Repository 'fastqc'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/fastqc

Changeset 24:2c64fded1286 (2024-08-06)
Previous changeset 23:5ec9f6bceaee (2023-06-08)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit cd51396b097cf63734578cdac8fc6c64500c8b4b
modified:
rgFastQC.xml
b
diff -r 5ec9f6bceaee -r 2c64fded1286 rgFastQC.xml
--- a/rgFastQC.xml Thu Jun 08 20:02:11 2023 +0000
+++ b/rgFastQC.xml Tue Aug 06 06:12:08 2024 +0000
b
@@ -1,4 +1,4 @@
-<tool id="fastqc" name="FastQC" version="0.74+galaxy0">
+<tool id="fastqc" name="FastQC" version="0.74+galaxy1" profile="23.0">
     <description>Read Quality reports</description>
     <xrefs>
         <xref type="bio.tools">fastqc</xref>
@@ -50,6 +50,7 @@
                 --limits '${limits}'
             #end if
             --threads \${GALAXY_SLOTS:-2}
+            --dir \${TEMP:-\$_GALAXY_JOB_TMP_DIR} 
             --quiet
             --extract
             #if $min_length: