| Previous changeset 15:2b0c9d9fc6ca (2017-11-24) Next changeset 17:c15237684a01 (2018-06-01) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 9a987a679243f52297c465180da0bb557a3d0fa7 |
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modified:
rgFastQC.xml test-data/fastqc_data.txt test-data/fastqc_data2.txt test-data/fastqc_report.html test-data/fastqc_report2.html |
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| diff -r 2b0c9d9fc6ca -r ff9530579d1f rgFastQC.xml --- a/rgFastQC.xml Fri Nov 24 08:18:41 2017 -0500 +++ b/rgFastQC.xml Sun Jan 14 09:31:51 2018 -0500 |
| [ |
| @@ -1,7 +1,7 @@ -<tool id="fastqc" name="FastQC" version="0.70"> +<tool id="fastqc" name="FastQC" version="0.71"> <description>Read Quality reports</description> <requirements> - <requirement type="package" version="0.11.5">fastqc</requirement> + <requirement type="package" version="0.11.6">fastqc</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ #import re @@ -23,7 +23,6 @@ #set format = 'fastq' #end if - ln -s '${input_file}' '${input_file_sl}' && mkdir -p '${html_file.files_path}' && fastqc @@ -63,30 +62,30 @@ <param name="input_file" value="1000gsample.fastq" /> <param name="contaminants" value="fastqc_contaminants.txt" ftype="tabular" /> <output name="html_file" file="fastqc_report.html" ftype="html" lines_diff="100"/> - <output name="text_file" file="fastqc_data.txt" ftype="txt" lines_diff="2"/> + <output name="text_file" file="fastqc_data.txt" ftype="txt" lines_diff="4"/> </test> <test> <param name="input_file" value="1000gsample.fastq" /> <param name="limits" value="fastqc_customlimits.txt" ftype="txt" /> <output name="html_file" file="fastqc_report2.html" ftype="html" compare="sim_size" delta="4096"/> - <output name="text_file" file="fastqc_data2.txt" ftype="txt" lines_diff="2"/> + <output name="text_file" file="fastqc_data2.txt" ftype="txt" lines_diff="4"/> </test> <test> <param name="input_file" value="1000gsample.fastq.gz" ftype="fastq.gz" /> <param name="contaminants" value="fastqc_contaminants.txt" ftype="tabular" /> <output name="html_file" file="fastqc_report.html" ftype="html" lines_diff="100"/> - <output name="text_file" file="fastqc_data.txt" ftype="txt" lines_diff="2"/> + <output name="text_file" file="fastqc_data.txt" ftype="txt" lines_diff="4"/> </test> <test> <param name="input_file" value="1000gsample.fastq.bz2" ftype="fastq.bz2" /> <param name="contaminants" value="fastqc_contaminants.txt" ftype="tabular" /> <output name="html_file" file="fastqc_report.html" ftype="html" lines_diff="100"/> - <output name="text_file" file="fastqc_data.txt" ftype="txt" lines_diff="2"/> + <output name="text_file" file="fastqc_data.txt" ftype="txt" lines_diff="4"/> </test> <test> <param name="input_file" value="hisat_output_1.bam" ftype="bam" /> <output name="html_file" file="fastqc_report_hisat.html" ftype="html" lines_diff="100"/> - <output name="text_file" file="fastqc_data_hisat.txt" ftype="txt" lines_diff="2"/> + <output name="text_file" file="fastqc_data_hisat.txt" ftype="txt" lines_diff="4"/> </test> </tests> <help> |
