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Commit message:
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a" |
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added:
cdo_operations.xml macros.xml macros_info.xml macros_operations.xml test-data/WMI_Lear.nc test-data/WMI_Lear_addc.nc test-data/WMI_Lear_copy.nc test-data/WMI_Lear_expr.nc test-data/WMI_Lear_griddes.txt test-data/WMI_Lear_invertlat.nc test-data/WMI_Lear_names.txt test-data/WMI_Lear_sellonlatbox.nc test-data/WMI_Lear_sellonlatbox_units.nc test-data/WMI_Lear_showdate.txt test-data/WMI_Lear_timesteps.nc test-data/attributes.txt test-data/drops1.nc test-data/drops2.nc test-data/drops_cat.nc test-data/lat_long.nc test-data/lat_long_modified.nc test-data/latitude.nc test-data/latitude3.nc test-data/latitude_diff.txt test-data/latitude_modified.nc test-data/longitude.nc test-data/longitude.txt test-data/outfile_latitude.nc test-data/split_latitude.nc test-data/timeseries.nc test-data/timeseries_sub.nc test-data/timeseries_timavg.nc |
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| diff -r 000000000000 -r d5355f6fa02b cdo_operations.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cdo_operations.xml Sat Jan 15 23:21:03 2022 +0000 |
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| b'@@ -0,0 +1,293 @@\n+<tool id="cdo_operations" name="CDO Operations" profile="20.05" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">\n+ <description>Climate Data Manipulation Operators operations for standard processing of climate and NWP model output.</description>\n+ <macros>\n+ <import>macros.xml</import>\n+ <import>macros_operations.xml</import>\n+ </macros>\n+ <expand macro="edam_ontology"/>\n+ <expand macro="cdo_requirements"/>\n+ <expand macro="cdo_stdio"/>\n+ <command detect_errors="exit_code"><![CDATA[\n+ mkdir output_dir &&\n+ cdo \n+ #for $i, $cdo_option in enumerate( $section_option )\n+ #if $cdo_option.option_type.add_opt == \'-f\'\n+ $cdo_option.option_type.add_opt $cdo_option.option_type.output_format\n+ #elif $cdo_option.option_type.add_opt == \'-g\'\n+ $cdo_option.option_type.add_opt $cdo_option.option_type.grid\n+ #elif $cdo_option.option_type.add_opt == \'-gf\'\n+ $cdo_option.option_type.add_opt $cdo_option.option_type.gridfile\n+ #elif $cdo_option.option_type.add_opt == \'-m\'\n+ $cdo_option.option_type.add_opt $cdo_option.option_type.missval\n+ #elif $cdo_option.option_type.add_opt == \'--percentile\'\n+ $cdo_option.option_type.add_opt $cdo_option.option_type.percentile\n+ #elif $cdo_option.option_type.add_opt == \'--seed\'\n+ $cdo_option.option_type.add_opt $cdo_option.option_type.seed\n+ #else\n+ $cdo_option.option_type.add_opt\n+ #end if\n+ #end for\n+ #for $i, $cdo_oper in enumerate( $section_operators )\n+ #if $cdo_oper.operator.opt == \'duplicate\'\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.ndup\n+ #elif $cdo_oper.operator.opt == \'addc\' or $cdo_oper.operator.opt == \'subc\' or $cdo_oper.operator.opt == \'mulc\' or $cdo_oper.operator.opt == \'divc\'\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.const_value\n+\t #elif $cdo_oper.operator.opt == \'ens\' or $cdo_oper.operator.opt == \'zon\' or $cdo_oper.operator.opt == \'tim\' or $cdo_oper.operator.opt == \'vert\' or $cdo_oper.operator.opt == \'day\' or $cdo_oper.operator.opt == \'year\' or $cdo_oper.operator.opt == \'mon\' or $cdo_oper.operator.opt == \'seas\' or $cdo_oper.operator.opt == \'fld\'\n+ -\'${cdo_oper.operator.opt}${cdo_oper.operator.stat}\'\n+\t #elif $cdo_oper.operator.opt == \'sp2gp\' or $cdo_oper.operator.opt == \'gp2sp\'\n+ #if $cdo_oper.operator.trunc > 0\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.trunc\n+ #else\n+ -\'$cdo_oper.operator.opt\'\n+ #end if\n+ #elif $cdo_oper.operator.opt == \'collgrid\'\n+ #if str($cdo_oper.operator.nx)\n+ #if str($cdo_oper.operator.names)\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.nx,\'$cdo_oper.operator.names\'\n+ #else\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.nx\n+ #end if\n+ #else\n+ -\'$cdo_oper.operator.opt\'\n+ #end if\n+ #elif $cdo_oper.operator.opt == \'distgrid\'\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.nx,$cdo_oper.operator.ny\n+ #elif $cdo_oper.operator.opt == \'splitsel\'\n+ #if str($cdo_oper.operator.noffset)\n+ #if str($cdo_oper.operator.nskip)\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.nsets,$cdo_oper.operator.noffset,$cdo_oper.operator.nskip\n+ #else\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.nsets,$cdo_oper.operator.noffset\n+ #end if\n+ #else\n+ -\'$cdo_oper.operator.opt\',$cdo_oper.operator.nsets\n+ #end if\n+ #elif $cdo_oper.oper'..b' <element name="outfile.netcdf" ftype="netcdf" file="WMI_Lear_addc.nc" compare="sim_size" delta="50"/>\n+ </output_collection>\n+ </test>\n+ <test>\n+ <conditional name="operator">\n+ <param name="opt" value="expr" />\n+ <param name="params" value="Drops2=1000*exp(1+Drops)" />\n+ <param name="add_file" value="WMI_Lear.nc" ftype="netcdf" />\n+ </conditional>\n+ <output_collection name="output_files" type="list" count="1">\n+ <element name="outfile.netcdf" ftype="netcdf" file="WMI_Lear_expr.nc" compare="sim_size" delta="50"/>\n+ </output_collection>\n+ </test>\n+ <test>\n+ <repeat name="section_operators">\n+ <conditional name="operator">\n+ <param name="opt" value="selname" />\n+ <param name="params" value="CLEAR_SKY_BHI" />\n+ </conditional>\n+ </repeat>\n+ <repeat name="section_operators">\n+ <conditional name="operator">\n+ <param name="opt" value="tim" />\n+ <param name="stat" value="avg" />\n+ <param name="add_file" value="timeseries.nc" ftype="netcdf" />\n+ </conditional>\n+ </repeat>\n+ <output_collection name="output_files" type="list" count="1">\n+ <element name="outfile.netcdf" ftype="netcdf" file="timeseries_timavg.nc" compare="sim_size" delta="50"/>\n+ </output_collection>\n+ </test>\n+ <test>\n+ <repeat name="section_operators">\n+ <conditional name="operator">\n+ <param name="opt" value="sub" />\n+ <param name="add_file" value="timeseries.nc" ftype="netcdf" />\n+ </conditional>\n+ </repeat>\n+ <repeat name="section_operators">\n+ <conditional name="operator">\n+ <param name="opt" value="addc" />\n+ <param name="const_value" value="10.5" />\n+ <param name="add_file" value="timeseries.nc" ftype="netcdf" />\n+ </conditional>\n+ </repeat>\n+ <output_collection name="output_files" type="list" count="1">\n+ <element name="outfile.netcdf" ftype="netcdf" file="timeseries_sub.nc" compare="sim_size" delta="50"/>\n+ </output_collection>\n+ </test>\n+ <test>\n+ <repeat name="section_operators">\n+ <conditional name="operator">\n+ <param name="opt" value="sellonlatbox" />\n+ <param name="params" value="-10,10,60,70" />\n+ </conditional>\n+ </repeat>\n+ <repeat name="section_operators">\n+ <conditional name="operator">\n+ <param name="opt" value="setattribute" />\n+ <param name="attr_file" value="attributes.txt" />\n+ <param name="add_file" value="WMI_Lear.nc" ftype="netcdf" />\n+ </conditional>\n+ </repeat>\n+ <output_collection name="output_files" type="list" count="1">\n+ <element name="outfile.netcdf" ftype="netcdf" file="WMI_Lear_sellonlatbox_units.nc" compare="sim_size" delta="50"/>\n+ </output_collection>\n+ </test>\n+ </tests>\n+ <help><![CDATA[\n+\n+**Climate Data Operators (CDO)**\n+=======================================================================================================\n+\n+This tool is a wrapper to the Climate Data Operators (CDO) for all operators manipulating input files and creating a new output file.\n+\n+- CDO is a collection of command line Operators to manipulate and analyse Climate and NWP model Data.\n+- There are more than 600 operators available.\n+\n+- `CDO online documentation <https://code.mpimet.mpg.de/projects/cdo/>`_.\n+\n+ ]]> </help>\n+ <expand macro="citations"/>\n+</tool>\n' |
