| Previous changeset 20:c42c2b540ced (2021-05-05) Next changeset 22:a30d21fd5319 (2021-07-22) |
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Commit message:
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 21707e9160aa5028dcf8fb762506790f8e085153-dirty" |
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modified:
scanpy-neighbours.xml |
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| diff -r c42c2b540ced -r 5ec3b715809c scanpy-neighbours.xml --- a/scanpy-neighbours.xml Wed May 05 12:11:28 2021 +0000 +++ b/scanpy-neighbours.xml Mon May 10 15:28:19 2021 +0000 |
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| @@ -1,5 +1,5 @@ <?xml version="1.0" encoding="utf-8"?> -<tool id="scanpy_compute_graph" name="Scanpy ComputeGraph" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@"> +<tool id="scanpy_compute_graph" name="Scanpy ComputeGraph" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> <description>to derive kNN graph</description> <macros> <import>scanpy_macros2.xml</import> @@ -58,6 +58,7 @@ <param name="use_rep" type="select" label="Use the indicated representation"> <option value="X_pca" selected="true">X_pca, use PCs</option> <option value="X">X, use normalised expression values</option> + <option value="X_diffmap"> X_diffmap, use diffusion map</option> </param> <param name="n_pcs" argument="--n-pcs" type="integer" value="50" optional="true" label="Number of PCs to use"/> <param name="knn" argument="--knn" type="boolean" truevalue="" falsevalue="--no-knn" checked="true" |