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| diff -r 2b0c9d9fc6ca -r ff9530579d1f test-data/fastqc_data.txt --- a/test-data/fastqc_data.txt Fri Nov 24 08:18:41 2017 -0500 +++ b/test-data/fastqc_data.txt Sun Jan 14 09:31:51 2018 -0500 |
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| @@ -1,7 +1,7 @@ -##FastQC 0.11.5 +##FastQC 0.11.6 >>Basic Statistics pass #Measure Value -Filename 1000gsample_fastq_bz2_dat.bz2 +Filename 1000gsample_fastq_bz2.bz2 File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5000 @@ -929,6 +929,5 @@ 40 1.22 0.0 0.0 0.0 0.0 41 1.38 0.0 0.0 0.0 0.0 42 1.48 0.0 0.0 0.0 0.0 +43 1.68 0.0 0.0 0.0 0.0 >>END_MODULE ->>Kmer Content pass ->>END_MODULE |
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| diff -r 2b0c9d9fc6ca -r ff9530579d1f test-data/fastqc_data2.txt --- a/test-data/fastqc_data2.txt Fri Nov 24 08:18:41 2017 -0500 +++ b/test-data/fastqc_data2.txt Sun Jan 14 09:31:51 2018 -0500 |
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| @@ -1,4 +1,4 @@ -##FastQC 0.11.5 +##FastQC 0.11.6 >>Basic Statistics pass #Measure Value Filename 1000gsample_fastq @@ -5311,6 +5311,7 @@ 40 1.22 0.0 0.0 0.0 0.0 41 1.38 0.0 0.0 0.0 0.0 42 1.48 0.0 0.0 0.0 0.0 +43 1.68 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content pass >>END_MODULE |
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| diff -r 2b0c9d9fc6ca -r ff9530579d1f test-data/fastqc_report.html --- a/test-data/fastqc_report.html Fri Nov 24 08:18:41 2017 -0500 +++ b/test-data/fastqc_report.html Sun Jan 14 09:31:51 2018 -0500 |
| [ |
| b'@@ -1,4 +1,4 @@\n-<html><head><title>1000gsample_fastq_bz2_dat.bz2 FastQC Report</title><style type="text/css">\r\n+<html><head><title>1000gsample_fastq_bz2.bz2 FastQC Report</title><style type="text/css">\r\n @media screen {\r\n div.summary {\r\n width: 18em;\r\n@@ -184,4 +184,4 @@\n padding-top: 0;\r\n margin-top: 0;\r\n }\r\n-</style></head><body><div class="header"><div id="header_title"><img src="data:image/png;base64,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" alt="FastQC"/>FastQC Report</div><div id="header_filename">Thu 16 Nov 2017<br/>1000gsample_fastq_bz2_dat.bz2</div></div><div class="summary"><h2>Summary</h2><ul><li><img src="data:image/png;base64,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" alt="[PASS]"/><a href="#M0">Basic Statistics</a></li><li><img src="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr'..b'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" alt="Adapter graph" width="800" height="600"/></p></div></div><div class="footer">Produced by <a href="http://www.bioinformatics.babraham.ac.uk/projects/fastqc/">FastQC</a> (version 0.11.6)</div></body></html>\n\\ No newline at end of file\n' |
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| diff -r 2b0c9d9fc6ca -r ff9530579d1f test-data/fastqc_report2.html --- a/test-data/fastqc_report2.html Fri Nov 24 08:18:41 2017 -0500 +++ b/test-data/fastqc_report2.html Sun Jan 14 09:31:51 2018 -0500 |
