Repository 'gmx_sim'
hg clone https://toolshed.g2.bx.psu.edu/repos/chemteam/gmx_sim

Changeset 5:171ce1253b19 (2020-01-10)
Previous changeset 4:cdaed42b4223 (2019-12-18) Next changeset 6:b1061cc2653a (2020-01-21)
Commit message:
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/tools/gromacs commit 3786d1760d039118fa87c5df52d59eec0a5781a3"
modified:
sim.xml
b
diff -r cdaed42b4223 -r 171ce1253b19 sim.xml
--- a/sim.xml Wed Dec 18 15:25:39 2019 -0500
+++ b/sim.xml Fri Jan 10 12:34:53 2020 -0500
[
@@ -1,4 +1,4 @@
-<tool id="gmx_sim" name="GROMACS simulation" version="@VERSION@">
+<tool id="gmx_sim" name="GROMACS simulation" version="@VERSION@.1">
     <description>for system equilibration or data collection</description>
     <macros>
         <import>macros.xml</import>
@@ -243,10 +243,13 @@
         <data name="output6" format="edr" from_work_dir="outp.edr">
             <filter>outps["edr_out"] == 'true'</filter>
         </data>
-        <collection name="output7" type="list">
+        <data name="output7" format="xvg" from_work_dir="outp_pullf.xvg">
+            <filter>outps["xvg_out"] == 'true'</filter>
+        </data>
+        <!-- <collection name="output7" type="list">
             <discover_datasets pattern="(?P&lt;designation&gt;.*)\.xvg" visible="true" directory="." />
             <filter>outps["xvg_out"] == 'true'</filter>
-        </collection>
+        </collection> -->
         <data name="output8" format="binary" from_work_dir="outp.tpr">
             <filter>outps["tpr_out"] == 'true'</filter>
         </data>