| Previous changeset 20:f975c488e8da (2018-07-09) Next changeset 22:d948f3c4e3f7 (2019-02-19) |
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Commit message:
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 3024062b63fdc502b46e4f328083493c2274182a |
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modified:
deepTools_macros.xml plotProfiler.xml test-data/plotPCA_result1.png test-data/plotPCA_result2.png |
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| diff -r f975c488e8da -r 0cd2331b6e4f deepTools_macros.xml --- a/deepTools_macros.xml Mon Jul 09 18:07:57 2018 -0400 +++ b/deepTools_macros.xml Wed Aug 22 16:15:27 2018 -0400 |
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| @@ -1,10 +1,10 @@ <macros> <token name="@THREADS@">--numberOfProcessors "\${GALAXY_SLOTS:-4}"</token> - <token name="@WRAPPER_VERSION@">3.1.0</token> + <token name="@WRAPPER_VERSION@">3.1.2.0</token> <xml name="requirements"> <requirements> - <requirement type="package" version="3.1.0">deeptools</requirement> + <requirement type="package" version="3.1.2">deeptools</requirement> <requirement type="package" version="1.7">samtools</requirement> </requirements> <expand macro="stdio" /> @@ -216,7 +216,7 @@ label="Use a metagene model" help="If set and a BED12 or GTF file or files is used to provide regions, only exons will be used. This is convenient for looking at coverage over mature mRNA transcripts or similar uses where introns should be ignored." /> <param argument="--transcriptID" optional="True" value="transcript" type="text" - label="trascript designator" + label="transcript designator" help="When a GTF file is used to provide regions, only entries with this value as their feature (column 2) will be processed as transcripts. Default: transcript" /> <param argument="--exonID" optional="True" value="exon" type="text" label="exon designator" @@ -654,7 +654,7 @@ </xml> <xml name="output_image_file_format"> - <data format="png" name="outFileName" label="${tool.name} image"> + <data format="png" name="outFileName" label="${tool.name} on ${on_string}: Image"> <change_format> <when input="output.outFileFormat" value="pdf" format="pdf" /> <when input="output.outFileFormat" value="svg" format="svg" /> @@ -665,7 +665,7 @@ </xml> <xml name="output_image_file_format_not_nested"> - <data format="png" name="outFileName" label="${tool.name} image"> + <data format="png" name="outFileName" label="${tool.name} on ${on_string}: Image"> <change_format> <when input="outFileFormat" value="pdf" format="pdf" /> <when input="outFileFormat" value="svg" format="svg" /> |
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| diff -r f975c488e8da -r 0cd2331b6e4f plotProfiler.xml --- a/plotProfiler.xml Mon Jul 09 18:07:57 2018 -0400 +++ b/plotProfiler.xml Wed Aug 22 16:15:27 2018 -0400 |
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| @@ -1,4 +1,4 @@ -<tool id="deeptools_plot_profile" name="plotProfile" version="@WRAPPER_VERSION@.0"> +<tool id="deeptools_plot_profile" name="plotProfile" version="@WRAPPER_VERSION@.0" profile="18.01"> <description> creates a profile plot for score distributions across genomic regions </description> |
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| diff -r f975c488e8da -r 0cd2331b6e4f test-data/plotPCA_result1.png |
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| Binary file test-data/plotPCA_result1.png has changed |
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| diff -r f975c488e8da -r 0cd2331b6e4f test-data/plotPCA_result2.png |
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| Binary file test-data/plotPCA_result2.png has changed |
