| Previous changeset 77:1fa49a9a4ec5 (2020-11-16) Next changeset 79:2d0272e730d1 (2020-11-17) |
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Commit message:
Uploaded |
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modified:
toolfactory/rgToolFactory2.py |
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| diff -r 1fa49a9a4ec5 -r 89aca6c67405 toolfactory/rgToolFactory2.py --- a/toolfactory/rgToolFactory2.py Mon Nov 16 23:24:05 2020 +0000 +++ b/toolfactory/rgToolFactory2.py Tue Nov 17 06:04:40 2020 +0000 |
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| @@ -1,4 +1,4 @@ -#!/usr/bin/python3 + # rgToolFactory.py # see https://github.com/fubar2/toolfactory # @@ -882,6 +882,7 @@ planemo test --engine docker_galaxy --database_type docker_postgres --galaxy_root /galaxy-central pyrevpos/pyrevpos.xml """ xreal = "%s.xml" % self.tool_name + tool_test_path = os.path.join(self.repdir,f"{self.tool_name}_planemo_test_report.html") if os.path.exists(self.tlog): tout = open(self.tlog, "a") else: @@ -891,25 +892,30 @@ cll = [ "planemo", "test", + "--test_output_xunit",os.path.join(self.repdir,f"{self.tool_name}_xunit.xml") + "--test_data", os.path.abspath(self.testdir), + "--test_output", os.path.abspath(tool_test_path), "--galaxy_root", self.args.galaxy_root, "--update_test_data", - xreal, + os.path.abspath(xreal), ] p = subprocess.run( cll, shell=False, cwd=self.tooloutdir, - stderr=dummy, - stdout=dummy, + stderr=tout, + stdout=tout, ) else: cll = [ "planemo", "test", + "--test_data", self.testdir, + "--test_output", tool_test_path, "--galaxy_root", self.args.galaxy_root, - xreal, + os.path.abspath(xreal), ] p = subprocess.run( cll, shell=False, cwd=self.tooloutdir, stderr=tout, stdout=tout |