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| diff -r 000000000000 -r d5355f6fa02b macros.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Sat Jan 15 23:21:03 2022 +0000 |
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| @@ -0,0 +1,33 @@ +<macros> + <token name="@TOOL_VERSION@">2.0.0</token> + <token name="@VERSION_SUFFIX@">0</token> + <xml name="cdo_requirements"> + <requirements> + <requirement type="package" version="@TOOL_VERSION@">cdo</requirement> + </requirements> + </xml> + <xml name="edam_ontology"> + <edam_topics> + <edam_topic>topic_3318</edam_topic> + </edam_topics> + <edam_operations> + <edam_operation>operation_3438</edam_operation> + </edam_operations> + </xml> + <xml name="cdo_stdio"> + <stdio> + <!-- Anything other than zero or one is an error --> + <exit_code range="2:" /> + <exit_code range=":-1"/> + <!-- In case the return code has not been set propery check stderr too --> + <regex match="Error" /> + <regex match="Exception" /> + <regex match="Abort" /> + </stdio> + </xml> + <xml name="citations"> + <citations> + <citation type="doi">10.5281/zenodo.3539275</citation> + </citations> + </xml> +</macros> |
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| diff -r 000000000000 -r d5355f6fa02b macros_info.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros_info.xml Sat Jan 15 23:21:03 2022 +0000 |
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| @@ -0,0 +1,81 @@ +<macros> + <xml name="operator_information"> + <param name="main_infile" type="data" label="Input file" format="netcdf"/> + <conditional name="information"> + <param name="opt" type="select" label="Select cdo operator" multiple="false"> + <option value="info">info (Dataset information listed by parameter identifier)</option> + <option value="infon">infon (Dataset information listed by parameter name)</option> + <option value="map">map (Dataset information and simple map)</option> + <option value="sinfo">sinfo (Short information listed by parameter identifier)</option> + <option value="sinfon">sinfon (Short information listed by parameter name)</option> + <option value="diff">diff (Compare two datasets listed by parameter identifier)</option> + <option value="diffn">diffn (Compare two datasets listed by parameter name)</option> + <option value="npar">npar (Number of parameters)</option> + <option value="nlevel">nlevel (Number of levels)</option> + <option value="nyear">nyear (Number of years)</option> + <option value="nmon">nmon (Number of months)</option> + <option value="ndate">ndate (Number of dates)</option> + <option value="ntime">ntime (Number of timesteps)</option> + <option value="ngridpoints">ngridpoints (Number of gridpoints)</option> + <option value="ngrids">ngrids (Number of horizontal grids)</option> + <option value="showformat">showformat (Show file format)</option> + <option value="showcode">showcode (Show code numbers)</option> + <option value="showname">showname (Show variable names)</option> + <option value="showstdname">showstdname (Show standard names)</option> + <option value="showlevel">showlevel (Show levels)</option> + <option value="showltype">showltype (Show GRIB level types)</option> + <option value="showyear">showyear (Show years)</option> + <option value="showmon">showmon (Show months)</option> + <option value="showdate">showdate (Show date information)</option> + <option value="showtime">showtime (Show time information)</option> + <option