| Previous changeset 7:6b83059e8f34 (2020-05-29) Next changeset 9:771cffc56c87 (2020-06-14) |
|
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/chira commit a69b18084d0a9ade4e29869f8b0e2ce5fc4e0b73" |
|
modified:
chira_map.xml macros.xml |
| b |
| diff -r 6b83059e8f34 -r b91f9fcd9fc7 chira_map.xml --- a/chira_map.xml Fri May 29 06:56:20 2020 -0400 +++ b/chira_map.xml Sat Jun 06 08:12:07 2020 -0400 |
| b |
| @@ -74,16 +74,16 @@ </param> <param name="seed_length1" type="integer" value="12" label="Seed length 1" min="1" help="Seed length for 1st mapping iteration. bwa-mem parameter -k"/> - <param name="seed_length2" type="integer" value="6" label="Seed length 2" min="1" + <param name="seed_length2" type="integer" value="16" label="Seed length 2" min="1" help="Seed length for 2nd mapping iteration. bwa-mem parameter -k"/> <param name="align_score1" type="integer" value="18" min="1" label="Minimum alignmnet score for 1st mapping iteration" help="bwa-mem parameter '-T'"/> - <param name="align_score2" type="integer" value="10" min="1" + <param name="align_score2" type="integer" value="16" min="1" label="Minimum alignmnet score for 2nd mapping iteration" help="bwa-mem parameter '-T'"/> <param name="match1" type="integer" value="1" label="Matching score for 1st mapping iteration"/> <param name="mismatch1" type="integer" value="4" label="Mismatch penalty for 1st mapping iteration"/> <param name="match2" type="integer" value="1" label="Matching score for 2nd mapping iteration"/> - <param name="mismatch2" type="integer" value="7" label="Mismatch penalty for 2nd mapping iteration"/> + <param name="mismatch2" type="integer" value="6" label="Mismatch penalty for 2nd mapping iteration"/> <param name="gapo1" type="integer" value="6" label="Gap opening penalty for 1st mapping iteration"/> <param name="gape1" type="integer" value="1" label="Gap extension penalty for 1st mapping iteration"/> <param name="gapo2" type="integer" value="100" label="Gap opening penalty for 2nd mapping iteration"/> |
| b |
| diff -r 6b83059e8f34 -r b91f9fcd9fc7 macros.xml --- a/macros.xml Fri May 29 06:56:20 2020 -0400 +++ b/macros.xml Sat Jun 06 08:12:07 2020 -0400 |
| b |
| @@ -1,6 +1,6 @@ <macros> <token name="@WRAPPER_VERSION@">@TOOL_VERSION@+galaxy</token> - <token name="@TOOL_VERSION@">1.3.1</token> + <token name="@TOOL_VERSION@">1.3.3</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">chira</requirement> |