| Previous changeset 9:e3f170cc4f95 (2019-08-16) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 1232893782204bb041dd6ed46711295cb0bfc03f" |
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modified:
varscan.py |
| b |
| diff -r e3f170cc4f95 -r db94eadb92c1 varscan.py --- a/varscan.py Fri Aug 16 15:50:25 2019 -0400 +++ b/varscan.py Sat Dec 04 22:23:16 2021 +0000 |
| b |
| @@ -358,8 +358,7 @@ self.call, self.error ) else: - msg_header = '{0} failed.\n' - 'No further information about this error is available.\n\n'.format( + msg_header = '{0} failed.\nNo further information about this error is available.\n\n'.format( self.call ) return msg_header + self.message @@ -1045,8 +1044,8 @@ if mmqs_diff > max_mmqs_diff: record.filter.add('MMQSdiff') if ( - 1 - - alt_stats.avg_clipped_len + 1 + - alt_stats.avg_clipped_len / ref_stats.avg_clipped_len ) > max_relative_len_diff: record.filter.add('ReadLenDiff') |