value="showtimestamp">showtimestamp (Show timestamp)</option> + <option value="showattribute">showattribute (Show a global attribute or a variable attribute)</option> + <option value="partab">partab (Parameter table)</option> + <option value="codetab">codetab (Parameter code table)</option> + <option value="griddes">griddes (Grid description)</option> + <option value="zaxisdes">zaxisdes (Z-axis description)</option> + <option value="vct">vct (Vertical coordinate table)</option> + </param> + <when value="info"/> + <when value="infon"/> + <when value="map"/> + <when value="sinfo"/> + <when value="sinfon"/> + <when value="diff"> + <param name="secondary_infile" type="data" label="Input file" format="netcdf"/> + </when> + <when value="diffn"> + <param name="secondary_infile" type="data" label="Input file" format="netcdf"/> + </when> + <when value="npar"/> + <when value="nlevel"/> + <when value="nyear"/> + <when value="nmon"/> + <when value="ndate"/> + <when value="ntime"/> + <when value="ngridpoints"/> + <when value="ngrids"/> + <when value="showformat"/> + <when value="showcode"/> + <when value="showname"/> + <when value="showstdname"/> + <when value="showlevel"/> + <when value="showltype"/> + <when value="showyear"/> + <when value="showmon"/> + <when value="showdate"/> + <when value="showtime"/> + <when value="showtimestamp"/> + <when value="showattribute"> + <repeat name="attributes" title="List of attributes"> + <param name="attribute" type="text" label="Global or variable attribute name"/> + </repeat> + </when> + <when value="partab"/> + <when value="codetab"/> + <when value="griddes"/> + <when value="zaxisdes"/> + <when value="vct"/> + </conditional> + </xml> +</macros> |
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| diff -r 000000000000 -r d5355f6fa02b macros_operations.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros_operations.xml Sat Jan 15 23:21:03 2022 +0000 |
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| b'@@ -0,0 +1,336 @@\n+<macros>\n+ <xml name="stat_selection">\n+ <param name="stat" type="select" label="Select statistical function" multiple="false">\n+ <option value="min">minimum</option>\n+ <option value="max">maximum</option>\n+ <option value="sum">sum</option>\n+ <option value="mean">mean</option>\n+ <option value="avg">average</option>\n+ <option value="var">variance</option>\n+ <option value="std">standard deviation</option>\n+ </param>\n+ </xml>\n+ <xml name="add_cdo_input">\n+ <param name="add_file" type="data" optional="true" label="Additional input file" format="netcdf"/>\n+ </xml>\n+ <xml name="cdo_option">\n+ <conditional name="option_type">\n+ <param name="add_opt" type="select" label="Provide cdo options" multiple="false">\n+ <option value="-a">Generate an absolute time axis (-a)</option>\n+ <option value="--cmor">CMOR conform NetCDF output (--cmor)</option>\n+ <option value="-f">-Output format (-f format)</option>\n+ <option value="-g">-g grid</option>\n+ <option value="-gf">-g grid filename</option>\n+ <option value="-M">-Indicate that the I/O streams have missing values (-M)</option>\n+ <option value="-m">Set the default missing value. Default is-9e+33 (-m missval)</option>\n+ <option value="--percentile">Percentile method (--percentile method)</option>\n+ <option value="--reduce_dim">Reduce NetCDF dimensions (--reduce_dim)</option>\n+ <option value="-R">Convert GRIB1 data from reduced to regular grid (-R)</option>\n+ <option value="--seed">Seed for a new sequence of pseudo-random numbers (--seed seed)</option>\n+ <option value="--sortname">Alphanumeric sorting of NetCDF parameter names (--sortname)</option>\n+ <option value="-r">Generate a relative time axis (-r)</option>\n+ </param>\n+ <when value="-a"/>\n+ <when