| Previous changeset 7:4805fe3d8fda (2022-07-06) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lofreq commit 814935de92514901b397ad335e9a43dba728973f |
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modified:
lofreq_call.xml |
| b |
| diff -r 4805fe3d8fda -r b11e8e9c23bf lofreq_call.xml --- a/lofreq_call.xml Wed Jul 06 09:25:57 2022 +0000 +++ b/lofreq_call.xml Wed Oct 02 08:20:25 2024 +0000 |
| b |
| @@ -1,4 +1,4 @@ -<tool id="lofreq_call" name="Call variants" version="@TOOL_VERSION@+galaxy2" profile="18.01"> +<tool id="lofreq_call" name="Call variants" version="@TOOL_VERSION@+galaxy3" profile="18.01"> <description>with LoFreq</description> <macros> <import>macros.xml</import> @@ -91,7 +91,7 @@ ## in case of errors add the log files produced ## by the parallel workers to stderr - || (tool_exit_code=\$? && cat "\$TMPDIR/lofreq2_call_parallel*/*.log" 1>&2 && exit \$tool_exit_code) + || (tool_exit_code=\$? && cat "\$TMPDIR"/lofreq2_call_parallel*/*.log 1>&2 && exit \$tool_exit_code) ## work around a bug in lofreq call-parallel ## https://github.com/CSB5/lofreq/issues/85 |