Repository 'cuffdiff'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/cuffdiff

Changeset 6:604fa75232a2 (2014-01-16)
Previous changeset 5:63b3133e535b (2014-01-09) Next changeset 7:8da0eade1f59 (2014-12-19)
Commit message:
Convert tool to use $GALAXY_SLOTS if available.
modified:
cuffdiff_wrapper.xml
b
diff -r 63b3133e535b -r 604fa75232a2 cuffdiff_wrapper.xml
--- a/cuffdiff_wrapper.xml Thu Jan 09 14:27:59 2014 -0500
+++ b/cuffdiff_wrapper.xml Thu Jan 16 13:13:52 2014 -0500
b
@@ -9,7 +9,7 @@
         cuffdiff
             --no-update-check
             --FDR=$fdr
-            --num-threads="4"
+            --num-threads="\${GALAXY_SLOTS:-4}"
             --min-alignment-count=$min_alignment_count
             --library-norm-method=$library_norm_method
             --dispersion-method=$dispersion_method