value="--cmor"/>\n+ <when value="-f">\n+ <param name="output_format" type="select" label="Select output format" multiple="false">\n+ <option value="nc4">NetCDF-4 (HDF5)</option>\n+ <option value="nc4c">NetCDF-4 classic</option>\n+ <option value="nc5">NetCDF version 5</option>\n+ </param>\n+ </when>\n+ <when value="-g">\n+ <param name="grid" type="text" label="Grid" help="(option -g grid)"/>\n+ </when>\n+ <when value="-gf">\n+ <param name="gridfile" type="data" label="Grid file" help="(option -g gridfile)" format="txt"/>\n+ </when>\n+ <when value="-M"/>\n+ <when value="-m">\n+ <param name="missval" type="float" value="-9e+33" label="Set the default missing value"/>\n+ </when>\n+ <when value="--percentile">\n+ <param name="percentile" type="select" label="Percentile method">\n+ <option value="nrank">nrank</option>\n+ <option value="nist">nist</option>\n+ <option value="rtype8">rtype8</option>\n+ <option value="numpy">numpy</option>\n+ <option value="numpy_lower">numpy_lower</option>\n+ <option value="numpy_higher">numpy_higher</option>\n+ <option value="numpy_nearest">numpy_nearest</option>\n+ </param>\n+ </when>\n+ <when value="--reduce_dim"/>\n+ <when value="-R"/>\n+ <when value="--seed">\n+ <param name="seed" type="float" value="0.0" label="Seed for a new sequence of pseudo-random numbers"/>\n+ </when>\n+ <when value="--sortname"/>\n+ <when value="-r"/>\n+ </conditional>\n+ </xml>\n+ <xml name="cdo_operator">\n+ '..b' <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="mulc">\n+ <param name="const_value" type="float" label="Constant value to scale the fields" value="1"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="divc">\n+ <param name="const_value" type="float" label="Constant value to scale the fields" value="1"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="expr">\n+ <param name="params" type="text" value="" label="Expression for evaluation"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="ml2pl">\n+ <param name="params" type="text" value="" label="Pressure levels (comma separated)"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="ml2hl">\n+ <param name="params" type="text" value="" label="Height levels (comma separated)"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="intlevel">\n+ <param name="params" type="text" value="" label="Levels (comma separated)"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="sp2gp">\n+ <param name="trunc" type="integer" optional="true" value="" label="New spectral resolution"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="gp2sp">\n+ <param name="trunc" type="integer" optional="true" label="New spectral resolution"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="ens">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="zon">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="tim">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="vert">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="day">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="year">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="mon">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="seas">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="fld">\n+ <expand macro="stat_selection" />\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="add">\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="sub">\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="mul">\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="div">\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="min">\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="max">\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ <when value="setattribute">\n+ <param name="attr_file" type="data" format="txt" label="Text file containing the list of attributes (one per line)"/>\n+ <expand macro="add_cdo_input"/>\n+ </when>\n+ </conditional>\n+ </xml>\n+</macros>\n' |