| [ |
| b'@@ -184,4 +184,4 @@\n padding-top: 0;\r\n margin-top: 0;\r\n }\r\n-</style></head><body><div class="header"><div id="header_title"><img src="data:image/png;base64,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" alt="FastQC"/>FastQC Report</div><div id="header_filename">Thu 16 Nov 2017<br/>1000gsample_fastq</div></div><div class="summary"><h2>Summary</h2><ul><li><img src="data:image/png;base64,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" alt="[PASS]"/><a href="#M0">Basic Statistics</a></li><li><img src="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr0AAAEpklEQVR42s1XfUyUdRz/URrktNpaW/aHW1LLNdN0+U9WSzdfcq31/uLrWvZP+Y/2T+mc54GplSCOt4CBgqicpICGwokvSYkc3B3nQJxmBSo0K6fsiJe759Pn+zzccRx3xyGwvO07fvye5/f9fH7f90cBUP+nDP+QSd1XZ1LT6hPU/FqzWi4ia9mTZ2NGwLZZvUag/Dqzul2XoDzOROVu3KI6RGQte/JM3pF3R41AbaJ6pT5RNdgT1L+tyXGezpJFgM0MNGYDV34'..b'5o4dfOPrci0fnvnf0yEtHn3/58NxL7bdLn/rh6x/9xen/7fzb089qv1361KvvfsqrnX9LoeyK8t7bxX853ovAOu7aMw88dxv05s2bN2/evHkr+vb0w88fT74tBFbn/u2fnz186DtJb5fuvfz6R39++n99ik/xKVU/5eiz3z16+Pmjz71wdO7Fo0e+d/T5d/+X4vmOt0uf/uHrf/OL0//b+bc+xaf4FJ8y8ae897YvZ7DMzMzM9nYCy8zMzKxaYK2K/hShmZmZmcD6/64q9XuwzMzMzARWZSar2zKCL7sR4z+lObtKd0LT2tzusbwbW9YKXFrZ35obvi1TKuN/f8oE91jfpRU/0vqu85S3ZUql4GG2xXvMV3/ZX/3Ob6mVzt1Mc1vmHlh3bnneB0feWWNeRpYUMSNve8YlVLr567e6xuHYd5nFY67gkZCtTPPfSL3bUun3DHc+Aha/rwLXv+Cv9Kv330vkw12921Lvt0xP8NVf9b++pewvdJzgq1/vYTNwW2rcrr7/uVg1sOb2UvL5Btb4z006ixP/8VWvyZhPzwus2kf/VgJrsiiZ+L+RSt+cah8J0zzqTXywVX3s7jvFWEnx1ffVr/FoWfsxc/Abt8DafmCl/jeT98zdasQ5UoE157M+xZ/0FFi78i223pMRAstXf3e/+oFvqWXPkA1epsAq/4kZL0Ia03AZz8RlP1WaFH+p13+yR4rJAmvi9KmUcVUfmyY4ErZ15q/SKwurfvW38v210lc/8JrCsrdiu6/1nOAeW1V45q7qV3/rgeU1WHPJspEvjZrgRFFGKSZ94vqx6AzWnJUJvoUXPxKmb4V63HaVCV62WOlxYJFnsKb/6lS9xwp+9cPfUiu9/nKCx8xlBlbtZxXH/5hG1cAak2LTv1ZMYLnHfPXdYwJrn++x8LfU4ucUB08uCqxaH1+Jy/jxxlXPj2xsPbDGn8Dbif/BN8GL3Gs/RTjlPbaAU3FluUGl7BMr273H/BRhqlLkl6fM5B5bwKm4fQyskb/Sqeovgso7sTTBr5vKfk1Y3hWb5ite79e61PttKHNQJvgvsdIv9Wm/wqPSPdZ3mC1AqfTVr/drirb4u6NWk/werCmVSg/L03wXqPfVD0TVnr4Gy8zMzGwfJrDMzMzMBJaZmZmZwDIzMzMTWGZmZmYmsMzMzMwElpmZmZnAMjMzMzOBZWZmZiawzMzMzASWmdmCHhD7/y3Ivn/tLuYy5/CvdpiZwDKzug0x/p/rqvRv6xa8kOKBNebqCSwzgWVmyw+sgt/7F5YOAsvMBJaZFQ6svjNb7Xe+9+f2xw9e2sYnhq9h/AdvXIfwrQi8v1OJ/Pjw5WgsM4FlZvsYWO1G6Wymvj/EX9rg2aDUD25XTvhWxFzPwcBKupkCy0xgmdnyAytwbinQUjF/m/3+8R8c/ymViLxrYmYCy8wWElgx7+988msnAivpKTyBZWYCy8y2E1iBmJj5GayRVSSwzExgmdnYwJrmNVi1A2vwTFv8C6c6lYzXYKkrM4FlZnsaWKv0nyJs/1XkTxHWC6zIWxH/03/h2xV5OQLLTGCZmVl3euaVq9/kbiawzMwsP8LcCWYmsMzMBJaZCSwzMzMzgWVmZma2n/s/ih0UoBaOfPUAAAAASUVORK5C" alt="Adapter graph" width="800" height="600"/></p></div><div class="module"><h2 id="M11"><img src="data:image/png;base64,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" alt="[OK]"/>Kmer Content</h2><p>No overrepresented Kmers</p></div></div><div class="footer">Produced by <a href="http://www.bioinformatics.babraham.ac.uk/projects/fastqc/">FastQC</a> (version 0.11.6)</div></body></html>\n\\ No newline at end of file\n' |