10eeabab531d5e13ef4a6f
modified:
searchgui.xml
b
diff -r ad60446b1e93 -r f3f67aa3123b searchgui.xml
--- a/searchgui.xml Fri Jan 13 14:15:42 2017 -0500
+++ b/searchgui.xml Wed Jan 18 16:43:44 2017 -0500
[
@@ -30,7 +30,7 @@
         echo "searchgui.version=@SEARCHGUI_VERSION@" >> searchgui.properties;
 
         #for $mgf in $peak_lists:
-            #set $input_name = $mgf.display_name.replace(".mgf", "") + ".mgf"
+            #set $input_name = $mgf.display_name.split('/')[-1].replace(".mgf", "") + ".mgf"
             ln -s -f '${mgf}' '${input_name}';
             #set $encoded_id = $__app__.security.encode_id($mgf.id)
             echo "Spectrums:${mgf.display_name}(API:${encoded_id}) ";