Previous changeset 0:a994b57c9a7d (2016-07-06) Next changeset 2:af68df7778ce (2016-10-03) |
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit a9550d87541eda8b909e6aef1ad8cbf9e9e20d06 |
modified:
macros.xml |
b |
diff -r a994b57c9a7d -r ddf3dd241f7c macros.xml --- a/macros.xml Wed Jul 06 07:03:54 2016 -0400 +++ b/macros.xml Wed Jul 13 10:57:24 2016 -0400 |
b |
@@ -77,7 +77,6 @@ #set $vcfs_list_file = 'vcfs_list' #for (i,input_file) in enumerate($input_files): #set $input_vcf = 'input' + str($i) + '.vcf.gz' - echo '$input_vcf' >> $vcfs_list_file && #if $input_file.datatype.file_ext == 'vcf' bgzip -c "$input_file" > $input_vcf && bcftools index $input_vcf && @@ -95,6 +94,7 @@ #elif $input_file.datatype.file_ext == 'bcfvcf_bgz' ln -s "$input_file" $input_vcf && #end if + echo '$input_vcf' >> $vcfs_list_file && $input_vcfs.append($input_vcf) #end for ]]> |