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Commit message:
Imported from capsule None |
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added:
tool_dependencies.xml |
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| diff -r 000000000000 -r 4c650e5219e0 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Jan 27 09:24:56 2014 -0500 |
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| @@ -0,0 +1,22 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="FastQC" version="0.10.1"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.10.1.zip</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + <action type="chmod"> + <file mode="755">$INSTALL_DIR/fastqc</file> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> + <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> + </action> + </actions> + </install> + <readme></readme> + </package> +</tool_dependency> \ No newline at end of file |