Repository 'seq_filter_by_mapping'
hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/seq_filter_by_mapping

Changeset 5:1d6c149ca211 (2023-11-30)
Previous changeset 4:f82868a026ea (2021-04-16) Next changeset 6:566e456371c6 (2023-11-30)
Commit message:
Bump Biopython dependency
modified:
tools/seq_filter_by_mapping/README.rst
tools/seq_filter_by_mapping/seq_filter_by_mapping.xml
b
diff -r f82868a026ea -r 1d6c149ca211 tools/seq_filter_by_mapping/README.rst
--- a/tools/seq_filter_by_mapping/README.rst Fri Apr 16 22:22:47 2021 +0000
+++ b/tools/seq_filter_by_mapping/README.rst Thu Nov 30 09:50:23 2023 +0000
b
@@ -1,7 +1,7 @@
 Galaxy tool to filter FASTA, FASTQ or SFF sequences by SAM/BAM mapping
 ======================================================================
 
-This tool is copyright 2014-2017 by Peter Cock, The James Hutton Institute
+This tool is copyright 2014-2023 by Peter Cock, The James Hutton Institute
 (formerly SCRI, Scottish Crop Research Institute), UK. All rights reserved.
 See the licence text below.
 
@@ -72,6 +72,7 @@
         - Single quote command line arguments (internal change only).
 v0.0.6  - Python 3 compatible print function.
 v0.0.7  - Script works on Python 2 and 3 (fixed input file mode)
+v0.0.8  - Bumped Biopython dependency version for Python 3 fixes.
 ======= ======================================================================
 
 
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diff -r f82868a026ea -r 1d6c149ca211 tools/seq_filter_by_mapping/seq_filter_by_mapping.xml
--- a/tools/seq_filter_by_mapping/seq_filter_by_mapping.xml Fri Apr 16 22:22:47 2021 +0000
+++ b/tools/seq_filter_by_mapping/seq_filter_by_mapping.xml Thu Nov 30 09:50:23 2023 +0000
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@@ -1,7 +1,7 @@
-<tool id="seq_filter_by_mapping" name="Filter sequences by mapping" version="0.0.7">
+<tool id="seq_filter_by_mapping" name="Filter sequences by mapping" version="0.0.8">
     <description>from SAM/BAM file</description>
     <requirements>
-        <requirement type="package" version="1.67">biopython</requirement>
+        <requirement type="package" version="1.81">biopython</requirement>
         <requirement type="package" version="0.1.19">samtools</requirement>
     </requirements>
     <version_command>