| Previous changeset 7:e93b008c637a (2021-12-02) Next changeset 9:2af7c5086a96 (2022-08-24) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raceid3 commit 455bad7eca54164f95755174904842907846bb42" |
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modified:
macros.xml raceid_trajectory.xml |
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| diff -r e93b008c637a -r c92d0f9338c5 macros.xml --- a/macros.xml Thu Dec 02 16:21:47 2021 +0000 +++ b/macros.xml Mon Dec 20 10:13:20 2021 +0000 |
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| @@ -26,7 +26,8 @@ } </token> <token name="@TOOL_VERSION@">0.2.3</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@VERSION_SUFFIX@">2</token> + <token name="@PROFILE@">21.01</token> <macro name="version_command_config" token_prog="temp" token_cheetah="temp2" token_out="2> '$outlog'"> <version_command><![CDATA[ |
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| diff -r e93b008c637a -r c92d0f9338c5 raceid_trajectory.xml --- a/raceid_trajectory.xml Thu Dec 02 16:21:47 2021 +0000 +++ b/raceid_trajectory.xml Mon Dec 20 10:13:20 2021 +0000 |
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| @@ -1,4 +1,4 @@ -<tool id="raceid_trajectory" name="Lineage computation using StemID" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" > +<tool id="raceid_trajectory" name="Lineage computation using StemID" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>generates lineage from prior clustering</description> <macros> <import>macros.xml</import> @@ -8,7 +8,7 @@ <expand macro="version_command_config" prog="pseudotemporal.R" cheetah="TRAJECTORY_CHEETAH" /> <inputs> - <param name="inputrds" type="data" format="rdata" label="Input RDS" help="This is the output RData file given by the Cluster stage" /> + <param name="inputrds" type="data" format="rds" label="Input RDS" help="This is the output RDS file given by the Cluster stage" /> <section name="projcell" title="Compute transcriptome entropy of each cell" expanded="true" > <param name="knn" type="integer" min="0" value="3" label="KNN" help="Number of nearest neighbours to consider." /> <param name="cthr" type="integer" min="0" value="5" label="Cluster Threshold" help="Clusters to be included in the StemID analysis must have more than this number of cells" /> @@ -44,7 +44,7 @@ </inputs> <outputs> <data name="outpdf" format="pdf" label="${tool.name} on ${on_string}: PDF Report" /> - <data name="outrdat" format="rdata" label="${tool.name} on ${on_string}: RDS" /> + <data name="outrdat" format="rds" label="${tool.name} on ${on_string}: RDS" /> <data name="outlog" format="txt" label="${tool.name} on ${on_string}: Log" > <filter>use_log</filter> </data> |