| Previous changeset 36:6543a5d937c4 (2026-02-10) Next changeset 38:9f71cd7b2554 (2026-02-25) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/hyphy commit 74395802c1621d4b2a169b3953090ad736f6fc70 |
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modified:
macros.xml |
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added:
test-data/annotate-list1.txt |
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removed:
test-data/annotate-out1-full.nhx |
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| diff -r 6543a5d937c4 -r 011f70f720ac macros.xml --- a/macros.xml Tue Feb 10 12:09:57 2026 +0000 +++ b/macros.xml Fri Feb 20 08:31:43 2026 +0000 |
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| @@ -1,7 +1,7 @@ <?xml version="1.0"?> <macros> <token name="@TOOL_VERSION@">2.5.93</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@VERSION_SUFFIX@">2</token> <token name="@PROFILE@">24.0</token> <token name="@SHELL_OPTIONS@">export TERM="vt100"; </token> @@ -265,6 +265,7 @@ <add value="]"/> <add value="."/> <add value=","/> + <add value="_"/> </valid> </sanitizer> <validator type="empty_field" /> |
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| diff -r 6543a5d937c4 -r 011f70f720ac test-data/annotate-list1.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/annotate-list1.txt Fri Feb 20 08:31:43 2026 +0000 |
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| @@ -0,0 +1,5 @@ +gb_MW540268_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01380_2020_Segment_null_4 +gb_MW518841_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_220_2020_Segment_null_1 +gb_MW525081_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MO_CDC_STM_0000025_G03_2021_Segment_null_1 +epi_isl_1041403/hCoV-19/USA/NY-PRL-2021_02_08_05H08/2021 +epi_isl_1041406/hCoV-19/USA/NY-PRL-2021_02_08_05H12/2021 |
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| diff -r 6543a5d937c4 -r 011f70f720ac test-data/annotate-out1-full.nhx --- a/test-data/annotate-out1-full.nhx Tue Feb 10 12:09:57 2026 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
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| @@ -1,1 +0,0 @@ -((gb_MW467454_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_A_46_2020_Segment_null_1:0.000523,epi_isl_1041403/hCoV-19/USA/NY-PRL-2021_02_08_05H08/2021{Annotated}:1e-06)Node1:1e-06,REFERENCE:0.000262,(gb_MW540268_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01380_2020_Segment_null_4{Annotated}:0.001835,(gb_MT496989_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC63_2020_Segment_null_3:1e-06,(gb_MW518841_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_220_2020_Segment_null_1{Annotated}:0.000786,(gb_MW525081_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MO_CDC_STM_0000025_G03_2021_Segment_null_1{Annotated}:0.000785,epi_isl_1041406/hCoV-19/USA/NY-PRL-2021_02_08_05H12/2021{Annotated}:0.823959)Node11{Annotated}:1e-06)Node9{Annotated}:1e-06)Node7:0.000262)Node5:1e-06) \ No newline at end of file |