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| diff -r 000000000000 -r d5355f6fa02b test-data/WMI_Lear_addc.nc |
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| diff -r 000000000000 -r d5355f6fa02b test-data/WMI_Lear_griddes.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/WMI_Lear_griddes.txt Sat Jan 15 23:21:03 2022 +0000 |
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| @@ -0,0 +1,6 @@ +# +# gridID 1 +# +gridtype = generic +gridsize = 1 +cdo griddes: Processed 10 variables [0.00s 22MB]. |
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| diff -r 000000000000 -r d5355f6fa02b test-data/WMI_Lear_invertlat.nc |
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| diff -r 000000000000 -r d5355f6fa02b test-data/WMI_Lear_names.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/WMI_Lear_names.txt Sat Jan 15 23:21:03 2022 +0000 |
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| @@ -0,0 +1,2 @@ + altitude latitude longitude pressure tdry dp mr wspd wdir Drops +cdo showname: Processed 10 variables [0.00s 22MB]. |
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| diff -r 000000000000 -r d5355f6fa02b test-data/WMI_Lear_sellonlatbox.nc |
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| diff -r 000000000000 -r d5355f6fa02b test-data/WMI_Lear_showdate.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/WMI_Lear_showdate.txt Sat Jan 15 23:21:03 2022 +0000 |
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| @@ -0,0 +1,2 @@ + 2003-07-06 +cdo showdate: Processed 10 variables over 180 timesteps [0.00s 22MB]. |
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| @@ -0,0 +1,2 @@ +Drops@units="number of elements" +Drops@long_name = "Accumulated # of sonde drops" |
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| diff -r 000000000000 -r d5355f6fa02b test-data/latitude_diff.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/latitude_diff.txt Sat Jan 15 23:21:03 2022 +0000 |
| [ |
| b'@@ -0,0 +1,183 @@\n+ -1 : Date Time Level Gridsize Miss : Minimum Mean Maximum : Parameter ID\n+ 1 : 2003-07-06 06:30:13 0 1 0 : 43.585 : -1 \n+ 2 : 2003-07-06 06:30:19 0 1 0 : 43.585 : -1 \n+ 3 : 2003-07-06 06:30:29 0 1 0 : 43.585 : -1 \n+ 4 : 2003-07-06 06:30:39 0 1 0 : 43.585 : -1 \n+ 5 : 2003-07-06 06:30:49 0 1 0 : 43.585 : -1 \n+ 6 : 2003-07-06 06:30:59 0 1 0 : 43.584 : -1 \n+ 7 : 2003-07-06 06:31:09 0 1 0 : 43.584 : -1 \n+ 8 : 2003-07-06 06:31:19 0 1 0 : 43.584 : -1 \n+ 9 : 2003-07-06 06:31:29 0 1 0 : 43.584 : -1 \n+ 10 : 2003-07-06 06:31:39 0 1 0 : 43.584 : -1 \n+ 11 : 2003-07-06 06:31:49 0 1 0 : 43.583 : -1 \n+ 12 : 2003-07-06 06:31:59 0 1 0 : 43.583 : -1 \n+ 13 : 2003-07-06 06:32:09 0 1 0 : 43.583 : -1 \n+ 14 : 2003-07-06 06:32:19 0 1 0 : 43.583 : -1 \n+ 15 : 2003-07-06 06:32:29 0 1 0 : 43.583 : -1 \n+ 16 : 2003-07-06 06:32:39 0 1 0 : 43.584 : -1 \n+ 17 : 2003-07-06 06:32:49 0 1 0 : 43.584 : -1 \n+ 18 : 2003-07-06 06:32:59 0 1 0 : 43.585 : -1 \n+ 19 : 2003-07-06 06:33:09 0 1 0 : 43.585 : -1 \n+ 20 : 2003-07-06 06:33:19 0 1 0 : 43.586 : -1 \n+ 21 : 2003-07-06 06:33:29 0 1 0 : 43.587 : -1 \n+ 22 : 2003-07-06 06:33:39 0 1 0 : 43.587 : -1 \n+ 23 : 2003-07-06 06:33:49 0 1 0 : 43.588 : -1 \n+ 24 : 2003-07-06 06:33:59 0 1 0 : 43.589 : -1 \n+ 25 : 2003-07-06 06:34:09 0 1 0 : 43.589 : -1 \n+ 26 : 2003-07-06 06:34:19 0 1 0 : 43.590 : -1 \n+ 27 : 2003-07-06 06:34:29 0 1 0 : 43.591 : -1 \n+ 28 : 2003-07-06 06:34:39 0 1 0 : 43.591 : -1 \n+ 29 : 2003-07-06 06:34:49 0 1 0 : 43.592 : -1 \n+ 30 : 2003-07-06 06:34:59 0 1 0 : 43.592 : -1 \n+ 31 : 2003-07-06 06:35:09 0 1 0 : 43.593 : -1 \n+ 32 : 2003-07-06 06:35:19 0 1 0 : 