| Previous changeset 1:60a52f8460a1 (2013-10-09) Next changeset 3:beab768feb92 (2013-12-04) |
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Commit message:
Fix wrapper bugs: (a) do not try update check and (b) allow spaces in labels. |
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modified:
cuffdiff_wrapper.xml |
| b |
| diff -r 60a52f8460a1 -r 2d6a90609943 cuffdiff_wrapper.xml --- a/cuffdiff_wrapper.xml Wed Oct 09 12:49:03 2013 -0400 +++ b/cuffdiff_wrapper.xml Tue Oct 22 11:03:02 2013 -0400 |
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| @@ -7,6 +7,7 @@ <version_command>cuffdiff 2>&1 | head -n 1</version_command> <command> cuffdiff + --no-update-check --FDR=$fdr --num-threads="4" --min-alignment-count=$min_alignment_count @@ -36,7 +37,7 @@ #end if #end if - #set labels = ','.join( [ str( $condition.name ) for $condition in $conditions ] ) + #set labels = '\'' + '\',\''.join( [ str( $condition.name ) for $condition in $conditions ] ) + '\'' --labels $labels ## Inputs. |