| Previous changeset 1:150b3fe44caa (2013-04-02) Next changeset 3:b4427dbb6ced (2014-01-16) |
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Commit message:
Uploaded updated tool dependency definition. |
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modified:
tool_dependencies.xml |
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| diff -r 150b3fe44caa -r 24fa4e22021a tool_dependencies.xml --- a/tool_dependencies.xml Tue Apr 02 12:23:14 2013 -0400 +++ b/tool_dependencies.xml Tue Dec 17 09:20:58 2013 -0500 |
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| @@ -1,21 +1,6 @@ <?xml version="1.0"?> <tool_dependency> <package name="bwa" version="0.5.9"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action> - <action type="shell_command">make</action> - <action type="move_file"> - <source>bwa</source> - <destination>$INSTALL_DIR/bin</destination> - </action> - <action type="set_environment"> - <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> - </action> - </actions> - </install> - <readme> -Compiling BWA requires zlib and libpthread to be present on your system. - </readme> + <repository changeset_revision="0eb3d3c40344" name="package_bwa_0_5_9" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> </package> -</tool_dependency> \ No newline at end of file +</tool_dependency> |