43.593 : -1 \n+ 33 : 2003-07-06 06:35:29 0 1 0 : 43.593 : -1 \n+ 34 : 2003-07-06 06:35:39 0 1 0 : 43.593 : -1 \n+ 35 : 2003-07-06 06:35:49 0 1 0 : 43.593 : -1 \n+ 36 : 2003-07-06 06'..b' 1 0 : 42.628 : -1 \n+ 147 : 2003-07-06 06:54:29 0 1 0 : 42.618 : -1 \n+ 148 : 2003-07-06 06:54:39 0 1 0 : 42.608 : -1 \n+ 149 : 2003-07-06 06:54:49 0 1 0 : 42.601 : -1 \n+ 150 : 2003-07-06 06:54:59 0 1 0 : 42.589 : -1 \n+ 151 : 2003-07-06 06:55:09 0 1 0 : 42.577 : -1 \n+ 152 : 2003-07-06 06:55:19 0 1 0 : 42.568 : -1 \n+ 153 : 2003-07-06 06:55:29 0 1 0 : 42.561 : -1 \n+ 154 : 2003-07-06 06:55:39 0 1 0 : 42.549 : -1 \n+ 155 : 2003-07-06 06:55:49 0 1 0 : 42.536 : -1 \n+ 156 : 2003-07-06 06:55:59 0 1 0 : 42.527 : -1 \n+ 157 : 2003-07-06 06:56:09 0 1 0 : 42.518 : -1 \n+ 158 : 2003-07-06 06:56:19 0 1 0 : 42.507 : -1 \n+ 159 : 2003-07-06 06:56:29 0 1 0 : 42.496 : -1 \n+ 160 : 2003-07-06 06:56:39 0 1 0 : 42.485 : -1 \n+ 161 : 2003-07-06 06:56:49 0 1 0 : 42.477 : -1 \n+ 162 : 2003-07-06 06:56:59 0 1 0 : 42.467 : -1 \n+ 163 : 2003-07-06 06:57:09 0 1 0 : 42.458 : -1 \n+ 164 : 2003-07-06 06:57:19 0 1 0 : 42.452 : -1 \n+ 165 : 2003-07-06 06:57:29 0 1 0 : 42.442 : -1 \n+ 166 : 2003-07-06 06:57:39 0 1 0 : 42.434 : -1 \n+ 167 : 2003-07-06 06:57:49 0 1 0 : 42.425 : -1 \n+ 168 : 2003-07-06 06:57:59 0 1 0 : 42.416 : -1 \n+ 169 : 2003-07-06 06:58:09 0 1 0 : 42.409 : -1 \n+ 170 : 2003-07-06 06:58:19 0 1 0 : 42.400 : -1 \n+ 171 : 2003-07-06 06:58:29 0 1 0 : 42.392 : -1 \n+ 172 : 2003-07-06 06:58:39 0 1 0 : 42.384 : -1 \n+ 173 : 2003-07-06 06:58:49 0 1 0 : 42.374 : -1 \n+ 174 : 2003-07-06 06:58:59 0 1 0 : 42.363 : -1 \n+ 175 : 2003-07-06 06:59:09 0 1 0 : 42.355 : -1 \n+ 176 : 2003-07-06 06:59:19 0 1 0 : 42.348 : -1 \n+ 177 : 2003-07-06 06:59:29 0 1 0 : 42.340 : -1 \n+ 178 : 2003-07-06 06:59:39 0 1 0 : 42.333 : -1 \n+ 179 : 2003-07-06 06:59:49 0 1 0 : 42.326 : -1 \n+ 180 : 2003-07-06 06:59:59 0 1 0 : 42.321 : -1 \n+ : Date Time Level Gridsize Miss : Minimum Mean Maximum : Parameter ID\n+cdo info: Processed 180 values from 1 variable over 180 timesteps [0.00s 22MB].\n' |
| b |
| diff -r 000000000000 -r d5355f6fa02b test-data/latitude_modified.nc |
| b |
| Binary file test-data/latitude_modified.nc has changed |
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| diff -r 000000000000 -r d5355f6fa02b test-data/longitude.nc |
| b |
| Binary file test-data/longitude.nc has changed |
| b |
| diff -r 000000000000 -r d5355f6fa02b test-data/longitude.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/longitude.txt Sat Jan 15 23:21:03 2022 +0000 |
| [ |
| b'@@ -0,0 +1,183 @@\n+ -1 : Date Time Level Gridsize Miss : Minimum Mean Maximum : Parameter ID\n+ 1 : 2003-07-06 06:30:13 0 1 0 : -96.733 : -1 \n+ 2 : 2003-07-06 06:30:19 0 1 0 : -96.733 : -1 \n+ 3 : 2003-07-06 06:30:29 0 1 0 : -96.733 : -1 \n+ 4 : 2003-07-06 06:30:39 0 1 0 : -96.733 : -1 \n+ 5 : 2003-07-06 06:30:49 0 1 0 : -96.733 : -1 \n+ 6 : 2003-07-06 06:30:59 0 1 0 : -96.734 : -1 \n+ 7 : 2003-07-06 06:31:09 0 1 0 : -96.734 : -1 \n+ 8 : 2003-07-06 06:31:19 0 1 0 : -96.735 : -1 \n+ 9 : 2003-07-06 06:31:29 0 1 0 : -96.735 : -1 \n+ 10 : 2003-07-06 06:31:39 0 1 0 : -96.735 : -1 \n+ 11 : 2003-07-06 06:31:49 0 1 0 : -96.736 : -1 \n+ 12 : 2003-07-06 06:31:59 0 1 0 : -96.737 : -1 \n+ 13 : 2003-07-06 06:32:09 0 1 0 : -96.737 : -1 \n+ 14 : 2003-07-06 06:32:19 0 1 0 : -96.737 : -1 \n+ 15 : 2003-07-06 06:32:29 0 1 0 : -96.738 : -1 \n+ 16 : 2003-07-06 06:32:39 0 1 0 : -96.738 : -1 \n+ 17 : 2003-07-06 06:32:49 0 1 0 : -96.738 : -1 \n+ 18 : 2003-07-06 06:32:59 0 1 0 : -96.739 : -1 \n+ 19 : 2003-07-06 06:33:09 0 1 0 : -96.739 : -1 \n+ 20 : 2003-07-06 06:33:19 0 1 0 : -96.740 : -1 \n+ 21 : 2003-07-06 06:33:29 0 1 0 : -96.740 : -1 \n+ 22 : 2003-07-06 06:33:39 0 1 0 : -96.740 : -1 \n+ 