Repository 'cardinal_mz_images'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_mz_images

Changeset 12:a95a82eb4d50 (2020-10-21)
Previous changeset 11:daf2ee9127fd (2020-10-06) Next changeset 13:a2b57ea6666e (2020-11-29)
Commit message:
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit ca7bdf2cbc8a79278c56ab6890e038710a2a9ad8"
modified:
mz_images.xml
b
diff -r daf2ee9127fd -r a95a82eb4d50 mz_images.xml
--- a/mz_images.xml Tue Oct 06 07:48:21 2020 +0000
+++ b/mz_images.xml Wed Oct 21 22:58:11 2020 +0000
b
@@ -1,4 +1,4 @@
-<tool id="cardinal_mz_images" name="MSI mz images" version="@VERSION@.0">
+<tool id="cardinal_mz_images" name="MSI mz images" version="@VERSION@.1">
     <description>
         mass spectrometry imaging m/z heatmaps
     </description>
@@ -28,6 +28,9 @@
 
 @DATA_PROPERTIES@
 
+##in case it exists, remove z-dimension:
+coord(msidata)\$z <- NULL
+
 ##################################### read and filter input m/z ##############
 
 input_list = read.delim("$calibrant_file", header = $calibrant_header, stringsAsFactors = FALSE)