| Previous changeset 6:2851c368b879 (2019-12-02) Next changeset 8:cd31c11bcc25 (2020-12-08) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit ff56a4c9218ddea84ff5cd72fd98c62db212465d" |
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modified:
macros.xml seq.error.xml |
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| diff -r 2851c368b879 -r c8a364414b34 macros.xml --- a/macros.xml Mon Dec 02 06:37:58 2019 -0500 +++ b/macros.xml Thu Nov 05 23:16:49 2020 +0000 |
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| @@ -15,7 +15,7 @@ <exit_code range="1:" level="fatal"/> </stdio> </xml> - <token name="@SHELL_OPTIONS@">set -o pipefail;</token> + <token name="@SHELL_OPTIONS@">set -o pipefail; export TERM=vt100; </token> <!-- Input parameters --> |
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| diff -r 2851c368b879 -r c8a364414b34 seq.error.xml --- a/seq.error.xml Mon Dec 02 06:37:58 2019 -0500 +++ b/seq.error.xml Thu Nov 05 23:16:49 2020 +0000 |
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| @@ -163,7 +163,7 @@ **Command Documentation** The seq.error_ command evaluates error rate for sequences by comparing to the fasta-formatted template_alignment_. -This is demonstrated in https://www.mothur.org/wiki/Schloss_SOP#Error_analysis +This is demonstrated in https://mothur.org/wiki/miseq_sop/#assessing-error-rates .. _template_alignment: https://www.mothur.org/wiki/Alignment_database .. _seq.error: https://www.mothur.org/wiki/Seq.error |