| Previous changeset 2:051f5801c819 (2020-04-29) Next changeset 4:fd06ab29487f (2020-06-01) |
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Commit message:
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 2f718294665c9d01702ad765904972f463154cd6" |
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modified:
scpred_predict.xml |
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| diff -r 051f5801c819 -r 1bc003e80986 scpred_predict.xml --- a/scpred_predict.xml Wed Apr 29 12:42:24 2020 -0400 +++ b/scpred_predict.xml Fri May 01 10:13:20 2020 -0400 |
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| @@ -1,4 +1,4 @@ -<tool id="scpred_predict_labels" name="Scpred predict" version="@TOOL_VERSION@+galaxy1"> +<tool id="scpred_predict_labels" name="Scpred predict" version="@TOOL_VERSION@+galaxy2"> <description>Make cell type predictions using trained model.</description> <macros> <import>scpred_macros.xml</import> @@ -24,8 +24,8 @@ <inputs> <param type="data" name="input_object" label="Input SCE object" format="rdata" help="Input SCE object in .rds format" /> <param type="data" name="pred_data" label="Matrix with query data" format="rdata" help="Path to the input prediction matrix in .rds format"/> - <param type="data" name="test_labels" format="txt" label="Test labels" help="Path to the test labels file for evalutation of model performance in text format" /> - <param type="text" name="cell_types_column" value="cell_type2" label="Cell types column name" help="Column name of true labels in provided metadata file" /> + <param type="data" name="test_labels" optional="true" format="txt" label="Test labels" help="Path to the test labels file for evalutation of model performance in text format" /> + <param type="text" name="cell_types_column" value="cell_type2" optional="true" label="Cell types column name" help="Column name of true labels in provided metadata file" /> </inputs> <outputs> <data name="output_tbl_path" format="txt" /> |