Repository 'bam_to_sam'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam

Changeset 10:2b7acdca5fe1 (2025-06-19)
Previous changeset 9:3c661e57a88f (2024-09-08) Next changeset 11:69aa7277b44c (2025-06-27)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/bam_to_sam commit c508c3af0f4121dcc38e0be63db00a604e997b8a
modified:
bam_to_sam.xml
macros.xml
b
diff -r 3c661e57a88f -r 2b7acdca5fe1 bam_to_sam.xml
--- a/bam_to_sam.xml Sun Sep 08 03:24:55 2024 +0000
+++ b/bam_to_sam.xml Thu Jun 19 12:57:55 2025 +0000
b
@@ -1,4 +1,4 @@
-<tool id="bam_to_sam" name="BAM-to-SAM" version="2.0.4" profile="@PROFILE@">
+<tool id="bam_to_sam" name="BAM-to-SAM" version="2.0.5" profile="@PROFILE@">
     <description>convert BAM to SAM</description>
 
     <macros>
b
diff -r 3c661e57a88f -r 2b7acdca5fe1 macros.xml
--- a/macros.xml Sun Sep 08 03:24:55 2024 +0000
+++ b/macros.xml Thu Jun 19 12:57:55 2025 +0000
[
@@ -11,8 +11,8 @@
          please only bump the minor version in order to let the requirement
          version catch up eventually). To find the tools check:
         `grep "<tool" . -r | grep -v VERSION_SUFFIX | cut -d":" -f 1` -->
-    <token name="@TOOL_VERSION@">1.20</token>
-    <token name="@VERSION_SUFFIX@">2</token>
+    <token name="@TOOL_VERSION@">1.21</token>
+    <token name="@VERSION_SUFFIX@">0</token>
     <token name="@PROFILE@">22.05</token>
     <token name="@FLAGS@"><![CDATA[
         #set $flags = 0
@@ -220,6 +220,7 @@
     <xml name="citations">
         <citations>
             <citation type="doi">10.1093/gigascience/giab008</citation>
+            <citation type="doi">10.1093/bioinformatics/btr076</citation>
         </citations>
     </xml>
     <xml name="version_command">