23 : 2003-07-06 06:33:49 0 1 0 : -96.741 : -1 \n+ 24 : 2003-07-06 06:33:59 0 1 0 : -96.741 : -1 \n+ 25 : 2003-07-06 06:34:09 0 1 0 : -96.742 : -1 \n+ 26 : 2003-07-06 06:34:19 0 1 0 : -96.742 : -1 \n+ 27 : 2003-07-06 06:34:29 0 1 0 : -96.743 : -1 \n+ 28 : 2003-07-06 06:34:39 0 1 0 : -96.743 : -1 \n+ 29 : 2003-07-06 06:34:49 0 1 0 : -96.743 : -1 \n+ 30 : 2003-07-06 06:34:59 0 1 0 : -96.744 : -1 \n+ 31 : 2003-07-06 06:35:09 0 1 0 : -96.744 : -1 \n+ 32 : 2003-07-06 06:35:19 0 1 0 : -96.744 : -1 \n+ 33 : 2003-07-06 06:35:29 0 1 0 : -96.745 : -1 \n+ 34 : 2003-07-06 06:35:39 0 1 0 : -96.745 : -1 \n+ 35 : 2003-07-06 06:35:49 0 1 0 : -96.745 : -1 \n+ 36 : 2003-07-06 06'..b' 1 0 : -96.862 : -1 \n+ 147 : 2003-07-06 06:54:29 0 1 0 : -96.845 : -1 \n+ 148 : 2003-07-06 06:54:39 0 1 0 : -96.828 : -1 \n+ 149 : 2003-07-06 06:54:49 0 1 0 : -96.815 : -1 \n+ 150 : 2003-07-06 06:54:59 0 1 0 : -96.794 : -1 \n+ 151 : 2003-07-06 06:55:09 0 1 0 : -96.773 : -1 \n+ 152 : 2003-07-06 06:55:19 0 1 0 : -96.755 : -1 \n+ 153 : 2003-07-06 06:55:29 0 1 0 : -96.744 : -1 \n+ 154 : 2003-07-06 06:55:39 0 1 0 : -96.723 : -1 \n+ 155 : 2003-07-06 06:55:49 0 1 0 : -96.703 : -1 \n+ 156 : 2003-07-06 06:55:59 0 1 0 : -96.688 : -1 \n+ 157 : 2003-07-06 06:56:09 0 1 0 : -96.672 : -1 \n+ 158 : 2003-07-06 06:56:19 0 1 0 : -96.653 : -1 \n+ 159 : 2003-07-06 06:56:29 0 1 0 : -96.636 : -1 \n+ 160 : 2003-07-06 06:56:39 0 1 0 : -96.617 : -1 \n+ 161 : 2003-07-06 06:56:49 0 1 0 : -96.603 : -1 \n+ 162 : 2003-07-06 06:56:59 0 1 0 : -96.583 : -1 \n+ 163 : 2003-07-06 06:57:09 0 1 0 : -96.562 : -1 \n+ 164 : 2003-07-06 06:57:19 0 1 0 : -96.550 : -1 \n+ 165 : 2003-07-06 06:57:29 0 1 0 : -96.525 : -1 \n+ 166 : 2003-07-06 06:57:39 0 1 0 : -96.505 : -1 \n+ 167 : 2003-07-06 06:57:49 0 1 0 : -96.483 : -1 \n+ 168 : 2003-07-06 06:57:59 0 1 0 : -96.464 : -1 \n+ 169 : 2003-07-06 06:58:09 0 1 0 : -96.446 : -1 \n+ 170 : 2003-07-06 06:58:19 0 1 0 : -96.427 : -1 \n+ 171 : 2003-07-06 06:58:29 0 1 0 : -96.407 : -1 \n+ 172 : 2003-07-06 06:58:39 0 1 0 : -96.390 : -1 \n+ 173 : 2003-07-06 06:58:49 0 1 0 : -96.369 : -1 \n+ 174 : 2003-07-06 06:58:59 0 1 0 : -96.349 : -1 \n+ 175 : 2003-07-06 06:59:09 0 1 0 : -96.331 : -1 \n+ 176 : 2003-07-06 06:59:19 0 1 0 : -96.313 : -1 \n+ 177 : 2003-07-06 06:59:29 0 1 0 : -96.289 : -1 \n+ 178 : 2003-07-06 06:59:39 0 1 0 : -96.266 : -1 \n+ 179 : 2003-07-06 06:59:49 0 1 0 : -96.244 : -1 \n+ 180 : 2003-07-06 06:59:59 0 1 0 : -96.227 : -1 \n+ : Date Time Level Gridsize Miss : Minimum Mean Maximum : Parameter ID\n+cdo info: Processed 180 values from 1 variable over 180 timesteps [0.00s 22MB].\n' |
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| diff -r 000000000000 -r d5355f6fa02b test-data/outfile_latitude.nc |
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| Binary file test-data/outfile_latitude.nc has changed |
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| diff -r 000000000000 -r d5355f6fa02b test-data/split_latitude.nc |
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| Binary file test-data/split_latitude.nc has changed |
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| diff -r 000000000000 -r d5355f6fa02b test-data/timeseries.nc |
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| Binary file test-data/timeseries.nc has changed |
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| diff -r 000000000000 -r d5355f6fa02b test-data/timeseries_sub.nc |
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| Binary file test-data/timeseries_sub.nc has changed |
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| diff -r 000000000000 -r d5355f6fa02b test-data/timeseries_timavg.nc |
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| Binary file test-data/timeseries_timavg.nc has changed |