Repository 'bcftools'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bcftools

Changeset 2:e5e78d1e09a6 (2014-08-14)
Previous changeset 1:e88316dc99b5 (2014-08-14)
Commit message:
Uploaded
modified:
bcftools_macros.xml
bcftools_view.xml
b
diff -r e88316dc99b5 -r e5e78d1e09a6 bcftools_macros.xml
--- a/bcftools_macros.xml Thu Aug 14 11:50:31 2014 -0400
+++ b/bcftools_macros.xml Thu Aug 14 12:19:22 2014 -0400
b
@@ -6,7 +6,7 @@
     </xml>
 
     <xml name="version_command">
-        <version_command>@EXECUTABLE@ 2>&amp;1 | head -n 3 | tail -n 1</version_command>
+        <version_command>bcftools 2>&amp;1 | head -n 3 | tail -n 1</version_command>
     </xml>
 
     <xml name="stdio">
b
diff -r e88316dc99b5 -r e5e78d1e09a6 bcftools_view.xml
--- a/bcftools_view.xml Thu Aug 14 11:50:31 2014 -0400
+++ b/bcftools_view.xml Thu Aug 14 12:19:22 2014 -0400
b
@@ -4,11 +4,11 @@
     <expand macro="version_command" />
     <expand macro="stdio" />
     <macros>
-        <token name="@EXECUTABLE@">bcftools</token>
+        <token name="@EXECUTABLE@">view</token>
         <import>bcftools_macros.xml</import>
     </macros>
     <command>
-        @EXECUTABLE@ view
+        bcftools @EXECUTABLE@
             $A
             $varsitesonly
             $snpcalling