| Previous changeset 13:8992d258e42f (2018-06-22) Next changeset 15:dc492eb6a4fc (2019-01-28) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit fed02ef07e0a45f0d5a89cdca364607ab8da6cf9 |
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modified:
emboss_seqret.xml macros.xml |
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| diff -r 8992d258e42f -r 2e0fb4bc860e emboss_seqret.xml --- a/emboss_seqret.xml Fri Jun 22 03:24:47 2018 -0400 +++ b/emboss_seqret.xml Mon Jan 28 11:22:18 2019 -0500 |
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| @@ -4,6 +4,7 @@ <import>macros.xml</import> </macros> <expand macro="requirements" /> + <expand macro="stdio" /> <code file="emboss_format_corrector.py" /> <command>seqret -sequence '$input1' -outseq '$out_file1' -feature $feature -firstonly $firstonly -osformat2 $out_format1 -auto</command> <inputs> |
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| diff -r 8992d258e42f -r 2e0fb4bc860e macros.xml --- a/macros.xml Fri Jun 22 03:24:47 2018 -0400 +++ b/macros.xml Mon Jan 28 11:22:18 2019 -0500 |
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| @@ -5,6 +5,12 @@ <requirement type="package" version="@VERSION@">emboss</requirement> </requirements> </xml> + <xml name="stdio"> + <stdio> + <regex level="fatal_oom" match="insufficient memory available" source="both" /> + <exit_code range="1:" /> + </stdio> + </xml> <xml name="citations"> <citations> <citation type="doi">10.1016/S0168-9525(00)02024-2</citation> |